Understanding the microbial communities responses to biopile procedures is an essential step in the field of microbial ecology and in bioremediation applications. In order to estimate metabolic dynamics at a microbial community level, we used Biolog Ecoplates. Assays showed that the bacterial communities from all samples were capable of utilizing a great variety from the 31 carbon substrates. Shannon’s diversity index values were between 2.711±0.303 in August and 3.262±0.062 in April, recording a general variation of 0.5 that is similar to other studies. Statistical analysis showed a good correlation coeficient for 2-hydroxybenzoic acid, a compound that is metabolized through the nafhthalene degradation pathway. Results showed a metabolic shift of the microbial community determined by temperature and the decrease of aromatic hydrocarbon concentrations. The shift was observed in the dynamics of MPN from 9x10⁶ to 1x10⁹ cell/g of soil. Even if the initial total petroleum hydrocarbon concentration from the biopile matrix was much higher than in other studies (10.25 g/kg), at the end of the evaluation the pollutant content of the biopile matrix had a removal rate between 92-98% for monoaromatic hydrocarbons and 57-75% for poliaromatic hydrocarbons.