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1997 | 44 | 1 |

Tytuł artykułu

Studies on the translation mechanism of subgenomic RNA of potato leafroll virus

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
The expression of open reading frames located on the subgenomic RNA (sgRNA) has been studied in an in vitro transcription and translation system. The obtained results indicate: a) translation of sgRNA occurs according to the scanning model since the insertion of a palindrome (AGo = -61 kcal/mol) pre­vents the initiation of translation; b) ORF6 is translated by suppression of the stop codon separating ORF4 from ORF6 and the presence of suppressor tRNA is necessary for the read through; c) the presence of leader sequence of sgRNA (212 nucleotides) decreases the translation efficiency of ORFs located down­stream and it afTects the ratio of products of ORF4 and ORF5; d) 3UTR does not influence on an expression of genes located on the sgRNA.

Wydawca

-

Rocznik

Tom

44

Numer

1

Opis fizyczny

p.69-77,fig.

Twórcy

autor
  • Polish Academy of Sciences, A.Pawinskiego 5a, 02-106 Warsaw, Poland

Bibliografia

  • 1. Miller, W.A., Dinesh-Kumar, S.P. & Paul, C.P. (1995) Luteovirus gene expression. Crit. Rev. Plant Sci. 14, 179-211.
  • 2. Mayo, M.A. & Ziegler-Graff, V. (1996) Molecu­lar Biology of luteoviruses. Ack>. Virus Res. 46, 416-460.
  • 3. Bahner, I., Lamb, J., Mayo, M.A. & Hay, R.T. (1990) Expression of the genome of potato leafroll virus: Readthrough of the coat protein termination codon in vivo. J. Gen. Virol. 71, 2251-2256.
  • 4. Tacke, E., Prufer, D., Salamini, F. & Rohde, W. (1990) Characterization of a potato leafroll luteovirus subgenomic RNA: Differential ex­pression by internal translation initiation and UAG suppression. J. Gen. Virol. 71, 2265 2272.
  • 5. Sambrook, J., Fritsch, E.F. & Maniatis, T. (1989) Molecular Cloning: A Laboratory Man ual; 2nd edn., Cold Spring Harbor Labora­tory, Cold Spring Harbor, NY.
  • 6. Palucha, A, Sadowy, E., Kujawa, A., Jusz­czuk, M., Zagorski, W. & Hulanicka, D. (1994) Nucleotide sequence of RNA of a Polish isolate of potato leafroll luteovirus. Acta Biochim. Polon. 41, 405-414.
  • 7. Sadowy, E., Palucha, A.H., Gronenbom, B., Zag6rski, W. & Hulanicka. D.M. (1994) Con­structing infectious transcripts of potato leaf- roll virus. Plants and viruses: Partners in pathogenicity. International Conference: 17-21 July, Grignon, France, Abstract.
  • 8. Kujawa, A.B., Drugeon, G., Hulanicka, M.D. & Haenni, A.-L. (1993) Structural require­ments for efficient translational frameshift- ing in the synthesis of the putative viral RNA- dependent RNA polymerase of potato leafroll virus. Nucleic Acids Res. 21, 2165-2171.
  • 9. Kozak, M. (1989) The scanning model for translation: An update. J. Cell Biol. 108. 229-241.
  • 10. Herman, R.C. (1989) Alternatives for the in­itiation of translation. Trends Biochem. Sci. 14, 219-222.
  • 11. Macejak, D.G. & Sarnow, P. (1991) Internal initiation of translation mediated by the 5' leader of cellular mRNA Nature 353, 90-94.
  • 12. Reutenaur, A., Ziegler-Graff, V., Lot, H., Scheidecker, D., Guilley, H., Richards, K. & Jonard, G. (1993) Identification of beet west­ern yellows luteovirus genes implicated in viral replication and particle morphogenesis. Virology 195, 692-699.
  • 13. Dinesh-Kumar, S.P., Brault, V. & Miller, W.A. (1992) Precise mapping and in vitro translation of a Afunctional subgenomic RNA of barley yellow dwarf virus. Virology 187, 711-722.
  • 14. Davies, LW. & Wilson, T.M.A. (1992) Genetic Engineering with Plant Viruses. CRC Press, Inc. Boca Raton, F1
  • 15. Rochon, D.M. & Johnston, J.C. (1991) Infec­tious transcripts from cloned cucumber ne­crosis virus cDNA: Evidence for a Afunctional subgenomic mRNA. Virology 181, 656-665.
  • 16. Veidt, I., Lot, H.. Leiser, M., Scheidecker, D., Guilley, H., Richards, K. & Jonard, G. (1988) Nucleotide sequence of beet western yellows virus RNA. Nucleic Acids Res. 16,9917-9932.
  • 17. Miller, J.S. & Mayo, M.A. (1991) The location of the 5' end of the potato leafroll luteovirus subgenomic coat protein mRNA. J. Gen. Virol. 72, 2633-2638.
  • 18. Skuzeski, J.M., Lindy, M.N., Gesteland, R.F. & Atkins, J.F. (1991) The signal for leaky UAG stop codon in several plant viruses in­cludes the two downstream codons. J. Mol. Biol. 218, 365-373.
  • 19. Brown, C M., Dinesh-Kumar, S.P. & Miller, W.A. (1996) Local and distant sequences are required for efficient readthrough of the bar­ley yellow dwarf virus PAVcoat protein gene stop codon. J. Virol. 70, 5884-5892.
  • 20. Gallie, D.R., Sleat, D.E., Watts, J.W., Turner, P.C. & Wilson, T.M.A. (1987) The 5' leader sequence of tobacco mosaic virus RNA en­hances the expression of foregin gene tran­scripts in vitro and in vivo. Nucleic Acids Res. 15, 3257-3273.
  • 21. Jobling, S.A. & Gehrke, L. (1987) Enhanced translation of chimeric messenger RNAs con­taining a plant viral untranslated leader se­quence. Nature 325, 622-625.
  • 22. Gallie, D R., Sleat, D.E., Watts, J.W., Turner, P.C. & Wilson, T.M.A. (1987) A comparison of eukaryotic viral 5' leader sequences as en­hancers of mRNA expression in vivo. Nucleic Acids Res. 15,8693-8711.
  • 23. Zelenina, D.A., Kulaeva, O.L., Smirnyagina, E.V., Solovyev, A.G., Miroshnichenko, N.A., Fedorkin, O.N., Rodionova, N.P., Morozov, S.Yu. & Atabekov, J.G. (1992) Translation enhancing properties of the 5'-leader of potato virus X genomic RNA. FEBS Lett. 296. 267-270.
  • 24. Jobling, S.A., Cuthbert, C M., Rogers, S.G., Fraley, R.T., Gehrke, L. (1988) In vitro tran­scription and translation efficiency of chi­meric SP6 messenger RNAs devoid of 5' vec­tor nucleotides. Nucleic Acids Res. 16. 4483-4498.
  • 25. Zuker, M. & Stiegler, P. (1981) Optimal com­puter folding of large RNA sequences using thermodynamics and auxiliary information. Nucleic Acids Res. 9, 2197-2206.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

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