Wyniki wyszukiwania

1

Prostatic acid phosphatase: structural aspects of inhibition by L-[plus]-tartrate ions

100%

Lovelace L., Lewinski K., Jakob C. G., Kuciel R., Ostrowski W., Lebioda L.

Acta Biochimica Polonica

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1997

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tom 44

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nr 4

The crystal structure of the complex between rat-prostatic acid phosphatase (PAP) and L-(+)-tartrate (Lindqvist et al., J. Biol. Chem., 1993, 268, 20744-20746) contains the model of the ligand with incorrect chirality. We report here the correct model and discuss the relation between this model and the model of the inhibitory complexes between PAP and oxy-anions.

2

Crystal structure F-actin binding domain from human beta-spectrin

100%

Djinovic Carugo K., Banuelos S., Saraste M.

Cellular and Molecular Biology Letters

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1998

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tom 03

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nr 2

3

Structural studies of cloned segments of chicken brain alpha-spectrin

100%

Grum V. L., Li D., MacDonald R. I., Mondragon A., Pantazatos D. P.

Cellular and Molecular Biology Letters

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1998

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tom 03

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nr 2

4

Selectivity of 4,5,6,7-tetrabromobenzimidazole [TBBZ] as an ATP-competitive potent inhibitor of protein kinase CK2 from various sources

88%

Zien P., Bretner M., Zastapilo K., Szyszka R., Shugar D.

Cellular and Molecular Biology Letters

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2003

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tom 08

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nr 2A

5

Crystal structure and function of 14-3-3 proteins: Role in coordinating signal transduction pathways

88%

Aitken A., Chaudhri M., Dubois T., Howell S., Kerai P., Scarabel M., Soneji Y., Rittinger K.

Cellular and Molecular Biology Letters

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1997

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tom 02

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nr 2

6

Conformational diversity of catalytic sites of protein kinases

88%

Karlsson R. G., Sowadski J.

Cellular and Molecular Biology Letters

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1998

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tom 03

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nr 3

7

Strategies for the discovery of novel inhibitors of cyclin-dependent kinases

75%

Zaharevitz D., Gussio R., Meijer L., Leost M., Kunick C., Schultz C., Senderowicz A., Lahusen T., Sausville E.

Cellular and Molecular Biology Letters

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1998

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tom 03

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nr 3

8

Crystal structures of some acyclonucleosides with antiviral activity and related compounds

75%

Birnbaum K. B.

Acta Biochimica Polonica

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1996

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tom 43

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nr 1

The crystal structure of the acyclonucleoside, 9-[4-hydroxy-2-(hydroxymethyl)- butyljguanine (2HM-HBG), has been compared with related acyclonucleosides, and that of the acyclonucleotide, 9-1(1,3-dihydroxy-2-propoxy)methyl]guanine-3',5'-cyclic phosphate (DlIPG-cMP), also with its parent second messenger cGMP and cyclic monophosphate nucleotides. There is considerable conformational flexibility in the acyclic chain of these compounds with several conformations coexisting in the solid state. This flexibility together with the narrow range of the glycosidic torsion angles (from 69° to 94°, with an average of 83(3)° for 11 molecules when the aglycon is guanine, and from 92° to 108° with an average of 103(3)° for 4 molecules when the aglycon is adenine) may be essential for the antiviral activity of these compounds and their ability to act as substrates. The mechanism of antiviral activity of, 9-1(1,3-dihydro- xy-2-propoxy)methyllguanine-3',5'-cyclic phosphate is different from that of the acyclonucleosides, and is discussed in the light of it being a close structural analogue to the second messenger cGMP.

9

Molecular recognition motifs in cytidinium and 2'-deoxycytidinium salts with composite anions

75%

Gilski M., Jaskolski M.

Acta Biochimica Polonica

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1998

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tom 45

|

nr 4

In the crystal structures of N3-protonated cytidinium and 2'-deoxycytidinium salts with composite XYn anions capable of accepting hydrogen bonds through their Y atoms, the dominating motif of cytosinium...anion interactions consists of a pair of hydrogen bonds donated from the N3+-H protonation site and from the exoamino N4-H41 group cis to N3, and accepted by two Y centers of one anion. This multi-point recognition pattern is stable and robust and thus can be classified as a supramolecular synthon. In a broader group of N3-protonated, N1-substituted cytosinium salts with composite anions it occurs with 70% frequency. The C5 side of the cytosine ring mimics the N3+-H type synthon and shows a propensity to form an analogous motif in which a C5-H5...Y hydrogen bond replaces the strong N3+-H...Y interaction. Since the C-H...Y bond is much weaker, the secondary motif shows higher deformability and is less frequent (44%).

10

A comparison between the crystal and solution structures of Escherichia coli asparaginase II

75%

Kozak M., Jurga S.

Acta Biochimica Polonica

|

2002

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tom 49

|

nr 2

The small angle X-ray scattering (SAXS) pattern of the homotetrameric asparaginase II from Escherichia coli was measured in solution in conditions resembling those in which its crystal form was obtained and compared with that calculated from the crystallographic model. The radius of gyration measured by SAXS is about 5% larger and the maximum dimension in the distance distribution function about 12% larger than the corresponding value calculated from the crystal structure. A comparison of the experimental and calculated distance distribution functions suggests that the overall quaternary structure in the crystal and in solution are similar but that the homotetramer is less compact in solution than in the crystal.

11

Crystal structure of the alpha-actinin rod: four spectrin repeats forming a tight dimer

75%

Ylanne J., Scheffzek K., Young P., Saraste M.

Cellular and Molecular Biology Letters

|

2001

|

tom 06

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nr 2

12

Artykuł dostępny w postaci pełnego tekstu - kliknij by otworzyć plik

Inorganic pyrophosphatase (PPase) from a higher plant

63%

Grzechowiak M., Sikorski M., Jaskolski M.

BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology

|

2013

|

tom 94

|

nr 1

13

Hyp-1 protein from St John’s wort as a PR-10 protein

63%

Sliwiak J., Dauter Z., Jaskolski M.

BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology

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2013

|

tom 94

|

nr 1

14

Study of the properties of vegan ice cream based on almond drink

63%

Kot A., Kaminska-Dworznicka A., Baranska A.

Zeszyty Problemowe Postępów Nauk Rolniczych

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2020

|

tom 600

15

Structural enzymology at the legume-microbe interface: S-adenosyl-L-homocysteine hydrolase of rhizobia

63%

Manszewski T., Singh K., Imiolczyk B., Jaskolski M.

BioTechnologia. Journal of Biotechnology Computational Biology and Bionanotechnology

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2013

|

tom 94

|

nr 1

16

Scolicidal effects of chitosan–curcumin nanoparticles on the hydatid cyst protoscolices

63%

Napooni S., Delavari M., Arbabi M., Barkheh H., Rasti S., Hooshyar H., Mashkani S. M. H.

Acta Parasitologica

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2019

|

tom 64

|

nr 2

17

Crystal structure of products of enzymatic interesterification of rapeseed oil with fats being palmitic acid carriers

63%

Ledochowska E.

Polish Journal of Food and Nutrition Sciences

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1999

|

tom 08

|

nr 4

The samples containing rapeseed oil and palm stearin, both initial blends and interesterified products, crystallised in the ß form. The partial substitution of palm stearin for hydrogenated palm stearin caused that besides the ß crystal form also ß crystal form occurred in the reaction products. The amount of the ß form was the greater, the more palm stearin was replaced with partially hydrogenated stearin. The presence of trans isomers, but not the sample content of palmitic acid, was the main factor that delayed the ß to ß transition. In addition, the amount of ß crystal form was found to be greater in products containing partial acylglycerols (mostly diacylglycerols) besides triacylglycerols than in pure respective triacylglycerols.

18

Structure and functions of 5S rRNA

63%

Barciszewska M. Z., Szymanski M., Erdmann V. A., Barciszewski J.

Acta Biochimica Polonica

|

2001

|

tom 48

|

nr 1

The ribosome is a macromolecular assembly that is responsible for protein biosynthesis in all organisms. It is composed of two-subunit, ribonucleoprotein particles that translate the genetic material into an encoded polypeptides. The small subunit is the site of codon-anticodon interaction between the messenger RNA (mRNA) and transfer RNA (tRNA) substrates, and the large subunit catalyses peptide bond formation. The peptidyl- transferase activity is fulfilled by 23S rRNA, which means that ribosome is a ribozyme. 5S rRNA is a conserved component of the large ribosomal subunit that is thought to enhance protein synthesis by stabilizing ribosome structure. This paper shortly summarises new results obtained on the structure and function of 5S rRNA.

19

cAMP-dependent protein kinase: dynamics of catalysis and docking

63%

Taylor S. S., Akamine P., Yang J., Wu J., Iyer G., Anand G., Valiev M., Weare J. H., Johnson D. D.

Cellular and Molecular Biology Letters

|

2003

|

tom 08

|

nr 2A

20

Crystal structure of an altered catalytic subunit of cAMP-dependent protein kinase in complex with the PKC-kinase inhibitor bisindolyl-maleimide 2 in two different conformations - implications for selectivity

63%

Gabel M., Breitenlechner C. B., Engh R. A., Bossemeyer D.

Cellular and Molecular Biology Letters

|

2003

|

tom 08

|

nr 2A

Ograniczanie wyników

Prostatic acid phosphatase: structural aspects of inhibition by L-[plus]-tartrate ions

Crystal structure F-actin binding domain from human beta-spectrin

Structural studies of cloned segments of chicken brain alpha-spectrin

Selectivity of 4,5,6,7-tetrabromobenzimidazole [TBBZ] as an ATP-competitive potent inhibitor of protein kinase CK2 from various sources

Crystal structure and function of 14-3-3 proteins: Role in coordinating signal transduction pathways

Conformational diversity of catalytic sites of protein kinases

Strategies for the discovery of novel inhibitors of cyclin-dependent kinases

Crystal structures of some acyclonucleosides with antiviral activity and related compounds

Molecular recognition motifs in cytidinium and 2'-deoxycytidinium salts with composite anions

A comparison between the crystal and solution structures of Escherichia coli asparaginase II

Crystal structure of the alpha-actinin rod: four spectrin repeats forming a tight dimer

Inorganic pyrophosphatase (PPase) from a higher plant

Hyp-1 protein from St John’s wort as a PR-10 protein

Study of the properties of vegan ice cream based on almond drink

Structural enzymology at the legume-microbe interface: S-adenosyl-L-homocysteine hydrolase of rhizobia

Scolicidal effects of chitosan–curcumin nanoparticles on the hydatid cyst protoscolices

Crystal structure of products of enzymatic interesterification of rapeseed oil with fats being palmitic acid carriers

Structure and functions of 5S rRNA

cAMP-dependent protein kinase: dynamics of catalysis and docking

Crystal structure of an altered catalytic subunit of cAMP-dependent protein kinase in complex with the PKC-kinase inhibitor bisindolyl-maleimide 2 in two different conformations - implications for selectivity