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The roots of Citrus sinensis have yielded a flavanoid glycoside. The compound was characterized as dihydrokaempferol 7,4’-dimethyl ether-3-O-α-rhamnopyranosyl(1”’→ 6”)-β-glucopyranoside on the basis of U.V, I.R and N.M.R (1H, 13C).
Lepidium latifolium L., a weed distributed in the Ladakh region of Himalayan range, belongs to Brassicaceae family and reported to withstand low temperature stress <-20°C. RACE primers were designed from EST encoding Ras-related GTP-binding like protein (FG618354) from L. latifolium and full-length LlaRan (GU014818) was obtained. Its cDNA sequence consisted of 672 bp long open-reading frame, 5'UTR of 95 bp and 3'UTR of 115 bp, respectively. The predicted Lepidium RAN protein encodes a 223 aa protein of 25.59 kDa and pI 6.08. In silico characterization of LlaRan suggested that it has a universal RAN domain across species and likely to follow similar functions. Transcript accumulation studies in response to cold stress suggested that it is an early down-regulated gene but a late upregulated gene. Quantitative analysis using real-time PCR revealed differential regulation of the transcript not only under cold stress but also under the effect of stress regulators like jasmonic acid, salicylic acid, calcium, abscisic acid and ethylene which suggests a possible crosstalk between different pathways where LlaRan may have an important role to play. Thus, LlaRan is a candidate gene for engineering plants against abiotic stresses after its further functional validation in model plants.
Suppression subtraction hybridization (SSH) libraries were constructed from RNA isolated from leaves of control and cold stress-induced Lepidium latifolium, a cold-tolerant plant species from high altitudes for isolation of cold-responsive genes. A total of 500 clones were obtained from the cold stress library. Dot blot expression analysis identified 157 clones that were upregulated and 75 that were downregulated during cold stress. These clones selected on the basis of their expression patterns on dot blot were sequenced. As much as 27 and 17 genes were identified from the forward and reverse libraries, respectively. The genes identified revealed homology with genes involved in diverse processes such as gene regulation/signaling, photosynthesis, DNA damage repair protein, pathogenesis-related protein, senescence-associated proteins and proteins with unknown functions.
Rhizobacteria are an active part of microbial population in the rhizosphere of plants. In this study, twenty rhizobacteria were isolated from the rhizosphere of a perennial grass, Haloxylon salicornicum, found in Cholistan desert, an arid landmass near Bahawalpur Pakistan, in one set of experimental conditions. Colony characteristics, biochemical and molecular analyses of these isolates were performed. All isolates were bacilli, gram positive with off-white colonies and exhibited typical bacilli colony morphology. None of the isolates was gelatinase, urease, indole, H2S and catalase producer. Eleven isolates were amylase producers and 8 isolates were acid producers. All isolates fermented glucose, 3 fermented lactose and 19 fermented fructose. Molecular data revealed that out of twenty isolates, 14 isolates showed 91–99% identity with Brevibacillus borstelensis, 4 with Bacillus subtilis (97–98%) and 2 with Bacillus licheniformis (94–99%) through BLAST analysis. All identified bacterial isolates cladded with their respective groups in the phylogenetic tree. Many (11–15 out of 20) of the isolates were more effective in inhibiting growth of the tested bacterial strains as compared to the positive control (Ampicillin 50 μg/disc). We conclude that bacilli are the predominant form populating rhizosphere of this desert grass. Among the isolated bacteria Brevibacillus borstelensis, Bacillus subtilis and Bacillus licheniformis are the most predominant species.
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