Do plant chloroplasts contain histidine kinases?

• Autorzy: Lysenko E.A. , Pshybytko N. L. , Karavaiko N. N. , Yakovleva L. A. , Novikova G. V. , Kulaeva O. N. , Kusnetsov V. V.
• Języki publikacji: EN

Abstrakty

EN

Plastids are evolutionary descendants of cyanobacteria and retain many proteins of cyanobacterial origin including histidine kinases (HKs). Histidine kinases form a major group of protein kinases in cyanobacteria but a minor group in angiosperms; no HK has been detected in plant plastids so far. This raises the question: have higher plant plastids retained some cyanobacterial His/Asp regulatory systems or the latter have been replaced with Ser/Thr or Tyr protein kinases more typical for eukaryotes? To answer this question H1 antiserum against conservative phospho-acceptor motif of HKs was raised and applied for the analysis of different chloroplast fractions. In maize, three polypeptides with apparent molecular masses about 26, 27.5, and 28 kDa were revealed in thylakoid membranes. The results of in organello phosphorylation suggest that these proteins may be His-phosphorylated. Polypeptides with similar molecular masses were revealed in various mono- and dicotyledonous plants. Bioinformatic analysis demonstrated that in angiosperms these polypeptides might result from alternative transcription initiation and/or alternative processing of mRNAs of genes encoding well-known HKs. Besides, the genome of the moss Physcomitrella patens contains much more genes that could code for plastid HKs. The data obtained let us suppose that plastids of contemporary plants have HK(s) that could be involved in regulation of plastid gene expression.

• Wydawca: -
• Czasopismo: Acta Physiologiae Plantarum
• Rocznik: 2012
• Tom: 34
• Numer: 3
• Opis fizyczny: p.1153-1164,fig.,ref.

Twórcy

autor

Lysenko E.A.

• Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya 35, 127276 Moscow, Russia

autor

Pshybytko N. L.

• Institute of Biophysics and Cell Engineering, National Academy of Belarus, Akademicheskaya 27, 220072 Minsk, Belarus

autor

Karavaiko N. N.

• Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya 35, 127276 Moscow, Russia

autor

Yakovleva L. A.

• Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya 35, 127276 Moscow, Russia

autor

Novikova G. V.

• Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya 35, 127276 Moscow, Russia

autor

Kulaeva O. N.

• Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya 35, 127276 Moscow, Russia

autor

Kusnetsov V. V.

• Institute of Plant Physiology, Russian Academy of Sciences, Botanicheskaya 35, 127276 Moscow, Russia

Bibliografia

• Allen JF, Forsberg J (2001) Molecular recognition in thylakoid structure and function. Trends Plant Sci 6:317–326
• Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403–410
• Asakura Y, Hagino T, Ohta Y, Aoki K, Yonekura-Sakakibara K, Deji A, Yamaya T, Sugiyama T, Sakakibara H (2003) Molecular characterization of His-Asp phosphorelay signaling factors in maize leaves: Implications of the signal divergence by cytokinininducible response regulators in the cytosol and the nuclei. Plant Mol Biol 52:331–341
• Ashby MK, Houmard J (2006) Cyanobacterial two-component proteins: structure, diversity, distribution, and evolution. Microbiol Mol Biol Rev 70:472–509
• Bonen L (1993) Trans-splicing of pre-mRNA in plants, animals, and protists. FASEB J 7:40–46
• Bonen L (2008) Cis- and trans-splicing of group II introns in plant mitochondria. Mitochondrion 8:26–34
• Bruce BD (2000) Chloroplast transit peptides: structure, function and evolution. Trends Cell Biol 10:440–447
• Duplessis MR, Karol KG, Adman ET, Choi LYS, Jacobs MA, Cattolico RA (2007) Chloroplast His-to-Asp signal transduction: a potential mechanism for plastid gene regulation in Heterosigma akashiwo (Raphidophyceae). BMC Evol Biol 7:70. doi: 10.1186/1471-2148-7-70
• Dyall SD, Brown MT, Johnson PJ (2004) Ancient invasions: from endosymbionts to organelles. Science 304:253–257
• Ford RC, Evans MCW (1983) Isolation of a photosystem 2 preparation from higher plants with highly enriched oxygen evolution activity. FEBS Lett 160:159–164
• Forsberg J, Rosenquist M, Fraysse L, Allen JF (2001) Redox signaling in chloroplasts and mitochondria: genomic and biochemical evidence for two-component regulatory systems in bioenergetic organelles. Biochem Soc Trans 29:403–407
• Galperin MY, Nikolskaya AN, Koonin EV (2001) Novel domains of the prokaryotic two-component signal trancduction systems. FEMS Microbiol Lett 203:11–21
• Hwang I, Chen HC, Sheen J (2002) Two-component signal transduction pathways in Arabidopsis. Plant Physiol 129:500–515
• Kawasaki T, Okumura S, Kishimoto N, Shimada H, Higo K, Ichikawa N (1999) RNA maturation of the rice SPK gene may involve trans-splicing. Plant J 18:625–632
• Kleffmann T, Russenberger D, von Zychlinski A, Christopher W, Sjölander K, Gruissem W, Baginski S (2004) The Arabidopsis thaliana chloroplast proteome reveals pathway abundance and novel protein functions. Curr Biol 14:354–362
• Kodama Y, Sano H (2006) Evolution of a basic helix-loop-helix protein from a transcriptional repressor to a plastid-resident regulatory factor: involvement in hypersensitive cell death in tobacco plants. J Biol Chem 281:35369–35380
• Kodama Y, Sano H (2007) Functional diversification of a basic helix-loop-helix protein due to alternative transcription during generation of amphidiploidy in tobacco plants. Biochem J 403:493–499
• Krause GH, Weis E (1991) Chlorophyll fluorescence and photosynthesis: the basics. Annu Rev Plant Physiol Mol Biol 42:313–349
• Krupa A, Anamika, Srinivasan N (2006) Genome-wide comparative analyses of domain organisztion of repertoires of protein kinases of Arabidopsis thaliana and Oryza sativa. Gene 380:1–13
• Kumar BV, Lakshmi MV, Atkinson JP (1985) Fast and efficient method for detection and estimation of proteins. Biochem Biophys Res Commun 131:883–891
• Laemmli UK (1970) Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227:680–685
• Lichtenthaler HL (1987) Chlorophylls and carotenoids: pigments of photosynthetic biomembranes. Methods Enzymol 148:350–382
• Martin W, Rujan T, Richly E, Hansen A, Cornelsen S, Lins T, Leister D, Stoebe B, Hasegawa M, Penny D (2002) Evolutionary analysis of arabidopsis, cyanobacterial, and chloroplast genomes reveals plastid phylogeny and thousands of cyanobacterial genes in the nucleus. Proc Natl Acad Sci USA 99:12246–12251
• Mereschkowsky C (1905) Über Natur und Ursprung der Chromatophoren im Pflanzenreiche. Biologischen Centralblatte 25:593-604 (English translation in: Martin W, Kowallik KV (1999) Annotated english translation of Mereschkowsky’s 1905 paper ‘‘Über Natur und Ursprung der Chromatophoren im Pflanzenreiche‘‘. Eur J Phycol 34:287-295)
• Mount SM, Chang C (2002) Evidence for a plastid origin of plant ethylene receptor genes. Plant Physiol 130:10–14
• Moussatche P, Klee HJ (2004) Autophosphorylation activity of the arabidopsis ethylene receptor multigene family. J Biol Chem 279:48734–48741
• Pareek A, Singh A, Kumar M, Kushwaha HR, Lynn AM, Singla-Pareek SL (2006) Whole-genome analysis of Oryza sativa reveals similar architecture of two-component signaling machinery with arabidopsis. Plant Physiol 142:380–397
• Puthiyaveetil S, Kavanagh TA, Cain P, Sullivan JA, Newell CA, Gray JC, Robinson C, van der Giezen M, Rogers MB, Allen JF (2008) The ancestral symbiont sensor kinase CSK links photosynthesis with gene expression in chloroplasts. Proc Natl Acad Sci USA 105:10061–10066
• Schaller GE, Doi K, Hwang I, Kieber JJ, Khurana JP, Kurata N, Mizuno T, Pareek A, Shiu S-H, Wu P, Yip WK (2007) Nomenclature for two-component signaling elements in rice. Plant Physiol 143:555–557
• Schliebner I, Pribil M, Zühlke J, Dietzmann A, Leister D (2008) A survey of chloroplast protein kinases and phosphatases in Arabidopsis thaliana. Curr Genomics 9:184–190
• Stock AM, Robinson VL, Goudreau PN (2000) Two-component signal transduction. Annu Rev Biochem 69:183–215
• Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22:4673–4680
• Towbin H, Staehelin T, Gordon J (1979) Electrophoretic transfer of proteins from polyacrylamide gels to nitrocellulose sheets: procedure and some applications. Proc Natl Acad Sci USA 76:4350–4354
• Weber P, Fulgosi H, Piven I, Muller L, Krupinska K, Duong VH, Herrmann RG, Sokolenko A (2006) TCP34, a nuclear-encoded response regulator-like TPR protein of higher plant chloroplasts. J Mol Biol 357:535–549
• Wei Y-F, Matthews HR (1991) Identification of phosphohistidine in proteins and purification of protein-histidine kinases. Methods Enzymol 200:388–414
• Yeh K-C, Lagarias JC (1998) Eukaryotic phytochromes: Lightregulated serine/threonine protein kinases with histidine kinase ancestry. Proc Natl Acad Sci USA 95:13976–13981
• Yonekura-Sakakibara K, Kojima M, Yamaya T, Sakakibara H (2003) Molecular characterization of cytokinin-responsive histidine kinases in maize. Differential ligand preferences and response to cis-zeatin. Plant Physiol 134:1654–1661
• Zhang X, Zhao F, Guan X, Yang Y, Liang C, Qin S (2007) Genomewide survey of putative serine/threonine protein kinases in cyanobacteria. BMC Genomics 8:395. doi:10.1186/1471-2164-8-395
• Zorina A, Stepanchenko N, Novikova GV, Sinetova M, Panichkin VB, Moshkov IE, Zinchenko VV, Shestakov SV, Suzuki I, Murata N, Los DA (2011) Eukaryotic-like Ser/Thr protein kinases SpkC/F/K are involved in phosphorylation of GroES in the cyanobacterium Synechocystis. DNA Res 18:137–151

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