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2015 | 159 | 01 |

Tytuł artykułu

Relacje genetyczne pomiędzy polskimi i referencyjnymi populacjami sosny zwyczajnej (Pinus sylvestris L.) z Europy w analizie polimorfizmu sekwencji nukleotydowych loci nDNA

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Treść / Zawartość

Warianty tytułu

EN
Genetic relationships between Polish and reference populations of Scots pine (Pinus sylvestris L.) in Europe based on nucleotide polymorphism study at nuclear loci

Języki publikacji

PL

Abstrakty

EN
Adaptation to local environmental gradients is one of main characteristics of living organisms. Scots pine (Pinus sylvestris L.) is the most widely distributed conifer in the world and main forest forming component in Europe. Based on genetic, morphological and growth performance traits, several local ecotypes of the species were distinguished across the species distribution range. The existence of local ecotypes differentiated at many adaptive and phenotypic traits provides unique opportunity for addressing the questions about the genetic basis of local adaptation across the species distribution range. However, information about the underlying population structure between ecotypes is needed for efficient studies of adaptive variation at molecular level. The presented study focused on the genetic variation analysis between nineteen popu− lations of Scots pine from across geographical locations in Poland and eleven reference samples from Northern, Western and Southern Europe. The pattern of nucleotide polymorphisms at 673 polymorphic nucleotide sites found across twenty nine nuclear loci was studied to determine genetic relationship and population structure of different geographical locations. Genetic rela− tionships between populations were conducted based on Baysian assignment and conventional frequency based statistics at the within and between population level. The results indicate very uniform genetic background of Polish populations of the species that despite high phenotypic and ecological differentiation most likely share the same recolonization history. High genetic similarity was found between Polish and North European range of the species. In contrast, dif− ferentiation was found in relation to the reference populations from Scotland and Spain that in previous studies were shown to deviate from simple recolonization model after last glaciations and had unique mtDNA mitotypes not observed in continental continuous range of the species, respectively. Considering high differentiation at quantitative traits between northern and central part of the species range in Europe but very homogenous genetic background found in the presented study, it seems that this part of Scots pine distribution is particularly suitable for association genetic studies to find genomic regions that are involved in species adaptive and phenotypic variation.

Wydawca

-

Czasopismo

Rocznik

Tom

159

Numer

01

Opis fizyczny

s.53-61,rys.,tab.,bibliogr.

Twórcy

autor
  • Instytut Biologii Środowiska, Uniwersytet im.Adama Mickiewicza, ul.Umultowska 89, 61-614 Poznań
  • Instytut Dendrologii, Polska Akademia Nauk, ul.Parkowa 5, 62-035 Kórnik

Bibliografia

  • Austerlitz F., Mariette S., Machon N., Gouyon P. H., Godelle B. 2000. Effects of colonization processes on genetic diversity: Differences between annual plants and tree species. Genetics 154: 1309−1321.
  • Boratyński A. 1993. Systematics and geographical distribution. W: Białobok S., Boratyński A., Bugała W. [red.]. Biology of Scots pine. Sorus, Poznań – Kórnik.
  • Corander J., Tang J. 2007. Bayesian analysis of population structure based on linked molecular information. Mathematical Biosciences 205: 19−31.
  • Excoffier L. 2004. Patterns of DNA sequence diversity and genetic structure after a range expansion: lessons from the infinite−island model. Molecular Ecology 13: 853−864.
  • Excoffier L., Laval G., Schneider S. 2005. Arlequin ver. 3.0: An integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 1: 47−50.
  • Hurme P., Repo T., Savolainen O., Paakkonen T. 1997. Climatic adaptation of bud set and frost hardiness in Scots pine (Pinus sylvestris). Canadian Journal of Forest Research−Revue Canadienne De Recherche Forestiere 27: 716−723.
  • Hurme P., Sillanpaa M. J., Arjas E., Repo T., Savolainen O. 2000. Genetic basis of climatic adaptation in Scots pine by Bayesian quantitative trait locus analysis. Genetics 156: 1309−1322.
  • Karhu A., Hurme P., Karjalainen M., Karvonen P., Kärkkäinen K., Neale D., Savolainen O. 1996. Do molecular markers reflect patterns of differentiation in adaptive traits of conifers? Theoretical and Applied Genetics 93: 215−221.
  • Provan J., Soranzo N., Wilson N. J., McNicol J. W., Cottrell J., Powell W. 1998. Gene−pool variationin in caledonian and European Scots pine (Pinus sylvestris L.) revealed by chloroplast simple−sequence repeats. Proceedings of the Royal Society of London, Series B−Biological Sciences 265: 1697−1705.
  • Prus−Głowacki W., Urbaniak L., Bujas E., Curtu A. L. 2012. Genetic variation of isolated and peripheral populations of Pinus sylvestris (L.) from glacial refugia. Flora 207: 150−158.
  • Ray N., Currat M. Excoffier L. 2003. Intra−deme molecular diversity in spatially expanding populations. Molecular Biology and Evolution 20: 76−86.
  • Savolainen O., Pyhäjärvi T., Knürr T. 2007. Gene flow and local adaptation in trees. Annual Review of Ecology, Evolution, and Systematics 38: 595−619.
  • Shutyaev A. M., Giertych M. 1998. Height growth variation in a comprehensive Eurasian provenance experiment of (Pinus sylvestris L.). Silvae Genetica 46: 332−349.
  • Soranzo N., Alia R., Provan J., Powell W. 2000. Patterns of variation at a mitochondrial sequence−tagged−site locus provides new insights into the postglacial history of European Pinus sylvestris populations. Molecular Ecology 9: 1205−1211.
  • Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. 2011. MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Molecular Biology and Evolution 28: 2731−2739.
  • Wachowiak W., Balk P., Savolainen O. 2009. Search for nucleotide diversity patterns of local adaptation in dehydrins and other cold−related candidate genes in Scots pine (Pinus sylvestris L.). Tree Genetics & Genomes 5: 117−132.
  • Wachowiak W., Salmela M. J., Ennos R. A., Iason G., Cavers S. 2010. High genetic diversity at the extreme range edge: nucleotide variation at nuclear loci in Scots pine (Pinus sylvestris L.) in Scotland. Heredity 106: 775−787.
  • Weir B. S., Cockerham C. C. 1984. Estimating F−statistics for the analysis of population structure. Evolution 38: 1358−1370.
  • Wright S. I., Gaut B. S. 2005. Molecular population genetics and the search for adaptive evolution in plants. Molecular Biology and Evolution 22: 506−519.

Typ dokumentu

Bibliografia

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Identyfikator YADDA

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