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2006 | 58 | 2 |

Tytuł artykułu

Zastosowanie metody AFLP do oceny genetycznego podobienstwa szczepow Bordetella pertussis, Bordetella parapertussis oraz Bordetella bronchiseptica

Warianty tytułu

EN
Genetic diversity analysis of isolates belonging to Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica species

Języki publikacji

PL

Abstrakty

PL
Technikę AFLP (Amplified Fragment Length Polymorphism) zastosowano do identyfikacji gatunku і do oceny wewnątrzgatunkowej zmienności szczepów B. pertussis, В. parapertussis oraz В. bronchiseptica. Wykazano przydatność metody AFLP do określania gatunkowej przynależności szczepów B. pertussis, В. parapertussis і В. bronchiseptica oraz wewnątrzgatunkowego różnicowania szczepów B. pertussis i B. bronchiseptica.
EN
In this study, Amplified Fragment Length Polymorphism (AFLP) method was used to track differences among human and animal isolates of B. pertussis, B. parapertussis and B. bronchiseptica species. One hundred and sixty representative strains of these species orginated from international and Polish bacterial collections were genotyped according to AFLP involving EcoRl/Msel and Spel/Apal restriction/ligation/amplification procedures. This study has confirmed high potential AFLP Spel/Apal procedure for intra-species differentiation of B. pertussis and B. bronchiseptica strains. Both AFLP EcoRl/Msel and Spel/Apal procedures have been found to be useful for species-specific classification in case of B. pertussis strains. In case of B. bronchiseptica or B. parapertussis species-specific classification, Spel/Apal procedure has been found more precise than EcoRl/Msel one.

Wydawca

-

Rocznik

Tom

58

Numer

2

Opis fizyczny

s.143-153,rys.,tab.,bibliogr.

Twórcy

autor
  • Panstwowy Zaklad Higieny w Warszawie, ul.Chocimska 24, 00-791 Warszawa
autor

Bibliografia

  • 1. Advani A, Donnelly D, Hallander H. Reference system for characterization of Bordetella pertussis Pulsed-Field Gel Electrophoresis profiles. J Clin Microbiol. 2004; 42: 2890-7.
  • 2. Dworkin M, Sullivan P, Buskin S i inni. Bordetella bronchiseptica infection in human immunodeficiency virus-infected patients. Clin Infect Dis. 1999; 28: 1095-9.
  • 3. Gerlach G, von Wintzingerode F, Middendorf В, Gross R. Evolutionary trends in the genus Bordetella. Microbes and Infect. 2001; 3: 61-72.
  • 4. Grady R, Desai M, O 'Neill G i inni. Genotyping of epidemie Staphylococcus aureus phage type 15 isolates by fluorescent amplified fragment methicillin-resistant length polymorphism analysis. J Clin Microbiol. 1999; 37: 3198-203.
  • 5. Gzyl A, Augustynowicz E, Mosiej E i inni. Amplified fragment length polymorphism (AFLP) versus random amplified polymorphic DNA(RAPD) as a new tools for inter- and intra-species differentation within Bordetella. J Med. Microbiol. 2005; 54: 1-14.
  • 6. Huys G, Coopman R, Janssen P, Kersters K. High resolution genotypie analysis of the genus Aeromonas by AFLP fingerprinting. Int J System Bacteriol. 1996; 46: 572-80.
  • 7. Janssen P, Coopman R, Huys G i inni. Evaluation of the DNA fingerprinting method AFLP as a new tool in bacterial taxonomy. Microbiology. 1996; 142: 1881-93.
  • 8. Keil D, Fenwick В. Evaluation of canine Bordetlla bronchiseptica isolates using randomly amplified polymorphic DNA fingerprinting and ribotyping. Vet Microbiol. 1999; 66: 41-51
  • 9. Keim O, Kalif A, Schupp J i inni. Molecular evolution and diversity in Bacillus anthracis as detected by amplified fragment length polymorphism markers. J Bacteriol. 1997; 179: 818-24.
  • 10. Khattak M, Matthews R. Genetic relatedness of Bordetella species as determined by macrorestriction digests resolved by pulsed field electrophoresis. Int J Syst Bacteriol. 1993; 43: 659-64.
  • 11. Ko K S, Peck K R, Oh WS i inni. New Species of Bordetella, Bordetella ansorpii sp. nov., Isolated from the Purulent Exudate of an Epidermal Cyst. J Clin Microbiol. 2005; 43: 2516-9.
  • 12. Kokotovic B, Friis F, Jensen J, Ahrens P. Amplified-fragment length polymorphism fingerprinting of Mycoplasma species. J Clin Microbiol. 1999; 37: 3300-7.
  • 13. McLauchlin J, Ripabelli G, Brett M, Threlfall E. Amplified fragment length polymorphism (AFLP) analysis of Clostridium perfringens for epidemiological typing. Int J Food Microbiol. 2000; 56: 21-8.
  • 14. Mooi F, Hallander H, Wirstingvon König C i inni. Epidemiological typing of Bordetella pertussis isolates: recommendations for a standard methodology. Eur J Microbial Infect Dis. 2000; 19: 174- 81.
  • 15. Musser J, Hewlett E, Peppier M., Selander R. Genetic diversity and relationships in populations of Bordetella spp. J Bacteriol. 1986; 166: 230-7.
  • 16. Parkhill J, Sebaihia M, Preston A. Comparative analysis of the genome sequences of Bordetella pertussis, Bordetella parapertussis and Bordetella bronchiseptica. Nat Genet. 2003; 35: 32-40.
  • 17. Peppier M., Kuny S., Nevesinjac A i inni. Strain variation among Bordetella pertussis isolates from Quebec and Alberta Provinces of Canada from 1985 to 1994. J Clin Microbiol. 2003; 41: 3344-7.
  • 18. Preston A, Parkhill J, Maskell D. The Bordetellae: lessons from genomics. Nat Rev Microbiology. 2004; 2: 379-90.
  • 19. Restrepo S, Duque M, Tohme J, Verdier V. AFLP fingerprinting: an efficient technique for detecting genetic variation of Xanthomonas axonopodispv. manihotis. Microbiology. 1999; 145: 107-14.
  • 20. Sacco R, Register K, Nordholm G. Restriction endonuclease analysis discriminates Bordetella bronchiseptica isolates. J Clin Microbiol. 2000; 38: 4387-93.
  • 21. SchouIs L, Reulen S, Duim В i inni. Comparative genotyping of Campylobacter jejuni by amplified fragment length polymorphism, multilocus sequence typing, and short repeat sequencing: strain diversity, host range, and recombination. J Clin Microbiol. 2003; 41: 15-26.
  • 22. van der Zee A, Vernooij S, Peeters M i inni. Dynamics of the population structure of Bordetella pertussis as measured by IS 1002-associated RFLP: comparison of pre- and post-vaccination strains and global distribution. Microbiology. 1996; 142: 3479-85.
  • 23. van der Zee A, Groenedijk H, Peeters M, Mooi F. The differentiation of Bordetella parapertussis and Bordetella bronchiseptica from humans and animals as determined by DNA polymorphism mediated by two different insertion sequence elements suggests their phylogenetic relationship. Int J Syst Bacteriol. 1996; 46: 640-7.
  • 24. van Eldere J, Janssen P, Hoefnagels-Schauermans A i inni. Amplified-fragment length polymorphism analysis versus macrorestriction fragment analysis for molecular typing of Streptococcus pneumoniae isolate. J Clin Microbiolbiol. 1999; 37: 2053-7.
  • 25. van Loo I, Mooi F. Changes in the Dutch B. pertussis population in the first 20 years after the introduction of whole-cell vaccines. Microbiology. 2002; 148: 2011-8.
  • 26. Vos P Hogers R, Bleeker M i inni. AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res. 1995; 23: 4407-14.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

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