Comparison of the nucleotide sequences of wheat dwarf virus (WDV) isolates from Hungary and Ukraine

• Autorzy: Tobias I. , Shevchenko O. , Kiss B. , Bysov A. , Snihur H. , Polischuk V. , Salanki K. , Palkovics L.
• Języki publikacji: EN

Abstrakty

EN

Wheat dwarf virus (WDV) is the most ubiquitous virus in cereals causing huge losses in both Hungary and Ukraine. The presence of barleyand wheat-adapted strains has been confirmed, suggesting that the barley strain is restricted to barley, while the wheat strain is present in both wheat and barley plants. Five WDV isolates from wheat plants sampled in Hungary and Ukraine were sequenced and compared with known WDV isolates from GenBank. Four WDV isolates belonged to the wheat strain. Our results indicate that WDV-Odessa is an isolate of special interest since it has originated from wheat, but belongs to the barley-adapted strain, providing novel data on WDV biology and raising issues of pathogen epidemiology.

Słowa kluczowe

EN

comparison; nucleotide sequence; wheat dwarf virus; isolate; cereal; plant infection; loss; pathogen; epidemiology; Hungary; Ukraine

• Wydawca: -
• Czasopismo: Polish Journal of Microbiology
• Rocznik: 2011
• Tom: 60
• Numer: 2
• Opis fizyczny: p.125-131,fig.,ref.

Twórcy

autor

Tobias I.

• Plant Protection Institute, Hungarian Academy of Sciences; H-1525 Budapest, P.O.Box 102, Hungary

autor

Shevchenko O.

autor

Kiss B.

autor

Bysov A.

autor

Snihur H.

autor

Polischuk V.

autor

Salanki K.

autor

Palkovics L.

Bibliografia

• Achon M.A., L. Serrano, L. Ratti and C. Rubies-Autonell. 2006. First detection of Wheat dwarf virus in barley in Spain associated with an outbreak of barley yellow dwarf. Plant Dis. 90: 970.
• Bendahmane M., H-J. Schalk and B. Gronenborn. 1995. Identification and characterization of wheat dwarf virus from France using a rapid method for geminivirus DNA preparation. Phytopathology 85: 1449–1455.
• Bisztray Gy., R. Gáborjányi and J. Vacke. 1989. Isolation and characterisation of wheat dwarf virus found for the first time in Hungary. J. Plant. Dis. Protect. 96: 449–454.
• Commandeur U. and W. Huth. 1999. Differentiation of strains of wheat dwarf virus in infected wheat and barley plants by means of polymerase chain reaction. J. Plant. Dis. Protect. 106: 550–552.
• Fauquet C.M., R.W. Briddon, J.K. Brown, E. Moriones, J. Stanley, M. Zerbini and X. Zhou. 2008. Geminivirus strain demarcation and nomenclature. Arch. Virol. 153: 783–821.
• Gutierrez C. 1999. Geminivirus DNA replication. Cell. Mol. Life Sci. 56: 313–329.
• Haible D., S. Kober and H. Jeske. 2006. Rolling circle amplification revolutionizes diagnosis and genomics of geminiviruses. J. Virol. Meth. 135: 9–16.
• Heyraud F., V. Matzeit, M. Kammann, S. Schaefer, J. Schell and B. Gronenborn. 1993. Identification of the initiation sequence for viral-strand DNA synthesis of wheat dwarf virus. EMBO J. 12: 4445–4452.
• Huth W. 2000. Viruses of Gramineae in Germany – a short overview. J. Plant. Dis. Protect. 107: 406–414.
• Jezewska J. 2001. First report of Wheat dwarf virus occurring in Poland. Phytopath Polonica 21: 93–100.
• Jilaveanu A. and J. Vacke. 1995. Isolation and identification of wheat dwarf virus (WDV) in Romania. Probleme de Protectia Plantelor 23: 51–62.
• Kammann M., H.J. Schalk, V. Matzeit, S. Schaefer, J. Schell and B. Gronenborn. 1991. DNA replication of wheat dwarf virus, a gemini virus, requires two cis-acting signals. Virology 184: 786–790.
• Kapooria R.G. and J. Ndunguru. 2004. Occurrence of viruses in irrigated wheat in Zambia. EPPO/OEPP Bulletin 34: 413–419.
• Köklü G., J.N.E. Ramsell and A. Kvarnheden. 2007. The complete genome sequence for a Turkish isolate of Wheat dwarf virus (WDV) from barley confirms the presence of two distinct WDV strains. Virus Genes 34: 359–366.
• Kundu J.K., S. Gadiou and G. Cervená. 2009. Discrimination and genetic diversity of Wheat dwarf virus in Czech Republic. Virus Genes 38: 468–474.
• Kvarnheden A., M. Lindblad, K. Lindsten and J.P.T. Valkonen. 2002. Genetic diversity of Wheat dwarf virus. Arch. Virol. 147: 205–216.
• Lemmetty A. and E. Huusela-Veistola. 2005. First report of Wheat dwarf virus in winter wheat in Finland. Plant Dis. 89: 912.
• Lindsten K. and B. Lindsten. 1993. Occurrence and transmission of Wheat dwarf virus (WDV) in France. In: Proceedings of third International Conference on Pest in Agriculture 7–9 December 1993, Montpellier, France, pp. 41–48.
• Lindsten K. and J. Vacke. 1991. A possible barley adapted strain of Wheat dwarf virus (WDV). Acta Phytopath. Entomol. Hung. 26: 175–180.
• Lindsten K, J. Vacke and B. Gerhardson. 1970. A preliminary report on three cereal virus diseases new to Sweden spread by Macrosteles and Psammotettix leafhoppers. Nat. Swedish Inst. Plant. Protec. Cent. 14: 285–297.
• Mechner S., B. Manurung, M. Grüntzig, A. Habekuss, W. Witsack and E. Fuchs. 2003. Investigations into the ecology of the Wheat dwarf virus (WDV) in Saxony-Anhalt, Germany. J. Plant Dis. Protect. 110: 313–323.
• Mesterházy Á., R. Gáborjányi, M. Papp and P. Fónad. 2002. Multiple virus infection of wheat in South Hungary. Cer. Res. Com. 30: 329–334.
• Najar A., K.M. Makkouk, H. Boudhir, S.G. Kumari, R. Zarouk, R. Bessai and F.B. Othman. 2000. Viral diseases of cultivated legume and cereal crops in Tunisia. Phyt. Medit. 39: 423–432.
• Razvyazkina G.M. 1975. Virus Diseases of Cereals – Novosibirsk, 1975 – 292 p. (in Russian)
• Sambrook J., E.F. Fritsch and T. Maniatis. 1989. Molecular Cloning. A Laboratory Manual. 2nd ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York.
• Schubert J., A. Habekuss, K. Kazmaier and H. Jeske. 2007. Surveying cereal-infecting geminiviruses in Germany – Diagnostics and direct sequencing using rolling circle amplification. Virus Research 127: 61–70.
• Shepherd D., PD Martin, P. Lefeuvre, A. Monjane, B. Owor, E.P. Rybicki and A. Varsani. 2008. A protocol for the rapid isolation of full geminivirus genomes from dried plant tissue. J. Virol. Meth. 149: 97–102.
• Snihur H., V. Polischuk and U. Kastirr. 2007. Dissemination of viruses of cereal crops in agrocoenosises of Ukraine. // 10 th International Plant Virus Epidemiology Symposium. 15–20 October 2007, ICRISAT, Hyderabad, India. P. 107.
• Stephanov J. and A. Dimov. 1981. Bolestta vdjudjavanje po spenittsata Bolgaria. Rasteniev Nauki 18: 124–128 (in Bulgarian with English summary).
• Szunics L., E. Pocsai, G. Vida, O. Veisz, L. Láng and Z. Bedő. 2003. Kalászos gabonák vírusok okozta betegségei 2002-ben. Növénytermelés 52: 33–39 (in Hungarian with English summary).
• Tóbiás I., B. Kiss and L. Palkovics. 2006. The nucleotide sequence of two Hungarian isolates of Wheat dwarf virus. Acta Phytopath. et Entomol. Hung. 41: 47–52.
• Tóbiás I., B. Kiss, É. Pájtli, G. Tholt and K. Salánki. 2008. Molecular characterization and transmission experiments with barley strain of Wheat dwarf virus. Növényvédelem 44(11), 545–552. (in Hungarian with English summary)
• Tóbiás I., B. Kiss, N. Bakardjieva and L. Palkovics. 2009. The nucleotide sequence of barley strain of Wheat dwarf virus isolated in Bulgaria. Cer. Res. Com. 37: 237–242.
• Tóbiás I., B. Kiss, K. Salánki and L. Palkovics. 2010. The nucleotide sequence of barley strain of Wheat dwarf virus isolated in Hungary. Cereal Research Communication 38: 67–74.
• Vacke J. 1961. Wheat dwarf virus. Biol. Plant. 3: 228–233.
• Xie J., X.Wang, Y. Liu, Y. Peng and G. Zyhou. 2007. First report of the occurrence of Wheat dwarf virus in wheat in China. Plant Dis. 91: 111.