Zastosowanie technik biologii molekularnej w parazytologii: za i przeciw

• Autorzy: Majewska A C , Sulima P.
• Języki publikacji: PL

Abstrakty

EN

This review deals with possible advantages and disadvantages connected with applying molecular biology techniques in parasitology. It particularly concerns molecular diagnosis and epidemiology, as well as phylogenesis and taxonomy of selected parasite species.

Słowa kluczowe

PL

parazytologia; techniki badawcze; techniki biologii molekularnej; diagnostyka

• Wydawca: -
• Czasopismo: Wiadomości Parazytologiczne
• Rocznik: 1998
• Tom: 44
• Numer: 2
• Opis fizyczny: s.181-194, bibliogr.

Twórcy

autor

Majewska A C

• Akademia Medyczna, ul.Fredry 10, 61-701 Poznan

autor

Sulima P.

Bibliografia

• ACUNA-SOTO R., SAMUELSON J., DE GIROLAMI P., ZARATE L., MILLAN-VELASCO F., SCHOOL-NICK G., WIRTH D. 1993. Application of the polymerase chain reaction to the epidemiology of pathogenic and nonpathogenic Entamoeba histolytica. Am. J. Trop. Med. Hyg. 48: 58-70.
• AOUIZERATE F., CAZENAVE J., POIRIER L., VERIN P., CHEYROU A., BEGUERET J., LAGOUTTE F. 1993. Detection of Toxoplasma gondii in aqueous humor by the polymerase chain reaction. Br. J. Ophtalmol. 77: 107-109.
• ASMUTH D. M., DE GIROLAMI P. C., FEDERMAN M., EZRATIY C. R., PIESKOV D. K., DESAI G.,WANKE C. A. 1994. Clinical features of microsporidiosis in patients with AIDS. Clin. Infect.Dis. 18: 819-825.
• BARKER D. C. 1989. Molecular approaches to DNA diagnosis. Parasitology 99 (suppl.): 125-146.
• BARKER R. H. Jr. 1994. Use of PCR in the Field. Parasitol. Today. 10: 117-119.
• BAVERSTOCK P. R., FIELKE R., JOHNSON A. M., BRAY R. A., BEVERIDGE I. 1991. Conflicting phylogenetic hypotheses for the parasitic platyhelminthes tested by partial sequencing of 18S ribosomal RNA. Int. J. Parasitol. 21: 329-339.
• BUSH A. O., CAIRA J. N., MINCHELLA D. J., NADLER S. A., SEED J. R. 1995. Parasitology year 2000. J. Parasitol. 81: 835-842.
• CIMINO G. D., METCHETIE K. C., TESSMAN J. W., HEARST J. E., ISAACS S. T. 1991. Post-PCR sterylization: a method to control carry over contamination for the polymerase chain reaction. Nucleic Acid Res. 19: 99-107.
• CINGOLANI A. DE LUCA A., AMMASSARI A., MURRI R., LINZALONE A., GRILLO R., ANTINORI A. 1996. PCR detection of Toxoplasma gondii DNA in CSF for the differential diagnosis of AIDS-related focal brain lesions. J. Med. Microbiol. 45: 472-476.
• CRISTINA N., PELLOUX H., GOULHOT C., BRTON J. P., LECLERCQ P., AMBROISE-THOMAS P. 1993. Detection of Toxoplasma gondii in AIDS patients by the polymerase chain reaction. Infection. 3: 150-153.
• DA SILVA A. J., BORNAY-LLINARES F. J., DEL AGUILA DE LA PUENTE C., MOURA H., MAURO PERALATA J., SOBOTTKA I., SCHWARTZ D. A., VISVESVARA G. S., SLEMENDA S. B., PIENIAZEK N. J. 1997a. Diagnosis of Enterocytozoon bieneusi (Microsporidia) infections by Polymerase Chain Reaction in stool samples using primers based on the region coding for small-subunit ribosomal RNA. Arch. Pathol. Lab. Med. 121: 874-879.
• - SLEMENDA S. B., VISVESVARA G. S., SCHWARTZ D. A., WILCOX C. M., WALLACE S., PIENIAZEK N. J. 1997b. Detection of Septata intestinalis (Microsporidia) Cali et al. 1993 using Polymerase Chain Reaction Primers targeting the small subunit ribosomal RNA coding region. Mol. Diagnosis 2: 47-52.
• DISSANAYAKE S., MIN X., PIESSENS W. F. 1991. Detection of amplified Wuchereria bancrofti DNA in mosquitoes with nonradioactive probe. Mol. Biochem. Parasitol. 45: 49-56.
• DUPON M., CAZENAVE J., PELLEGRIN J. L., RAGNAUD J. M., CHEYROU A., FISCHER I., LENG B., LACUT J. Y. 1995. Detection of Toxoplasma gondii by PCR and tissue culture in cerebrospinal fluid and blood of human immunodeficiency virus-seropositive patients. J. Clin. Microbiol. 33: 2421-2426.
• ERITMAN K. D., MEREDITH S. E. O., GREENE B. M., UNNASCH T. R. 1990. Isolation and characterisation of form specific DNA sequences of O. volvulus. Acta Leidensia 59: 253-260.
• - UNNASCH T. R., GREENE B. M., ALBIEZ E. J., BOATENG J., DENKE A. M., FERRARONI J. J., KARAM M., SCHULTZ-KEY H., WILLIAMS P. N. 1987. A DNA sequence specific for forest form Onchocerca volvulus. Nature 327: 415-417.
• FUENTES I., RODRIGUES M., DOMINGO C. J., DEL CASTILLO F., JUNCOSA T., ALVAR J. 1996. Urine sample used for congenital Toxoplasmosis diagnosis by PCR. J. Clin. Microbiol. 34: 2368-2371.
• GATTI S., CEVINI C., BRUNO A., RAMSAN M., MARCHI L., SCAGLIA M. 1997. First isolation and characterization in humans of Entamoeba histolytica (laboratory-made) zymodeme XX. Parasitol. Res. 83: 716-718.
• GIBSON W., BAILEY M. 1994. Genetic exchange in Trypanosoma brucei: evidence for meiosis from analysis of a cross between drug-resistant transformants. Mol. Biochem. Parasitol. 64: 241-252.
• GUO Z. G., GROSS U., JOHNSON A. M. 1997. Toxoplasma gondii virulence marker identified by random amplified polymorphic DNA polymerase chain reaction. Parasitol. Res. 83: 458-463.
• HOWE D. K., SIBLEY L. D. 1995. Toxoplasma gondii comprises three clonal lineages: correlation of parasite genotype with human disease. J. Infect. Dis. 172: 1561-1566.
• JINNO Y, YOSHIURA K., NIIKAWA N. 1990. Use of psoralen as extinguisher of contaminated DNA in PCR. Nucleic Acid Res. 18: 6739.
• JOHNSON S. M. S., ILLANA S., HAKENDORF P., BAVERSTOCK P. R. 1988. The phylogenetic relationships of the apicomplexan protist Sarcocystis as determined by small subunit ribosomal RNA comparison. J. Parasitol. 74: 847-860.
• JOSS A. W. L., HOO-YEN D. O. 1997. The effects of sample storage on polymerase chain reaction-based of Toxoplasma gondii in amniotic fluids. J. Med. Microbiol. 46: 92-96.
• KARASCH M. C. 1987. Slave Life in Rio de Janeiro: 1808-1850. Princenton Univ. Press.
• KASPRZAK W., MAJEWSKA A. C. 1995. Przydatność metod analizy genomu w diagnostyce giardiozy i kryptosporydiozy. Wiad. Parazytol. 41: 3-11.
• KOCK N. P., PETERSEN H., FENNER T ., SOBOITKA I., SCHMETZ C., DEPLAZES P ., PIENIAZEK N. J., ALBRECHT H., SCHOITELIUS J. 1997. Species-specific identification of Microsporidia in stool and intestinal biopsy specimens by the Polymerase Chain Reaction. Eur. J. Microbiol. Infect. Dis. 16: 369-376.
• LAVRARD I., CHOUAID C., ROUX P., POIROT L., MARTEAU M., LEMARCHAND B., MEYOHAS M. C., OLIVIER J. L. 1995. Pulmonary toxoplasmosis in HIV-infected patients: usefulness of polymerase chain reaction and cell culture. Eur. Respir. J. 8: 697-700.
• LONGO M . C., BERNINGER M. S., HARTLEY J. L. 1990. Use of uracil DNA glycosylase (UNG) for the control in polymerase chain reactions. Gene 93: 125-128.
• MAJEWSKA A. C., KASPRZAK W., WERNER A., SULIMA P. 1997. Detecting Cryptosporidium oocysts, coproantigen and DNA in human and animal faeces. Abstracts of Xth Wrocław Parasitological Conference, Karpacz, June 11-14, 1997: 29.
• MASIGA D. K., SMYTH A. J., HAYES P., BROMIDGE T. J., GIBSON W. C. 1992. Sensitive detection of trypanosomes in tsetse flies by DNA amplification. Int. J. Parasitol. 22: 909-918.
• MEREDITH S. E. O., LANDO G., GBAKIMA A. A., ZIMMERMAN P. A., UNNASCH T. R. 1991. Onchocerca volvulus: application of the polymerase chain reaction to identification and strain differentiation of the parasite. Exp. Parasitol. 73: 335-344.
• MOLINA J. M., OKSENHENDLER E., BEAUVAIS B., SARFATI C., JACCARD A., DEROUIN F., MODAI J. 1995. Disseminated microsporidiosis due to Septata intestinalis in patient with AIDS. Clinical features and response to Albendazole therapy. J. Infect. Dis. 171: 245-249.
• MÜLLER N., ZIMMERMANN V., HENTRICH B., GOITSTEIN B. 1996. Diagnosis of Neospora caninum and Toxoplasma gondii infection by PCR and DNA hybridization immunoassay. J. Clin. Microbiol. 34: 2850-2852.
• NADLER S. A. 1992. Phylogeny of some ascaridoid nematodes, inferred from comparison of 18S and 28SrRNA sequences. Mol. Biol. Evol. 9: 932-944.
• OMBROUCK C., CICERON L., BILIGUI S., BROWN S., MARECHAL P., VAN GOOL T., DATRY A., DANIS M., DSPORTES-LIVAGE I. 1997. Specific PCR assay for direct detection of intestinal Microsporidia Entercytozoon bieneusi and Encephalitozoon intestinalis in fecal specimens from human immunodeficiency virus-Infected patients. J. Clin. Microbiol. 35: 652-655.
• PANG J., MODLIN J., YOLKEN R. 1992. Use of modified nucleotides and uracil-DNA glycosylase (UNG) for the control of contamination in the PCR-based amplification RNA. Mol. Cell. Probes. 6: 251-256.
• PIENIĄŻEK N. J. 1998. Diagnostyka chorób infekcyjnych i inwazyjnych. W: J. Bal [red.] Badania molekularne i cytogenetyczne w medycynie. Elementy genetyki klinicznej. Springer, PWN, Warszawa: 222-231.
• POL S., ROMANA C. A., RICHARD S. R., CARNOT F., DUMMONT J. L., BOUCHE H., PIALOUX G., STERN M., PAYS J. F., BERTHELOT P. 1993. Microsporidia infection in patients with the human immunodeficiency virus and unexplained cholangitis. N. Engl. J. Med. 328: 95-99.
• RODRIGUEZ J. C., MARTINEZ M. M., MARTINEZ A. R., ROYO G. 1997. Evaluation of different techniques in the diagnosis of Toxoplasma encephalitis. J. Med. Microbiol. 46: 597-601.
• ROHDE K., HEFFORD C., ELLIS J. T., BAVERSTOCK P. R., JOHNSON A. M., WATSON N. A., DITTMANN S. 1993. Contributions to the phylogeny of Platyhelminthes based on partial sequencing of 18S ribosomal DNA. Int. J. Parasitol. 23: 705-724.
• SANUKI J., ASAI T., OKUZAWA E., KOBAYASHI S., TAKEUCHI T. 1997. Identification of Entamoeba histolytica and E. dispar cysts in stool by polymerase chain reaction. Parasitol. Res. 83: 96-98.
• SARGEAUNT P. G. 1985. Zymodeme expressing possible genetic exchange in Entamoeba histolytica. Trans. R. Soc. Trop. Med. Hyg. 79: 86-89.
• SARKAR G., SOMMER S. 1990a. Shedding light on PCR contamination. Nature 343: 27.
• - - 1990b. More light on PCR contamination. Ibid. 343: 340-341.
• SCHRIEFER M. E., SACCI J. B. JR., WIRTZ R. A., AZAD A. F. 1991. Detection of polymerase chain reaction - amplified malarial DNA in infected blood and individual mosquitoes. Exp. Parasitol. 73: 311-316.
• SOBOTTKA I., ALBRECHT H., SCHÄFER H., SCHOTIELIUS J., VISVESVARA G. S., LAFUS R., SCHWARTZ D. A. 1995. Disseminated Encephalitozoon (Septata) intestinalis infection in a patient with AIDS: novel diagnostic approaches and autopsy-confirmed parasitological cure following treatment with albendazole. J. Clin. Microbiol. 33: 2948-2952.
• SOGIN M. L., GUNDERSON J. H., ELWOOD H. J., ALONSO R. A., PEATTIE D. A. 1989. Phylogenetic meaning of the kingdom concept: an unusual ribosomal RNA from Giardia lamblia. Science 243: 75-77.
• THOMPSON R. C. A., LYMBERY A. J. 1996. Genetic variability in parasites and host-parasite interactions: Parasitology 112: S7-S22.
• TIBAYRENC M., KJELLBERG F., AYALA F. J. 1991. The clonal theory of parasitic protozoa. BioScience 41: 767-774.
• TROLL H., MARTI H., WEISS N. 1997. Simple differential detection of Entamoeba histolytica and Entamoeba dispar in fresh stool specimens by sodium acetate-acetic acid-formalin concentration and PCR. J. Clin. Microbiol. 35: 1701-1705.
• UNNASCH T. R., ZIMMERMAN P. A. 1995. Systematics: questions and approaches for the molecular parasitologist. In: Molecular approaches to parasitology, Wiley-Liss, Inc: 5-20.
• VANEECHOUTTE M., VAN ELDERE J. 1997. The possibilities and limitations of nucleic acid amplification technology in diagnostic microbiology. J. Med. Microbiol. 46: 188-194.
• VAN GOOL T., CANNING E. U., DANKERT J. 1994. An improved practical and sensitive technique for the detection of microsporidian spores in stool samples. Trans. R. Soc. Trop. Med. Hyg. 88: 189-190.
• VAN KEULEN H., GUTIEL R. R., GATES M. A., CAMPBELL S. R., ERLANDSEN S. L., JARROLL E. L., KULDA J., MEYER E. A. 1993. Unique phylogenetic position of Diplomonadida based on the complete small subunit ribosomal RNA sequence of Giardia ardeae, G. muris, G. duodenalis and Hexamita sp. FASEB J. 7: 223 -231.
• VELASQUEZ J. N., CARNEVALE S., GUARNERA E. A., LABBE J. H., CHERTCOFF A., CABRERA M. G., RODRIGUEZ M. 1996. Detection of the Microsporidian parasite Enterocytozoon bieneusi in specimens from patients with AIDS by PCR. J. Clin. Microbiol. 34: 3230-3232.
• VISVESVARA G. S., LEITCH G. J., DA SILVA A. J., CROPPO G. P., MOURA H., WALLACE S., SLEMENDA S. B., SCHWARTZ D. A., MOSS D., BRYAN R. T., PIENIAZEK N. J. 1994. Polyclonal and monoclonal antibody and PCR-amplified small-subunit rRNA identification of a microsporidian, Encephalitozoon hellem, isolated from an AIDS patient with disseminated infection. Ibid. 32: 2760-2768.
• - DA SILVA A. J., CROPPO G. P., PIENIAZEK N. J., LEITCH G. J., FERGUSON D., DE MOURA H., WALLACE S., SLEMENDA S. B., TYRRELL I., MOORE D. F., MEADOR J. 1995. In vitro culture and serologie and molecular identification of Septata intestinalis isolated from urine of a patient with AIDS. Ibid. 33: 930-936.
• WATERS A. P., HIGGINS D. G., MCCUTCHAN T. F. 1991. Plasmodium falciparum appears to have arisen as a result of lateral transfer between avian and human hosts. Proc. Natl Acad. Sci. USA 88: 3140-3144.
• WEBER R., BRYAN R. T., SCHWARTZ D. A., OWEN R. L. 1994. Human microsporidial infections. Clin. Microbiol. Rev. 7: 426-461.
• WILSON M., SCHANTZ P., PIENIAZEK N. 1995. Diagnosis of parasitic infections: immunologic and molecular methods. In: Manual of Clinical Microbiology. Eds. Murray P. A., Beran E. J., Pfaller M. A., Tenover F. C., Yolken R. Y., ASM Press, Washington DC., 6th ed.: 1159-1170.
• ZIMMERMAN P. A., DADZIE K. Y., DE SOLE G., REMME J., SOUMBEY ALLEY E., UNNASCH T. R. 1992. Onchocerca volvulus DNA probe classification correlates with epidemiological patterns of blindness. J. Infect. Dis. 165: 964-968.
• - TOE L., UNNASCH T. R. 1993. Design of Onchocerca DNA probes based upon analysis of a repeated sequence family. Mol. Biochem. Parasitol. 58: 259-269.