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1998 | 45 | 3 |

Tytuł artykułu

A cell-free yellow lupin extract containing activities of pseudouridine 35 and 55 synthases

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
Plant cytoplasmic tyrosine tRNA was pseudouridylated at three different positions: 35, 39 and 55. These pseudouridines were introduced by three different enzymes - pseudouridine synthases. Variants of the Arabidopsis thaliana pre-tRNATyr were constructed that allow to monitor specifically pseudouridylation at different nucleotide positions. Using such RNAs to assay pseudouridine synthesis we have prepared an extract from Lupinus luteus cv. Ventus seeds containing activities of at least Ψ35 and Ψ55 synthases. This is the first report describing the preparation of the lupin seed extract that specifically modifies plant pre-tRNATyr transcribed by T7 RNA polymerase. U35 is converted to Ψ35 only in an intron-dependent manner, while pseudouridylation of U55 is insensitive to the presence or absence of an intron.

Wydawca

-

Rocznik

Tom

45

Numer

3

Opis fizyczny

p.745-754,fig.

Twórcy

  • Poznan University, Miedzychodzka 5, 60-371 Poznan, Poland

Bibliografia

  • 1. Hopper, A.K. & Martin, N.C. (1992) Process­ing of yeast cytoplasmic and mitochondrial tRNAs; in The Molecular and Cellular Biology of the Yeast Saccharomyces: Gene Expression. (Jones, E.W., Pringle, J.R. & Broach, J.R., eds.) pp. 99-141, Cold Spring Harbor Labora­tory Press, NY.
  • 2. Peebles, C.L., Gegenheimer, P. & Abelson, J. (1983) Precise excision of intervening se­quences from precursor tRNAs by a mem­brane-associated yeast endonuclease. Cell 32, 525-536.
  • 3. Grosjean, H., Szweykowska-Kulinska, Z., Mo- torin, Y., Fasiolo, F. & Simos, G. (1997) Intron dependent enzymatic formation of modified nucleotides in eukaryotic tRNAs: A review.
  • 4. Johnson, P.F. & Abelson, J. (1983) The yeast tRNA** gene intron is essential for correct modification of its tRNA product. Nature 302, 681-687.
  • 5. Szweykowska-Kulinska. Z., Senger, B., Keith, G.. Fasiolo, F. & Grosjean, H. (1994) Intron- dependent formation of pseudouridines in the anticodon of Saccharomyces cereuisiae minor tRNAUe. EMBO J. 13, 4636-4644.
  • 6. Grosjean, H., Droogmans, L., Giege. R. & Uh-lenbeck, O.C. (1990) Guanosine modificationsin runoff transcripts of synthetic transfer PheRNA genes microinjected into Xenopus oo­cytes. Biochim. Biophys. Acta 1050, 267-273.
  • 7. Strobel, M.C. & Abelson, J. ( 1986) Effect of in­tron mutations on processing and function of Saccharomyces cerevisiae SUP53 tRNA in vitro and in vivo. Mol Cell Biol. 6, 2662-2673.
  • 8. Melton, D.A., DeRobertis, E.M. & Cortese, R. (1980) Order and intracellular location of the events involved in the maturation of spliced tRNA. Nature 284, 143-148.
  • 9. Yukawa, Y., Sugita, M., Sugiura, M. (1997) Ef­ficient in vitro transcription of plant nuclear tRNA(Ser) genes in a nuclear extract from to­bacco cultured cells. Plant J. 12, 965-970.
  • 10. Szweykowska-Kulińska, Z., Krajewski, J. & Wypijewski, K. (1995) Mutations of Arabidop- sis thaliana pre-tRNATyr affecting pseudouri- dylation of U35. Biochim. Biophys. Acta 1264, 87-92.
  • 11. Stange, N. & Beier, H. (1987) A cell-free plant extract for accurate pre-tRNA processing, splicing and modification. EMBO J. 6, 2811-2818.
  • 12. Guranowski, A. & Pawelkiewicz, J. (1977) Adenosylhomocysteinase from yellow lupin seeds. Eur. J. Biochem. 80, 517-523.
  • 13. Kunkel, T.A., Roberts, J.D. & Zakour, R.A. (1987) Rapid and efficient site-specific muta­genesis without phenotypic selection. Methods EnzymoL 154, 367-382.
  • 14. Hattori, M. & Sakaki, Y. (1986) Dideoxy se­quencing method using denaturated plasmid templates. Anal Biochcm. 152. 232-238.
  • 15. Nurse, K., Wrzesiński, J., Bakin, A., Lane, B.G. & Ofengand, J. (1995) Purification, clon­ing and properties of the tRNA synthase from Escherichia coli. RNA 1, 102-112.
  • 16. Szweykowska-Kulińska, Z. & Beier, H. (1992) Sequence and structure requirements for the biosynthesis of pseudouridine 0f35) in plant pre-tRNA1^1*. EMBO J. 11, 1907-1912.
  • 17. Sprinzl, M., Steegboren, C., Hubel, F. & Stein­berg, S. (1996) Compilation of tRNA se­quences and of tRNA genes. Nucleic Acids Res. 24, 68-72.
  • 18.Samuelsson, T. & Olsson, M. (1990) Transfer RNA pseudouridine synthases in Saccharomy- ces cerevisiae. J. Biol, Chem. 265,8782-8787.
  • 19. Nishikura, K. & De Robertis, E.M. (1981) RNA processing in microinjected Xenopus oocytes. Sequential addition of base modifications in a spliced transfer RNA. J. Mol Biol. 145, 405-420.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

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