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1995 | 41 | 1 |

Tytuł artykułu

Przydatnosc metod analizy genomu w diagnostyce giardiozy i kryptosporydiozy

Treść / Zawartość

Warianty tytułu

Języki publikacji

PL

Abstrakty

EN
The article comprises a critical review on practical applications of molecular technology in parasitological diagnostics in a broad sense, also as a diagnosis of species and a method of epidemiological analysis. Techniques of genome analysis at different levels, as specific nucleic acid probes, DNA restriction profiles (RFLP), hybridization techniques, pulse-field gel electrophoresis, in vitro nucleic acid amplification, and DNA fingerprint technique used in studies on Giardia and Cryptosporidium were discussed. The essential reservation as far as this technology is concerned refers to its usefulness in parasitological diagnostics; there is no sense in working out methods for recognizing parasites which could otherwise be identified by well trained parasitologists and simple microscopic methods. The improved diagnosis of parasites resulting from the application of molecular technology significantly contributed to the armentarium of parasitologists. Application of recent molecular technology in diagnosis of giardiosis and cryptosporidiosis may basically support clinical diagnosis which provides possibilities of early and selective treatment and makes possible epidemiological studies. These assays will permit not only a rapid diagnosis and exact differentiation but will also enable a better recognition of Giardia and Cryptosporidium genome organization. However, in spite of the wide availability of this new techniques they have not been fully applied - as yet – in diagnosis and in epidemiological studies on these parasites. The authors share the opinion of BUSCH (1991) on the need of proper recognition of high-quality and rigorous work in employing new molecular assays, because their wide availability and high sensitivity could cause "false-positive" results by contamination with amplified DNA sequences. They totally support the conclusion made by THOMPSON and MELONI (1993) that the molecular data must be fairly interpreted by collaborating molecular biologists, parasitologists, and epidemiologists - and clinicians as well - to avoid forming of a confusing picture of genetic diversity of the parasites with no practical application.

Wydawca

-

Rocznik

Tom

41

Numer

1

Opis fizyczny

s.3-11, bibliogr.

Twórcy

autor
  • Akademia Medyczna, 61-701 Poznan, ul.Fredry 10

Bibliografia

  • ABBASZADEGAN M., GERBA CH. P., ROSE J. B. 1991. Detection of Giardia cysts with a cDNA probe and applications to water samples. Appl. Environ. Microbiol. 57: 927-931.
  • ARCHIBALD S. C., MITCHELL R. W., UPCROFT J. A., BOREHAM P. F. L., UPCROFT P. 1991. Variation between human and animal isolates of Giardia as demonstrated by DNA fingerprinting. Int. J. Parasitol. 21: 123-124.
  • BINZ N., THOMPSON R. C. A., MELONI B. P., LYMBERY A. J. 1991. A simple method for cloning Giardia duodenalis from cultures and fecal samples. J. Parasitol. 77: 627-631.
  • BROOKFIELD J. F. Y. 1992. DNA fingerprinting in clonal organisms. Mol. Ecol. 1: 21-26.
  • BUSCH M. P. 1991. The need for rigorous molecular epidemiology. AIDS 5: 1379-1380.
  • BUTCHER P. D., FARTHING M. J. G. 1988. DNA probes for the faecal diagnosis of Giardia lamblia infections in man. Bioch. Soc. Trans. 17: 363-364.
  • CAMPBELL S. R., VAN KEULEN H., ERLANDSEN S. L., SENTURIA J. B., JARROLL E. L. 1990. Giardia sp.: comparison of electrophoretic karyotypes. Exp. Parasitol. 71: 470-482.
  • CARVALHO G. R., MACLEAN N., WRATTEN S. D., CARTER R. E., THURSTON J. P. 1991. Dilferentiation of aphid clones using DNA fingerprint from individuals aphids. Proc. R. Soc. Lond. B. 243: 109-114.
  • DAVIS J. P. 1993. Cryptosporidium: the Milwaukee outbreak. Abstracts, 80th Annual Meeting IAMFES. Atlanta, August 1993: 48-49.
  • DE JONCKHEERE J. F., GORDTS B., KASPRZAK W., MAJEWSKA A. C., MICHELS P. A. M. 1989. Cloning of a 1.8 kb repeated sequence for the identification and comparison of Giardia intestinalis isolates. Europ. J. Protistol. 24: 162-167.
  • - MAJEWSKA A. C., KASPRZAK W. 1990. Giardia isolates from primates and rodents display the same molecular polymorphism as human isolates. Mol. Biochem. Parasitol. 39: 23-28.
  • DYKSTRA C. C., BLAGBURN B. L., TIDWELL R. R. 1991. Construction of genomic libraries of Cryptosporidium parvum and identification of antigen-encoding genes. J. Protozool. 38: 76S-78S.
  • EY P. L., DAVEY R. A., DUFFIELD G. A. 1992. A low-affinity nucleobase transporter in the protozoan parasite Giardia intestinalis. Biochim. Biophys. Acta 1109: 179-186.
  • - ANDREWS R. H., MAYRHOFER G. 1993a. Differentiation of major genotypes of Giardia intestinalis by polymerase chain reaction analysis of a gene encoding a trophozoite surface antigen. Parasitology 106: 347-356.
  • - DARBY J. M., ANDREWS R. H., MAYRHOFER G. 1993b. Giardia intestinalis: Detection of major genotypes by restriction analysis of gene amplification products. Int. J. Parasitol. 23: 591-600.
  • - KHANNA K., ANDREWS R. H., MANNING P. A., MAYRHOFER G. 1993c. Distinct genetics groups of Giardia intestinalis distinguished by restriction fragment length polymorphisms. J. Gen. Microbiol. 138: 2629-2637.
  • - - MANNING P. A., MAYRHOFER G. 1993d. A gene encoding a 69-kilodalton major surface protein of Giardia intestinalis trophozoites. Mol. Bioch. Parasitol. 58: 247-258.
  • - MAYRHOFER G. 1993e. Two genes encoding homologous 70-kDa surface proteins are present within individual trophozoites of the binucleate parasite Giardia intestinalis. Gene 129: 257-262.
  • HEALY G. R. 1978. The presence and absence of Giardia lamblia in studies on parasite prevalence in the U.S.A. In: Waterborne Transmission of Giardiasis. Proceed. Symp. September 18-20, 1978, Cincinnati, Ohio, BPA: 92-103.
  • HOMAN W. L., VAN ENCKEVORT F. H. J, LIMPER L., VAN EYS G. J. J. M., SCHOONE G. J., KASPRZAK W., MAJEWSKA A. C., VAN KNAPEN F. 1992. Comparison of Giardia isolates from different laboratories by isoenzyme analysis and recombinant DNA probes. Parasitol. Res. 78: 316-323.
  • ISAAC-RENTON J. L., CORDEIRO C., SARAFIS K., SHAHRIARI H. 1993. Characterization of Giardia duodenalis isolates from a waterborne outbreak. J. Infect. Dis. 167: 431-440.
  • JOHNSON D. W., PIENIAZEK N., ROSE J. B. 1993. DNA probe hybridization and PCR detection of Cryptosporidium compared to immunofluorescence assay. Int. J. Parasitol. 20: 141-147.
  • LAXER M. A., TIMBLIN B. K., PATEL R. J. 1991. DNA sequences for the specific detection of Cryptosporidium parvum by the polymerase chain reaction. Am. J. Trop. Med. Hyg. 45: 688-694.
  • MAHBUBANI M. H., BEJ A. K., PERLIN M., SCHAFFER F. W., JAKUBOWSKI W., ATLAS R. M. 1991. Detection of Giardia cysts by using the polymerase chain reaction and distinguishing live from dead cysts. Appl. Env. Microbiol. 57: 3456-3461.
  • - - - - - - 1992. Differentiation of Giardia duodenalis from other Giardia spp. by using polymerase chain reaction and gene probes. J. Clin. Microbiol. 30: 74-78.
  • MEAD J. R., ARROWOOD M. J., CURRENT W. L., STERLING C. R. 1988. Field inversion gel electrophoretic separation of Cryptosporidium spp. chromosome-sized DNA. J. Parasitol. 74: 366-369.
  • MELONI B. P., LYMBERY A. J., THOMPSON R. C. A. 1988. Isoenzyme electrophoresis of 30 isolates of Giardia from humans and felines. Am. J. Trop. Med. Hyg. 38: 65-73.
  • - - - 1989. Characterization of Giardia isolates using a non-radiolabeled DNA probe, and correlation with the results of isoenzyme analysis. Ibid. 40: 629-637.
  • MORGAN U. M., CONSTANTINE C. C., GREENE W. K., THOMPSON R. C. A. 1993. RAPD (random amplified polymorphic DNA) analysis of Giardia DNA and correlation with isoenzyme data. Trans. Roy. Soc. Trop. Med. Hyg. 87: 702-705.
  • NASH T. E., MCCUTCHAN T., KEISTER D., DAME J. B., CONRAD J. D., GILLIN F. D. 1985. Restriction-endonuclease analysis of DNA from 15 Giardia isolates obtained from humans and animals. J. Infect. Dis. 152: 64-73.
  • NELSON R. G., KIM K., GOOZÉ L., PETERSEN C., GUT J. 1991. Identification and isolation of Cryptosporidium parvum genes encoding microtubule and microfilament proteins. J. Protozool.. 38: 52S-55S.
  • ORTEGA Y. R., SHEEHY R. R., CAMA V. A., OISHI K. K., STERLING C. R. 1991. Restriction fragment length polymorphism analysis of Cryptosporidium parvum isolates of bovine and human origin. Ibid. 38: 40S-41S.
  • PETERSEN C., GUT J., LEECH J. H, NELSON R. G. 1992. Identification and initial characterization of five Cryptosporidium parvum sporozoite antigen genes. Infect. Immun. 60: 2343-2348.
  • THOMPSON R. C. A. 1992. Giardiasis. In: Zoonoses and Foodborne Diseases. Postgraduate Foundation in veterinary Science, University of Sydney: 89-91.
  • - LYMBERY A. J., MELONI B. P. 1990a. Genetic variation in Giardia Künstler, 1882: taxonomic and epidemiological significance. Protozool.. Abs. 14: 1-28.
  • - - - BINZ N. 1990b. The zoonotic transmission of Giardia species. Vet. Res. 126: 513-514.
  • - MELONI B. P. 1993. Molecular variation in Giardia. Acta Tropica 53: 167-184.
  • UPCROFT P., MITCHELL R., BOREHAM P. L. 1990. DNA fingerprinting of the intestinal parasite Giardia duodenalis with the M13 phage genome. Int. J. Parasitol. 20: 319-323.
  • VAN BELKUM A., HOMAN W., LIMPER L., QUINT W. G. V. 1993. Genotyping isolates and clones of Giardia duodenalis by polymerase chain reaction: implications for the detection of genetic variation among protozoan parasite species. Mol. Bioch. Parasitol. 61: 69-78.
  • WEBER R., BRYAN R. T., BISHOP H. S., WAHLQUIST S. P., SULLIVAN J. J., JURANEK D. D. 1991. Treshold of detection of Cryptosporidium oocysts in human stool specimens: evidence for low sensitivity of current diagnostic methods. J. Clin. Microbiol. 29: 1323-1327.
  • WEBSTER K. A. 1993. Molecular methods for the detection and classification of Cryptosporidium. Parasitol. Today 9: 263-266.

Typ dokumentu

Bibliografia

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Identyfikator YADDA

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