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1998 | 45 | 1 |

Tytuł artykułu

Nucleosomes and regulation of gene expression. Structure of the HIV-1 5'LTR

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
Packaging of DNA into chromatin adds complexity to the problem of regulation of gene expression. Nucleosomes affect the accessibility of transcription factors to occupy their binding sites in chromatin of eukaryotic cells. The disruption of nucleosome structure within the enhancer/promoter region of the integrated HIV-1 proviral genome is an instructive example of a chromatin remodeling process during transcriptional activation. To investigate the mechanism responsible for generating nuclease hypersensitive sites that exist in vivo in the promoter/enhancer region of the 5'LTR (long terminal repeat) of integrated HIV-1 we have utilized an in vitro chromatin assembly system with Xenopus oocyte extracts. Chromatin assembly in the presence of Sp1 and NFκB transcription factors induces DNase I hypersensitive sites on either side of their binding sites and positions the adjacent nucleosomes. This structure can also be formed in a factor-induced, ATP-dependent chromatin remodeling process and closely resembles the in vivo chromatin structure. The DNase I hypersensitive sites that form within the HIV LTR are probably histone-free and remain after removal of transcription factors.

Wydawca

-

Rocznik

Tom

45

Numer

1

Opis fizyczny

p.209-219,fig.

Twórcy

autor
  • Institute of Oncology, Wybrzeze Armii Krajowej 15, 44-100 Gliwice, Poland
autor

Bibliografia

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  • 5. Romberg, RD. & Lorch, Y. (1995) Interplay between chromatin structure and transcrip­tion. Curr. Opin. CeU Biol 7, 371-375.
  • 6. Svaren, J. & Horz, W. (1996) Regulation of gene expression by nucleosomes. Curr. Opin. Gen. Dev. 6,164-170.
  • 7. Felsenfeld, G. (1996) Chromatin unfolds. Cell 86, 13-19.
  • 8. Kingston, R E., Bunker, C.A. & Imbalzano, A.N. (1996) Repression and activation by mul- tiprotein complexes that alter chromatin structure. Genes & Dev. 10, 905-920.
  • 9. Gross, D.S. & Garrard, W.T. (1988) Nuclease hypersensitive sites in chromatin. Annu. Rev. Biochem. 57, 159-197.
  • 10. Steger, D.J. & Workman, J.L. (1996) Remodel­ing chromatin structures for transcription: What happens to the histones? BioEssays 18, 875-884.
  • 11. Peterson, C.L. (1996) Multiple Switches to turn on chromatin. Curr. Opin. Gen. Dev. 6, 171-175.
  • 12. Pazin, M.J. & Kadonaga. J.T. (1997) SWI2/ SNF2 and related proteins: ATP-driven mo­tors that disrupt protein-DNA interactions? CeU 88, 737-740.
  • 13. Brownell, J.E. & Allis, C.D. (1996) Special HATs for special occasions: Linking histone acetylation to chromatin assembly and gene activation. Curr. Opin. Gen. Dev. 6, 176-184.
  • 14. Wade, P.A. & Wolffe, A.P. (1997) Chromatin: Histone acetyltransferases in control. Curr. Biol 7, R82-R84.
  • 15. Pazin, M.J. & Kadonaga, J.T. (1997) What's up and down with histone deacetylation and tran­scription? Cell 89, 325-328.
  • 16. Vaishnav, Y.N. & Wong-Staal, F. (1991) The biochemistry of AIDS. Annu. Rev. Biochem. 60, 577-630.
  • 17. Gaynor, R. (1992) Cellular transcription fac­tors involved in the regulation of HIV-1 gene expression. AIDS 6, 347-363.
  • 18. Jones, K.A. & Peterlin, B.M. (1994) Control of RNA initiation and elongation at the HIV-1 promoter. Annu. Rev. Biochem. 63, 717-743.
  • 19. Verdin, E. (1991) DNase I-hypersensitive sites are associated with both long terminal repeats and with the intragenic enhancer of integrated human immunodeficiency virus type 1. J. Vi­rol 65, 6790-6799.
  • 20. Verdin, E., Paras, P. & Van Lint, C. (1993) Chromatin disruption in the promoter of hu­man immunodeficiency virus type 1 during transcriptional activation. EMBO J. 12, 3249- 3259.
  • 21. Sheridan, P.L., Sheline, C.T., Cannon, K., Voz, M.L., Pazin, M.J., Kadonaga, J.T. & Jones, K.A. (1995) Activation of the HIV-1 enhancer by the LEF-1 HMG protein on nucleosome as­sembled DNA in vitro. Genes & Dev. 9, 2090-2104.
  • 22. Pazin, M.J., Sheridan, P.L., Cannon, K., Cao, Z., Keck, J.G., Kadonaga, J.T. & Jones, K.A. (1996) NF/cB-mediated chromatin reconfigura­tion and transcriptional activation of the HIV- 1 enhancer in vitro. Genes & Dev. 10, 37-49.
  • 23. Razvi, F., Gargiulo, G. & Worcel, A. (1983) A simple procedure for parallel sequence analy­sis of both strands of 5' labeled DNA. Gene 23, 175-183.
  • 24. Shimamura, A., Jessee, B. & Worcel, A. (1989) Assembly of chromatin with oocyte extracts. Methods Enzymol 170, 603-612.
  • 25. Widlak, P., Gaynor, R. & Garrard, W.T. (1997) in vitro chromatin assembly of the HIV-1 pro­moter; ATP-dependent polar repositioning of nucleosomes by Spl and NF/cB. J. Biol. Chem. 272,17654-17661.
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  • 27. Steger, D.J. & Workman. J.L. (1997) Stable co-occupancy of transcription factors and his- tones at the HIV-1 enhancer. EMBO J. 16, 2463-2472.
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Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

bwmeta1.element.agro-article-7081837b-fd95-42ba-a5de-4565f2704d10
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