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1998 | 45 | 4 |

Tytuł artykułu

Acid promoted transformations of fluorescent luminarosine and its 2'-modified analogues

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
The susceptibility of highly fluorescent luminarine nucleosides to acid promoted anomerization reactions has been studied in order to select a derivative with suitable properties for chemical synthesis of luminarine-labeled oligo(deoxy)ribonucleotides. Both O-acetylated derivatives Ia-c and parent luminarosine IIa, as well as 2'-O-meth-ylluminarosine IIb, and 2'-deoxyluminarosine IIc undergo anomerization at pH = 4 however, at considerably different velocities. In the case of O-protected nucleosides (Ia-c), the anomerization leads to an equilibrium mixture of respective b and a furanosides, the rate and extent of anomerization decreasing in the following order: Ic >> Ia > Ib. Parent nucleosides (IIa-c) bearing free hydroxyls are generally more susceptible to anomerization than the O-acetylated derivatives but a similar order of reactivity (IIc >> IIa > IIb) is observed. In each case, a complex mixture containing both b and a ribopyranosyl and -furanosyl forms is formed. Their structure and anomeric configuration have been proved by 1H and 13C NMR spectroscopy. The results point to 2'-O-methylluminarosine as the fluorophore of choice for further derivatization and chemical introduction into oligo(deoxy)ribonucleotides.

Wydawca

-

Rocznik

Tom

45

Numer

4

Opis fizyczny

p.941-948,fig.

Twórcy

autor
  • Adam Mickiewicz University, Grunwaldzka 6, 60-780 Poznan, Poland
autor
autor
autor
autor

Bibliografia

  • 1. Skalski, B., Bartoszewicz, J., Paszyc, S., Gdaniec, Z. & Adamiak, R.W. (1987) Fluores­cent nucleoside with a new heterocyclic be- taine as the aglycone photochemical prepara­tion and properties. Tetrahedron 43, 3955- 3961.
  • 2. Adamiak, R.W., Biala, E. & Skalski, B. (1985) New, ionic side-products in oligonucleotide synthesis: Formation and reactivity of fluores­cent N-{purin-6-yl)pyridinium salts. Nucleic Acids Res. 13, 2989-2996.
  • 3. Adamiak, D.A., Surma, K., Gawron, M. & Skalski, B. (1991) X-ray crystal structure of lu­minarine — aglycone of highly fluorescent lu- minarosine. Nucleosides Nucleotides 10, 603- 605.
  • 4. Skalski, B., Paszyc, S., Adamiak, R.W., Steer, R.P. & Verrall, R.E. (1989) Photophysical studies of luminarosine - a new, highly fluo­rescent nucleoside with pteridine-like betaine as the aglycone. J. Chem. Soc. Perkin Trans. II 1691-1696.
  • 5. Mielewczyk, S., Dominiak, G., Gdaniec, Z., Krzymariska-Olejnik, E., Adamiak, R.W. & Skalski, B. (1991) Deoxyluminarosine: New, photochemically prepared fluorophore for the sequence-specific oligonucleotide labelling. Nucleosides Nucleotides 10, 263-267.
  • 6. Burdzy, A., Skalski, B., Paszyc, S., Gdaniec, Z. & Adamiak, R.W. (1998) Photosensitized preparation of fluorescent luminarosine and analogues. Nucleosides Nucleotides. 17, 143- 151.
  • 7. Robyt, J.F. (1998) Essentials of Carbohydrate Chemistry, pp. 48-50, Springer, New York.
  • 8. Breitmaier, E. & Voelter, W. (1990) Carbon-13 NMR spectroscopy: High resolution methods and applications in organic chemistry; pp. 379-414, VCH Verlagsgesellschaft, Wein- heim, New York.
  • 9. Minch, M.J. (1994) Orientational dependence of vicinal proton-proton NMR coupling con­stants: The Karplus relationship. Cone. Magn. Reson. 6, 41-56.
  • 10. Smiataczowa, K., Jasinski, T. & Sokolowski, J. (1979) The effect of substituents in an aro­matic aglycon on course of mutarotation of N- D-glucosides. Part III. Thermodynamics of ac­tivation. Pol J. Chem. 53, 1235-1242.
  • 11. March, J. (1992) Advanced Organic Chemistry: Reactions, Mechanisms and Structure; pp. 17- 19, John Wiley & Sons, New York.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

bwmeta1.element.agro-article-e595e30b-3d56-42eb-8423-331682a3cc6d
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