PL EN


Preferencje help
Widoczny [Schowaj] Abstrakt
Liczba wyników
2014 | 17 | 2 |

Tytuł artykułu

Genetic differentiation between west and east european karyotypic groups of Sorex araneus (Soricomorpha) in Poland

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN

Wydawca

-

Rocznik

Tom

17

Numer

2

Opis fizyczny

http://www.ejpau.media.pl/volume17/issue2/art-09.html

Twórcy

autor
  • Department of Genetics, Wroclaw University of Environmental and Life Sciences, Kozuchowska 7, 51-631 Wroclaw, Poland
  • Department of Genetics, Wroclaw University of Environmental and Life Sciences, Kozuchowska 7, 51-631 Wroclaw, Poland
autor
  • Department of Genetics, Wroclaw University of Environmental and Life Sciences, Kozuchowska 7, 51-631 Wroclaw, Poland
autor
  • Department of Genetics, Wroclaw University of Environmental and Life Sciences, Kozuchowska 7, 51-631 Wroclaw, Poland
autor
  • Institute of Molecular Techniques, Medical University, Wroclaw, M. Curie-Sklodowskiej 52, 50-369 Wroclaw, Poland

Bibliografia

  • 1. Alarcón O., D’Elia G., Lessa E.P., Pardiñas U.F.J., 2011. Phylogeographic structure of the Fossorial Long-Clawed Mouse Chelemys macronyx (Cricetidae: Sigmodontidae). Zool. Stud., 50, 682–688.
  • 2. Andersson A-C., 2004. Postglacial population history of the common shrew (Sorex araneus) in Fennoscandia. Acta Universitatis Upsaliensis, Uppsala, 2004.
  • 3. Andersson A-C., Alström-Rapaport C., Fredga K., 2005. Lack of mitochondrial DNA divergence between chromosome races of the common shrew, Sorex araneus, in Sweden. Implications for interpreting chromosomal evolution and colonization history. Mol. Ecol., 14, 2703–2716.
  • 4. Balloux F., Lugon-Moulin N., Hausser J., 2000. Estimating gene flow across hybrid zones: how reliable are microsatellites? In: J.B. Searle, J.M. Wójcik, eds. Evolution in the Sorex araneus group: Cytogenetic and molecular aspects. Acta Theriol., 45 (Supplement 1), 93–101.
  • 5. Balloux F., Ecoffey E., Fumagalli L., Goudet J., Wyttenbach A., Hausser J., 1998. Microsatellite conservation, polymorphism, and GC content in shrews of the genus Sorex (Insectivora, Mammalia). Mol. Biol. Evol., 15, 473–475.
  • 6. Bilton  D.T., Mirol P.M., Mascheretti S., Fredga K., Zima J., Searle J.B., 1998. Mediterranean Europe as an area of endemism for small mammals rather than a source for northwards postglacial colonization. Proc. Roy. Soc. Lond. Ser. B., 265, 1219–1226.
  • 7. Brünner H., Turni H., Kapischke H-J., Stubbe M., Vogel P., 2002. New Sorex araneus karyotypes from Germany and the postglacial recolonization of central Europe. Acta Theriol., 47, 277–293.
  • 8. Earl Dent A., vonHoldt Bridgett M., 2011. STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method. Conserv. Genet. Res.,DOI: 10.1007/s12686-011-9548-7, Version: v 0.6.8.
  • 9. Evanno G.,  Regnaut S., Goudet J., 2005. Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Mol. Ecol., 14, 2611–2620.
  • 10. Excoffier L., 2000. Analysis of population subdivision. In: Balding D., Bishop M., Cannings C. (Eds.). Handbook of statistical genetics. New York, NY: Wiley and Sons.
  • 11. Excoffier L., Laval G., Schneider S., 2005. Arlequin ver. 3.0: An integrated software package for population genetics data analysis.  Evol. Bioinfo., Online 1, 47–50.
  • 12. Excoffier L., Smouse P., Quattro J., 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: Application to human mitochondrial restriction date. Genetics, 131, 479–491.
  • 13. Falush D., Stephens M., Pritchard J.K., 2003. Inference of population structure using multilocus genotype data: linked loci and correlated allele frequencies. Genetics, 164, 1567–1587.
  • 14. Falush D., Stephens M., Pritchard J.K., 2007. Inference of population structure using multilocus genotype data: dominant markers and null alleles. Mol. Ecol. Notes, 7, 574–578.
  • 15. Fedyk S., Banaszek A., Chętnicki W., Cichomska A., Szałaj K.A., 2000. Reassessment of the range of the Drnholec race: studies on meiosis in Sorex araneus hybrids. Acta Theriol., 45, 59–67.
  • 16. Fredga K., 1996. The chromosome races of Sorex araneus in Scandinavia. Hereditas, 125, 123–135.
  • 17. Fredga K., Narain Y., 2000. The complex hybrid zone between Abisko and Sidensjö chromosome races of Sorex araneus in Sweden. Biol. J. Linn. Soc., 70, 285–307.
  • 18. Freeland J.R., 2008. Molecular Ecology. Wydawnictwo Naukowe PWN SA. Warszawa, Poland (in Polish).
  • 19. Good J.M., Hird S., Reid N., Demboski J.R., Steppan S.J., Martin-Nims T.R., Sullivan J., 2008. Ancient hybridization and mitochondrial capture between two species of chipmunks. Mol. Ecol., 17, 1313–1327.
  • 20. Halkka L., Kaikusalo A., Vakula N., 1994. Revision of Sorexaraneus L. chromosome nomenclature, and race N new to Finland. Ann. Zool. Fenn., 31, 283–288.
  • 21. Hewitt G.M., 1999. Post-glacial re-colonization of European biota. Biol. J. Linn. Soc., 68, 87–112.
  • 22. Horn A., Basset P., Yannic G., Banaszek A., Borodin P.M., Bulatova N.S., Jadwiszczak K., Jones R.M., Polyakov A.V., Ratkiewicz M., Searle J.B., Shchipanov N.A., Zima J., Hausser J., 2012. Chromosomal rearrangements do not seem to affect the gene flow in hybrid zones between karyotypic races of the common shrew (Sorex araneus). Evolution, 66, 882–889.
  • 23. Jadwiszczak K.A., 2002. Chromosome structure of the hybrid zone between the Drnholec and Białowieża races of the common shrew, Sorex araneus Linnaeus, 1758. DPhil Thesis, Białystok University (in Polish).
  • 24. Jadwiszczak K.A., Ratkiewicz M., Banaszek A., 2006. Analysis of molecular differentiation in a hybrid zone between chromosomally distinct races of the common shrew Sorex araneus (Insectivora: Soricidae) suggests their common ancestry.  Biol. J. Linn. Soc., 89, 79–90.
  • 25. Jakobsson M., Rosenberg N.A., 2007. CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure. Bioinformatics, 23, 1801–1806.
  • 26. Jankovská V., Chromy P., Nižnianská M., 2002. Šafárka-first paleobotanical data of the character of Last Glacial vegetation and landscape in the West Carpathians (Slovakia). Acta Paleobot., 42, 39–50.
  • 27. Kalinowski S.T., Taper M.L., 2006. Maximum likelihood estimation of the frequency of null alleles at microsatellite loci. Conserv. Genet., 7, 991–995.
  • 28. Kimura M., T. Otha, 1978. Stepwise mutation model and distribution of allelic frequencies in a finite populations. Proc. Nat. Acad. Sci. USA, 75, 2868–2872.
  • 29. Kotlik P., Deffontaine V., Mascheretti S., Zima J., Michaux J.R., Searle J.B., 2006. A northern glacial refugium for bank vole (Clethrionomys glareolus). Proc. Natl. Acad. Sci. USA, 103, 14860–14864.
  • 30. Lundqvist A-C., Alström-Rapaport C., Tegelström H., 2011. Fennoscandian phylogeography of the common shrew Sorex araneus. Postglacial recolonisation – combining information from chromosomal varaition with mitochondrial DNA data. Acta Theriol., 56, 103–116.
  • 31. Mix A.C., Bard E., Schneider R., 2001. Environmental processes of the ice age: land, oceans, glaciers (EPILOG). Quat. Sci. Rev., 20, 627–657.
  • 32. Pavesi L., De Matthaeis E., Tiedemann R., Ketmaier V., 2011. Temporal population Genetics and COI Phylogeography of the Sandhopper Macarorchestia remyi (Amphipoda: Talitridae). Zool. Stud., 50, 220–229.
  • 33. Pritchard J.K., Stephens M., Donnelly P., 2000. Inference of population structure using multilocus genotype data. Genetics, 155, 945–959.
  • 34. Polyakov A.V., Zima J., Searle J.B., Borodin P.M., Ladygina T., 2000. Chromosome races of the common shrew Sorex araneus in the Ural Mts: a link between Siberia and Scandinavia? Acta Theriol., 45, 19–26.
  • 35. Polyakov A.V., Panov V.V, Ladygina T., Bochkarev M.N., Rodionova M.I., Borodin P.M., 2001. Chromosomal evolution of the common shrew Sorex araneus L. from the Southern Urals and Siberia in the postglacial period. Russ. J. Genet., 37, 351–357.
  • 36. Ratkiewicz M., 2006. Historical events, genetic and environmental barriers – their impact on gene flow and population structure in animals. Kosmos, 2–3, 165–176 (in Polish).
  • 37. Ratkiewicz M., Fedyk S., Banaszek A., Gielly L., Chętnicki W., Jadwiszczak K., Taberlet P., 2002. The evolutionary history of the two karyotypic groups of the common shrew, Sorex araneus, in Poland. Heredity, 88, 235–242.
  • 38. Rosenberg N.A., 2004. Distruct: a program for the graphical display of population structure. Mol. Ecol. Notes, 4, 137–138.
  • 39. Ruedi M., Walter S., Fischer M.C., Scaravelli D., Excoffier L., Heckel G., 2008. Italy as a major Ice Age refuge area for the bat Myotis myotis (Chiroptera: Vespertilionidae) in Europe. Mol. Ecol., 17, 1801–1814.
  • 40. Searle J.B., 1984. Three new karyotypic races of the common shrew Sorex araneus (Mammalia: Insectivora) and a phylogeny. Syst. Zool., 33, 184–194.
  • 41. Searle J.B., Wójcik J.M., 1998. Chromosomal evolution: the case of Sorex araneus.  In: Wójcik J.M., Wolsan M. (Eds.). Evolution of Shrews. Mammal Research Institute, Polish Academy of Sciences, Białowieża, 219–268.
  • 42. Sommer R.S., Nadachowski A., 2006. Glacial refugia of mammals In Europe: evidence from fossil records. Mammal. Rev., 36, 251–265.
  • 43. Stewart J.R., Lister A.M., 2001. Cryptic northern refugia and the origins of the modern biota. Trends Ecol. Evol., 16, 608–613.
  • 44. Weir B.C., Cockerham C.C. 1984. Estimating F-statistics for the analysis of population structure. Evolution, 38, 1358–1370.
  • 45. Willis K.J., van Andel T.H., 2004. Trees or no trees? The environments of central and eastern Europe during the last glaciations. Quat. Sci. Rev., 23, 2369–2387.
  • 46. Wójcik J.M., 1993. Chromosome races of the common shrew Sorex araneus in Poland: a model of karyotype evolution. Acta Theriol., 38, 315–338.
  • 47. Wójcik J.M., Ratkiewicz M., Searle J.B., 2002. Evolution of the common shrew, Sorex araneus: chromosomal and molecular aspects. Acta Theriol., 47, 139–167.
  • 48. Wójcik J.M., Borodin P.M., Fedyk S., Fredga K., Hausser J., Mishta A., Orlov V.N., Searle J.B., Volobouev V., Zima J., 2003. The list of chromosome races of the common shrew Sorex araneus (updated 2002). Mammalia, 67, 169–178.
  • 49. Wójcik J.M., Kawałko A., Markova S., Searle J.B., Kotlik P., 2010. Phylogeographic signatures of northward post-glacial colonization from high-latitude refugia: a case of bank voles using museum specimens. J. Zool., 281, 249–262.
  • 50. Wright  S., 1951. The genetical structure of populations. Ann. Eugen., 15, 323–354.
  • 51. Wyttenbach A., Favre L., Hausser J., 1997. Characterisation of simple sequence repeats in the genome of the common shrew. Mol. Ecol., 6, 797–800.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

bwmeta1.element.agro-ce3910a1-c99d-4235-8dde-a0b316ecc64f
JavaScript jest wyłączony w Twojej przeglądarce internetowej. Włącz go, a następnie odśwież stronę, aby móc w pełni z niej korzystać.