PL EN


Preferencje help
Widoczny [Schowaj] Abstrakt
Liczba wyników

Czasopismo

2003 | 48 | 4 |

Tytuł artykułu

Mitochondrial control region variability of baiji and the Yangtze finless porpoises, two sympatric small cetaceans in the Yangtze River

Autorzy

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
Baiji Lipotes vexillifer (Miller, 1918) and the Yangtze finless porpoise Neophocaena phocaenoides asiaeorientalis (Pilleri and Gihr, 1972) are two sympatric small cetaceans inhabiting the middle and lower reaches of the Yangtze River. In this study, a fragment (420-428 bp) of the mitochondrial control region was sequenced to provide the first comparative survey of genetic variability and population structure in these two endan­gered species, with samples of finless porpoises from the Yellow/Bohai Sea, East China Sea, and South China Sea also included. Low values of haplotype diversity and nucleotide diversity were found for both species, especially for the baiji and the Yangtze River and South China Sea populations of finless porpoises. The analysis of molecular variance (AMOVA) supported a high level of overall genetic structure among three porpoise populations in Chinese waters, with greatest differences found between either the Yangtze River population or the Yellow Sea population and the South China Sea population. The differentiation between the Yangtze and Yellow Sea populations was not significant, and the males have higher genetic differentiation than the females, suggesting a significant female-biased dispersal between these two populations. This study showed that the Yangtze finless porpoise, unlike the sympatric baiji, was not a genetically isolated population. The Yangtze and Yellow Sea porpoises should be included in the same management unit, but further studies using more samples and especially based on more molecular markers are urgently needed to confirm this.

Wydawca

-

Czasopismo

Rocznik

Tom

48

Numer

4

Opis fizyczny

p.469-483,fig.

Twórcy

autor
  • Nanjing Normal University, Nanjing 210097, China
autor
autor
autor
autor

Bibliografia

  • Anderson S., Bankier A. T., Barrell B. G., de Bruijn M. H., Coulson A. R., Drouin J., Eperon I. C., Nierlich D. P., Roe B. A., Sanger F., Schreier P. H., Smith A. J., Staden R. and Young I. G. 1981. Sequence and organization of the human mitochondrial genome. Nature 29: 457-465.
  • Baker C. S., Medrano-Gonzalez L., Calambokidis J., Perry A., Pichler F. B., Rosenbaum H., Straley J. M., Urban-Ramirez J., Yamaguchi M. and Ziegesar O. V. 1998. Population structure of nuclear and mitochondrial DNA variation among humback whales in the North Pacific. Molecular Ecology 7: 695-708.
  • Crandall K. A. and Templeton A. R. 1993. Empirical tests of some predictions from coalescent theory with application to intraspecific phylogeny reconstruction. Genetics 134: 959-969.
  • Donnelly P. and Tavare S. 1986. The ages of alleles and a coalescent. Advances in Applied Probability 18: 1-19.
  • Escorza-Trevino S. and Dizon A. E. 2000. Phylogeography, intraspecific structure and sex-biased dispersal of Dall's porpoise, Phocoenoides dalli, revealed by mitochondrial and microsatellite DNA analyses. Molecular Ecology 9: 1049-1060.
  • Excoffier L. and Smouse P. E. 1994. Using allele frequencies and geographic subdivision to reconstruct gene tree within a species: molecular variance parsimony. Genetics 166: 343-359.
  • Exoffier L., Smouse P. E. and Quattro J. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA data. Genetics 131: 479-491.
  • Gao A. and Zhou K. 1995. Geographical variation of external measurements and three subspecies of Neophocaena phocaenoides in Chinese waters. Acta Theriologica Sinica 15(2): 81-92.
  • Jin X. 1985. Evolvement of ancient climate and oceans in Pliocene and the Quaternary Period. [In: Fundamentals of ancient oceanography. The Department of Oceanography and Geology, ed]. Publishing House of Tongji University, Shanghai: 1-225.
  • Kasuya T. 1999. Finless porpoises Neophocaena phocaenoides (G. Cuvier, 1829). [In: Handbook of marine mammals: the second book of dolphins and the porpoises. S. H. Ridgway and R. Harrison, eds]. Academic Press, London, United Kingdom 6: 411-442.
  • Kumar S., Tamura K., Jakobsen I. and Nei M. 2001. MEGA: molecular evolutionary genetics analysis software, ver 2.0. Bioinformatics 17: 1244-1245.
  • Lyrholm T., Leimar O., Johanneson B. and Gyllensten U. 1999. Sex-biased dispersal in sperm whales: contrasting mitochondrial and nuclear genetic structure of global populations. Proceeding of Royal Society of London, Series B, Biological Science 22(266): 347-354.
  • Moritz C. 1994. Defining 'Evolutionarily Significant Units' for conservation. TREE 9: 373-375.
  • Murray B. W., McClymont R. A. and Strobeck C. 1995. Forensic identification of ungulate species using restriction digests of PCR amplified mitochondrial DNA. Journal of Forensic Sciences 40: 943-951.
  • Pichler F., Dauson S., Slooten E. and Baker C. S. 1998. Geographic isolation of Hector's dolphin populations described by mitochondrial DNA sequences. Conservation Biology 12: 676-682.
  • Pichler F. and Baker C. S. 2000. Loss of genetic diversity in the endemic Hector's dolphin due to fisheries-related mortality. Proceeding of Royal Society of London, Series B, Biological Science 267(1438): 97-102.
  • Reeves R., Jefferson T., Kasuya T., Smith B., Wang D., Wang P., Wells R., Wursig B. and Zhou K. 2000. Yangtze River population of finless porpoises (Neohpocaena phocaenoides). [In: Biology and conservation of freshwater cetaceans in Asia. R. R. Reeves, B. D. Smith and T. Kasuya, eds]. IUCN Occasional Papers, Gland, Switzerland: 67-80.
  • Rosel P. E., Dizon A. E. and Haygood G. 1995. Variability of the mitochondrial control region in populations of the harbour porpoise, Phocoena phocoena, on interoceanic and regional scales. Canadian Journal of Fisheries and Aquatics 52: 1421-1429.
  • Rosel P. E., France S. C., Wang J. Y. and Kocher T. D. 1999. Genetic structure of harbor porpoise, Phocoena phocoena, populations in the Northwest Atlantic based on mitochondrial and nuclear markers. Molecular Ecology 8: 41-54.
  • Rosel P. E. and Rojas-Bracho L. 1999. Mitochondrial DNA variation in the critically endangered vaquita Phocoena sinus Norris and Macfarland, 1958. Marine Mammal Science 15: 990-1003.
  • Rosenbaum H. C., Brownwell R. L., Brown M. W., Schaeff C., Portway V., White B. N., Malik S., Pastene L. A., Patenaude N. J., Baker C. S., Goto M., Best P. B., Clapham P. J., Hamilton P., Moore M., Payne R., Rowntree V., Tynan C. T., Bannister J. L. and DeSalle R. 2000. World wide genetic differentiation of Eubalaena: questioning the number of right whale species. Molecular Ecology 9: 1793-1802.
  • Rozas J. and Rozas R. 1999. DnaSP 3: an integrated program for molecular population genetics and molecular evolution analysis. Bioinformatics 15: 174-175.
  • Secchi E. R., Wang J. Y., Murray B. W., Rocha-Campos C. C. and White B. N. 1998. Population differentiation in the franciscana (Pontoporia blainvillei) from two geographic locations in Brazilas determined from mitochondrial DNA control region sequences. Canadian Journal of Zoology 76: 1622-1627.
  • Slatkin M. and Maddison W. P. 1989. A cladistic measure of gene flow inferred from phylogenies of alleles. Genetics 123: 603-613.
  • Takahata N. 1988. The coalescent in two partially isolated diffusion populations. Genetics Research 52: 213-222.
  • Thompson J. D., Gibson T. J., Plewniak F., Jeanmougin F. and Higgins D. G. 1997. The Clustal X interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Research 24: 4876-4882.
  • Wang J. Y., Chou C. L. and White B. N. 1999. Mitochondrial DNA analysis of sympatric morphotypes of bottlenose dolphins (genus: Tursiops) in Chinese waters. Molecular Ecology 8: 1603-1612.
  • Whitehead H. 1998. Cultural selection and genetic diversity in matrilineal whale. Science 282: 1708-1711.
  • Yang G., Ren W., Zhou K., Liu S., Ji G., Yan J. and Wang L. 2002a. Population genetic structure of finless porpoises, Neophocaena phocaenoides, in Chinese waters, inferred from mitochondrial control region sequences. Marine Mammal Science 18: 336-347.
  • Young G. and Zhou K. 2000. A preliminary study on the variability of the mitochondrial DNA control region in populations of finless porpoises (Neophocaena phocaenoides) in Chinese waters. [In: Biology and conservation of freshwater cetaceans in Asia. R. R. Reeves, B. D. Smith and T. Kasuya, eds]. IUCN Occasional Papers, Gland, Switzerland: 86-91.
  • Yang G., Zhou K., Ren W., Ji G., Liu S., Bastida R. and Rivero L. 2002b. Molecular systematics of river dolphins inferred from complete mitochondrial cytochrome b gene sequences. Marine Mammal Science 18: 20-29.
  • Yang G., Zhou K., Xu X. and Leatherwood S. 1999. A survey on the incidental catches of small cetaceans in China. Chinese Journal of Applied Ecology 10: 713-716.
  • Yoshida H., Yoshioka M., Shirakihara M. and Chow C. L. 2001. Population structure of finless porpoises (Neophocaena phocaenoides) in coastal waters of Japan based on mitochondrial DNA sequences. Journal of Mammalogy 82: 123-130.
  • Zhang X., Liu R., Zhao Q., Zhang G., Wei Z., Wang X. and Yang J. 1993. The population status of finless porpoise in the middle and lower reach of the Yangtze River. Acta Theriologica Sinica 13: 260-270. [In Chinese with English summary]
  • Zhang X. and Wang K. 1999. Population variability analysis of the Yangtze finless porpoises. Acta Ecologica Sinica 19: 529-533. [In Chinese with English summary]
  • Zhou K. 2000. Baiji. [In: Encyclopedia of marine mammals. W. Perrin, B. Wursig and H. G. M. Thewissen, eds]. Academic Press, USA.: 58-61.
  • Zhou K., Yang G., Gao A., Sun J. and Xu X. 2000. Abundance and distribution of finless porpoise in the Nanjing-Hukou section of the lower Yangtze River. [In: Biology and conservation of freshwater cetaceans in Asia. R. R. Reeves, B. D. Smith and T. Kasuya, eds]. IUCN Occasional Papers, Gland, Switzerland: 91-96.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

bwmeta1.element.agro-article-41febd54-89ae-4a99-bf93-2730801fd8b2
JavaScript jest wyłączony w Twojej przeglądarce internetowej. Włącz go, a następnie odśwież stronę, aby móc w pełni z niej korzystać.