Metody biologii molekularnej wykorzystywane w diagnostyce zakażeń Mycoplasma synoviae u drobiu

• Autorzy: Kursa O. , Tomczyk G. , Sawicka A. , Minta Z.

Warianty tytułu

EN

Molecular methods used in the diagnosis of Mycoplasma synoviae infection in poultry

• Języki publikacji: PL

Abstrakty

EN

Diagnostics of Mycoplasma synoviae (MS) is generally based on serological, culturing and molecular methods. Rapid diagnosis and identification of infections is very important in the poultry industry. The use of PCR or real-time PCR makes it possible to shorten the time for obtaining results from research and the effective detection of genetic material of MS. There are many variations of the PCR method, one of them is the LAMP method, which is rapid, very sensitive and does not require specialist equipment. This article reviews the molecular methods used for the diagnosis of Mycoplasma synoviae infection in poultry.

Słowa kluczowe

PL

drob; mykoplazmozy; Mycoplasma synoviae; diagnostyka; metody molekularne; lancuchowa reakcja polimerazy; metoda PCR-RFLP; metoda RAPD-PCR; metoda real time PCR; metoda LAMP; elektroforeza kapilarna; metoda PCR-DGGE; metody serologiczne; test ELISA

• Wydawca: -
• Czasopismo: Medycyna Weterynaryjna
• Rocznik: 2016
• Tom: 72
• Numer: 01
• Opis fizyczny: s.18-21,bibliogr.

Twórcy

autor

Kursa O.

• Zakład Chorób Drobiu, Państwowy Instytut Weterynaryjny - Państwowy Instytut Badawczy w Puławach, Al. Partyzantów 57, 24-100 Puławy

autor

Tomczyk G.

• Zakład Chorób Drobiu, Państwowy Instytut Weterynaryjny - Państwowy Instytut Badawczy w Puławach, Al. Partyzantów 57, 24-100 Puławy

autor

Sawicka A.

• Zakład Chorób Drobiu, Państwowy Instytut Weterynaryjny - Państwowy Instytut Badawczy w Puławach, Al. Partyzantów 57, 24-100 Puławy

autor

Minta Z.

• Zakład Chorób Drobiu, Państwowy Instytut Weterynaryjny - Państwowy Instytut Badawczy w Puławach, Al. Partyzantów 57, 24-100 Puławy

Bibliografia

• Bayatzadeh M. A., Pourbakhsh S. A., Ashtari A., Abtin A. R., Abdoshah M.: Molecular typing of Iranian field isolates Mycoplasma synoviae and their differentiation from the live commercial vaccine strain MS-H using vlhA gene. Br. Poult. Sci. 2014, 55, 148-156.
• Ben-Abdelmoumen B., Roy R. S.: Antigenic relatedness between seven avian mycoplasma species as revealed by western blot analysis. Avian Dis. 1995, 39, 250-262.
• Bencina D., Drobnic-Valic M., Horvat S., Narat M., Kleven S. H., Dovc P.: Molecular basis of the length variation in the N-terminal part of Mycoplasma synoviae hemagglutinin. FEMS Microbiol. Lett. 2001, 203, 115-123.
• Charvalos E., Peteinaki E., Spyridaki I., Manetas S., Tselentis Y.: Detection of ciprofloxacin resistance mutations in Campylobacter jejuni gyrA by nonradioisotopic single-strand con-formation polymorphism and direct DNA sequencing. J. Clin. Lab. Anal. 1996, 10, 129-133.
• Fan H. H., Kleven S. H., Jackwood M. W., Johansson K. E., Pettersson B., Levisohn S.: Species identification of avian mycoplasmas by polymerase chain reaction and restriction fragment length polymorphism analysis. Avian Dis. 1995c, 39, 398-407.
• Feberwee A., de Vries T. S., Landman W. J.: Seroprevalence of Mycoplasma synoviae in Dutch commercial poultry farms. Avian Pathol. 2008, 37, 629-633.
• Feberwee A., de Wit J. J., Landman W. J.: Induction of eggshell apex abnormalities by Mycoplasma synoviae: field and experimental studies. Avian Pathol. 2009, 38, 77-85.
• Feberwee A., Dijkstra J. R., von Banniseht-Wysmuller T. E., Gielkens A. L., Wagenaar J. A.: Genotyping of Mycoplasma gallisepticum and M. synoviae by Amplified Fragment Length Polymorphism (AFLP) analysis and digitalized Random Amplified Polymorphic DNA (RAPD) analysis. Veterinary Microbiol. 2005, 111, 125-131.
• Ferguson-Noel N., Noormohammadi A. H.: Mycoplasma synoviae infection, [w:] Swayne D. E., Glisson J. R., McDougald L. R., Nolan L. K., Suarez D. L., Nair V. L. (eds.): Diseases of poultry, 13th edn. Wiley, Ames 2013, s. 900-906.
• Fraga A. P., de Vargas T., Ikuta N., Fonseca A. S., Celmer A. J., Marques E. K., Lunge V. R.: A multiplex real-time PCR for detection of Mycoplasma gallisepticum and Mycoplasma synoviae in clinical samples from Brazilian commercial poultry flocks. Braz. J. Microbiol. 2013, 44, 505-510.
• Fu S., Qu G., Guo S., Ma L., Zhang N., Zhang S., Gao S., Shen Z.: Applications of loop-mediated isothermal DNA amplification. Appl. Biochem. Biotechnol. 2011, 163, 845-850.
• Garcia M., Jackwood M. W., Levisohn S., Kleven S. H.: Detection of Mycoplasma gallisepticum, M. synoviae, and M. iowae by multi-species polymerase chain reaction and restriction fragment length poly-morphism. Avian Dis. 1995, 39, 606-616.
• Gundry C. N., Vandersteen J. G., Reed G. H., Pryor R. J., Chen J., Wittwer C. T.: Amplicon melting analysis with labeled primers: a closed-tube method for differentiating homozygotes and hetero-zygotes. Clin. Chem. 2003, 49, 396-406.
• Hammond P. P., Ramirez A. S., Morrow C. J., Bradbury J. M.: Development and evaluation of an improved diagnostic PCR for Mycoplasma synoviae using primers located in the haemagglutinin encoding gene vlhA and its value for strain typing. Vet. Microbiol. 2009, 136, 61-68.
• Hong Y., García M., Leiting V., Benčina D., Dufour-Zavala L., Zavala G., Kleven S. H.: Specific detection and typing of Mycoplasma synoviae strains in poultry with PCR and DNA sequence analysis targeting the hemagglutinin encoding gene vlhA. Avian Dis. 2004, 48, 606-616.
• Huang C. H., Lai G. H., Lee M. S., Lin W. H., Lien Y. Y., Hsueh S. C., Kao J. Y., Chang W. T., Lu T. C., Lin W. N., Chen H. J., Lee M. S.: Development and evaluation of a loop-mediated isothermal amplification assay for rapid detection of chicken anemia virus. J. Appl. Microbiol. 2010, 108, 917-924.
• Jeffery N., Gasser R. B., Steer P. A., Noormohammadi A. H.: Classification of Mycoplasma synoviae strains using single-strand conformation polymorphism and high-resolution melting-curve analysis of the vlhA gene single-copy region. Microbiology 2007, 153, 2679-2688.
• Kakuya F., Kinebuchi T., Fujiyasu H., Tanaka R., Kano H.: Genetic point-of-care diagnosis of Mycoplasma pneumonia infection using LAMP assay. Pediatr. Int. 2014, 56, 547-552.
• Kempf I.: DNA amplification methods for diagnosis and epidemiological investigations of avian mycoplasmosis. Acta Vet. Hung. 1997, 45, 373-386.
• Kleven S. H.: Mycoplasma synoviae, [w:] Saif Y. M. (ed.): Diseases of poultry. 11th edn., Iowa State University Press, Ames 2003, s. 756-765.
• Krypuy M., Newnham G. M., Thomas D. M., Conron M., Dobrovic A.: High resolution melting analysis for the rapid and sensitive detection of mutations in clinical samples: KRAS codon 12 and 13 mutations in non-small cell lung cancer. BMC Cancer 2006, 6, 295.
• Kursa O., Woźniakowski G., Tomczyk G., Sawicka A., Minta Z.: Rapid detection of Mycoplasma synoviae by loop-mediated isothermal amplification. Arch. Microbiol. 2015, 197, 319-325.
• Landman W. J.: Is Mycoplasma synoviae outrunning Mycoplasma gallisepticum? A viewpoint from the Netherlands. Avian Pathol. 2014, 43, 2-8.
• Lauerman L. H., Chilina A. R., Closser J. A., Johansen D.: Avian mycoplasma identification using polymerase chain reaction amplicon and restriction fragment length polymorphism analysis. Avian Dis. 1995, 39, 804-811.
• Lauerman L. H., Hoerr F. J., Sharpton A. R., Shah S. M., van Santen V. L.: Development and application of a polymerase chain reaction assay for Mycoplasma synoviae. Avian Dis. 1993, 37, 829-834.
• Mair G., Vilei E. M., Wade A., Frey J., Unger H.: Isothermal loop mediated amplification (LAMP) for diagnosis of contagious bovine pleuro-pneumonia. BMC Vet. Res. 2013, 9, 108.
• McAuliffe L., Ellis R., Ayling R., Nicholas R.: Differentiation of Mycoplasma Species by 16S Ribosomal DNA PCR and Denaturing Gradient Gel Electrophoresis Fingerprinting. J. Clin. Microbiol. 2003, 41, 4844-4847.
• Noormohammadi A. H., Markham P. F., Duffy M. F., Whithear K. G., Browning G. F.: Multigene families encoding the major hemagglutinins in phylogenetically distinct mycoplasmas. Infect. Immun. 1998, 66, 3479-3475.
• Noormohammadi A. H., Markham P. F., Kanci A., Whithear K. G., Browning G. F.: A novel mechanism for control of antigenic variation in the haemagglutinin gene family of Mycoplasma synoviae. Mol. Microbiol. 2000, 35, 911-923.
• Noormohammadi A. H., Markham P. F., Whithear K. G., Walker I. D., Gurevich V. A., Ley D. H., Browning G. F.: Mycoplasma synoviae has two distinct phasevariable major membrane antigens, one of which is a putative hemagglutinin. Infect. Immun. 1997, 65, 2542-2547.
• Notomi T., Okayama H., Masubuchi H., Yonekawa T., Watanabe K., Amino N.: Loop-mediated isothermal amplification of DNA. Nucleic Acids Res. 2000, 28, E63.
• Olson N. O., Shelton D. C., Bletner J. K., Munro D. A., Anderson G. C.: Studies of infectious synovitis in chickens. Am. J. Vet. Res. 1956, 17, 747-754.
• Ramirez A. S., Naylor C. J., Hammond P. P., Bradbury J. M.: Development and evaluation of a diagnostic PCR for Mycoplasma synoviae using primers located in the intergenic spacer region and the 23S rRNA gene. Vet. Microbiol. 2006, 118, 76-82.
• Ramirez A. S., Naylor C. J., Yavari C. A., Dare C. M., Bradbury J. M.: Analysis of the 16S to 23S rRNA intergenic spacer region of Mycoplasma synoviae field strains. Avian Pathol. 2011, 40, 79-86.
• Raviv Z., Kleven S. H.: The development of diagnostic real-time TaqMan PCRs for the four pathogenic avian mycoplasmas. Avian Dis. 2009, 53, 103-107.
• Reck C., Menin A., Canever M. F., Milettia L. C.: Rapid detection of Mycoplasma synoviae and avian reovirus in clinical samples of poultry using multiplex PCR. Avian Dis. 2013, 57, 220-224.
• Saito R., Misawa Y., Moriya K., Koike K., Ubukata K., Okamura N.: Development and evaluation of a loop-mediated isothermal amplification assay for rapid detection of Mycoplasma pneumoniae. J. Med. Microbiol. 2005, 54, 1037-1041.
• Tomczyk G.: Aktualny status epidemiologiczny mykoplazmozy w stadach drobiu w Polsce oraz ocena metod diagnostycznych. Praca hab. ZCHD, PIWet-PIB, Puławy 2013.
• Vasconcelos A. T., Ferreira H. B., Bizarro C. V., Bonatto S. L., Carvalho M. O., Pinto P. M., Almeida D. F., Almeida L. G., Almeida R., Alves-Filho L., Assunção E. N., Azevedo V. A., Bogo M. R., Brigido M. M., Brocchi M., Burity H. A., Camargo A. A., Camargo S. S., Carepo M. S., Carraro D. M., deMattos Cascardo J. C., Castro L. A., Cavalcanti G., Chemale G., Collevatti R. G., Cunha C. W., Dallagiovanna B., Dambro’s B. P., Dellagostin O. A., Falcão C., Fantinatti-Garboggini F., Felipe M. S., Fiorentin L., Franco G. R., Freitas N. S., Frías D., Grangeiro T. B., Grisard E. C., Guimarães C. T., Hungria M., Jardim S. N., Krieger M. A., Laurino J. P., Lima L. F., Lopes M. I., Loreto E. L., Madeira H. M., Manfio G. P., Maranhão A. Q., Martinkovics C. T., Medeiros S. R., Moreira M. A., Neiva M., Ramalho-Neto C. E., Nicolás M. F., Oliveira S. C., Paixão F., Pedrosa F. O., Pena S. D., Pereira M., Pereira-Ferrari L., Piffer I., Pinto L. S. D. P., Potrich R., Salim A. C., Santos F. R., Schmitt R., Schneider M. P., Schrank A., Schrank I. S., Schuck A. F., Seuanez H. N., Silva D. W., Silva R., Silva S. C., Soares C. M., Souza K. R., Souza R. C., Staats C. C., Steffens M. B., Teixeira S. M., Urmenyi T. P., Vainstein M. H., Zuccherato L. W., Simpson A. J., Zaha A.: Swine and poultry pathogens: the complete genome sequence of two strains of Mycoplasma hyopneumoniae and a strain of Mycoplasma synoviae. J. Bacteriol. 2005, 187, 5568-5577.
• Wetzel A. N., Lefevre K. M., Raviv Z.: Revised Mycoplasma synoviae vlhA PCRs. Avian Dis. 2010, 54, 1292-1297.
• Woźniakowski G., Kozdruń W., Samorek-Salamonowicz E.: Loop-mediated isothermal amplification for the detection of goose circovirus. Virol. J. 2012, 9, 110.
• Woźniakowski G., Samorek-Salamonowicz E., Kozdruń W.: Rapid detection of Marek’s disease virus in feather follicles by loop-mediated amplification. Avian Dis. 2011, 55, 462-467.
• Yang J. L., Rui Y., Cheng A. C., Wang M. S., Fu L. Z., Yang S. Q., Zhang S. H., Yang L., Xu Z. Y.: A simple and rapid method for detection of goose parvovirus in the field by loop mediated isothermal amplification. Virol. J. 2010, 7, 14.
• Zhao S., Yamamoto R.: Detection of Mycoplasma synoviae by polymerase chain reaction. Avian Pathol. 1993, 22, 533-542.
• Zhixun X., Sisi L., Liji X., Jiabo L., Yaoshan P., Xianwen D., Zhiqin X., Qing F., Mazhar I. Khan.: Simultaneous Typing of nine avian respiratory pathogens using a novel GeXP analyzer-based multiplex PCR Assay. J. Virol. Met. 2014, 207, 188-195.