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Phylogeography analysis and molecular evolution patterns of the nematode parasite Heligmosomum mixtum based on mitochondrial DNA sequences

100%

Sakka H., Henttonen G., Baraket G., Amel S.-H., Michaux J.

Acta Parasitologica

2015

tom 60

nr 1

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Using morfological characters and simple sequence repeat (SSR) markers to characterize Tunisian fig (Ficus caricaL.) cultivars

86%

Saddoud O., Baraket G., Chatti K., Trifi M., Marrakchi M., Mars M., Salhi-Hannachi A.

Acta Biologica Cracoviensia. Series Botanica

2011

tom 53

nr 2

We used simple sequence repeat markers and 25 morphological characters to characterize 18 Tunisian fig (Ficus carica L.) cultivars. Morphological traits suggested a high level of variation in the germplasm. Principal component analysis (PCA) differentiated the studied cultivars. In the derived dendrogram the cultivars clustered independently of their geographical origin and sex of trees. Simple sequence repeat (SSR) markers were used to compare genetic polymorphism with the observed phenotypic variation. Using six microsatellite primers, 39 alleles and 59 genotypes were identified. The high values of polymorphism information content (PIC), ranging from 0.67 to 0.85, confirmed the effectiveness of microsatellite analysis for determining molecular polymorphism and characterizing the studied cultivars. Multilocus genotyping unambiguously distinguished all the cultivars. The ability of each type of feature to differentiate cultivars of this crop is discussed.

Ograniczanie wyników

1 Acta Biologica Cracoviensia. Series Botanica

1 Acta Parasitologica

2 Baraket G.

1 Amel S.-H.

1 Chatti K.

1 Henttonen G.

1 Marrakchi M.

1 Mars M.

1 Michaux J.

1 Saddoud O.

1 Sakka H.

1 Salhi-Hannachi A.

1 Trifi M.

1 2015

1 2011

Wyniki wyszukiwania

Phylogeography analysis and molecular evolution patterns of the nematode parasite Heligmosomum mixtum based on mitochondrial DNA sequences

Using morfological characters and simple sequence repeat (SSR) markers to characterize Tunisian fig (Ficus caricaL.) cultivars