Comparative proteomic analysis of leaves, leaf sheaths, and roots of drought-contrasting sugarcane cultivars in response to drought stress

• Autorzy: Khueychai S. , Jangpromma N. , Daduang S. , Jaisil P. , Lomthaisong K. , Dhiravisit A. , Klaynongsruang S.
• Języki publikacji: EN

Abstrakty

EN

A better understanding of drought response proteins may improve our understanding of the mechanisms underlying drought tolerance in sugarcane. In this research, drought-tolerant (K86-161) and drought-sensitive (B34-164) sugarcane cultivars were grown and exposed to drought stress. The changes in protein expression in leafs, leaf sheaths and roots were analyzed using proteomics techniques. Proteins that responded to drought in both cultivars could be classified into four major categories, including energy and metabolism, photosynthesis, antioxidant, and defense protein. Interestingly, an increased abundance of fructose-bisphosphate aldolase under drought was observed in all three organs of K86- 161. Elevated expression of oxygen-evolving enhancer protein was also found in leaves and leaf sheaths of K86- 161, when compared with their controls. Additionally, SOD was abundant in the leaves and roots of K86-161. Importantly, the expression level of these proteins decreased in B34-164 under drought stress. These contrasting results suggest that these proteins were inhibited by drought stress in the drought-sensitive cultivar. This proteomic research is the first to combine analyses of leaves, leaf sheaths and roots in sugarcane, which may enhance our understanding of drought responses at the molecular level and lead to selective breeding for enhanced drought tolerance.

• Wydawca: -
• Czasopismo: Acta Physiologiae Plantarum
• Rocznik: 2015
• Tom: 37
• Numer: 04
• Opis fizyczny: Article: 88 [16 p.], fig.,ref

Twórcy

autor

Khueychai S.

• Department of Biochemistry, Faculty of Science, Khon Kaen University, Khon Kaen 40002, Thailand
• Protein and Proteomics Center for Commercial and Industrial Purposes (ProCCI), Khon Kaen University, Khon Kaen 40002, Thailand

autor

Jangpromma N.

• Protein and Proteomics Center for Commercial and Industrial Purposes (ProCCI), Khon Kaen University, Khon Kaen 40002, Thailand
• Office of the Dean, Faculty of Science, Khon Kaen University, Khon Kaen 40002, Thailand

autor

Daduang S.

• Department of Biochemistry, Faculty of Science, Khon Kaen University, Khon Kaen 40002, Thailand
• Protein and Proteomics Center for Commercial and Industrial Purposes (ProCCI), Khon Kaen University, Khon Kaen 40002, Thailand

autor

Jaisil P.

• Northeast Thailand Cane and Sugar Research center, Khon Kaen University, Khon Kaen 40002, Thailand

autor

Lomthaisong K.

• Department of Biochemistry, Faculty of Science, Khon Kaen University, Khon Kaen 40002, Thailand
• Protein and Proteomics Center for Commercial and Industrial Purposes (ProCCI), Khon Kaen University, Khon Kaen 40002, Thailand

autor

Dhiravisit A.

• Faculty of Humanities and Social Sciences, Khon Kaen University, Khon Kaen 40002, Thailand

autor

Klaynongsruang S.

• Department of Biochemistry, Faculty of Science, Khon Kaen University, Khon Kaen 40002, Thailand
• Protein and Proteomics Center for Commercial and Industrial Purposes (ProCCI), Khon Kaen University, Khon Kaen 40002, Thailand

Bibliografia

• Abbasi FM, Komatsu S (2004) A proteomic approach to analyze saltresponsive proteins in rice leaf sheath. Proteomics 4:2072–2081
• Ahsan N, Lee DG, Lee KW, Alam I, Lee SH, Bahk JD, Lee BH (2008) Glyphosate-induced oxidative stress in rice leaves revealed by proteomic approach. Plant Physiol Biochem46:1062–1070
• Ail S, Munir A, Hayat R, Ijaz SS (2005) Enhancing water use efficiency, fixation capacity of mash bean and soil profile nitrate content with phosphorus and potassium application. Agron J 4:340–344
• Ali GM, Komatsu S (2006) Proteomic analysis of rice leaf sheath during drought stress. J Proteome 5:396–403
• Aranjuelo I, Molero G, Erice G, Avice JC, Nogues S (2011) Plant physiology and proteomics reveals the leaf response to drought in alfalfa (Medicagosativa L.). J Exp Biol 62:111–123
• Azcarate-Peril MA, Bruno-Ba´rcena JM, Hassan HM, Klaenhammer TR (2006) Transcriptional and functional analysis of oxalylcoenzyme A (CoA) decarboxylase and formyl-CoA transferase genes from Lactobacillus acidophilus. Appl Environ Microbiol 72:1891–1899
• Balmer Y, Koller A, Val G, Schu¨rmann Buchanan BB (2004) Proteomics uncovers proteins interacting electrostatically with thioredoxin in chloroplasts. Photosynth Res 79:275–280
• Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248–302
• Caruso G, Cavaliere C, Guarino C, Gubbiotti R, Foglia P, Lagana A (2008) Identification of changes in Triticum durum L. leaf proteome in response to salt stress by two-dimensional electrophoresis and MALDI-TOF mass spectrometry. Anal Bioanal Chem 391:381–390
• Castillejo MA, Maldonado AM, Ogueta S, Jorrín JV (2008) Proteomic analysis of responses to drought stress in sunflower (Helianthus annuus) leaves by 2DE gel electrophoresis and mass spectrometry. The Open Proteomics J 1:59–71
• Chaves MM, Maroco JP, Pereira J (2003) Understanding plant responses to drought-from genes to the whole plant. Functional Plant Biol 30:239–264
• Chen F, Li Q, Sun L, He Z (2006) The rice14-3-3 gene family and its involvement in responses to biotic and abiotic stress. DNA Res 13:53–64
• Crafts-Brandner SJ, Salvucci ME (2000) Rubisco activase constrains the photosynthetic potential of leaves at high temperature and CO2. Plant Biol 97:13430–13435
• Deeba F, Pandey AK, Ranjan S, Mishra M, Sharma YK, Shirke PA, Pandey V (2012) Physiological and proteomic respones of cotton (Gossypium herbaceum L.) to drought stress. Plant Physiol Biochem 53:6–18
• Gazanchian A, Hajheidari M, Sima NK, Salekdeh GH (2007) Proteome response of Elymus elongatum to severe water stress and recovery. J Exp Bot 58:291–300
• Ghannoum O (2009) C4 photosynthesis and water stress. Ann Bot 103:635–644
• Hajheidari M, Abdollahian-Noghabi M, Askari H, Heidari M, Sadeghian SY, Ober ES, Salekdeh GH (2005) Proteome analysis of sugar beet leaves under drought stress. J Proteomics 5:950–960
• Inman-Bamber NG (2004) Sugarcane water stress criteria for irrigation and drying off. Field Crop Res 89:107–122
• Jangpromma N, Kitthaisong S, Komatsu S, Daduang S, Jaisil P, Thammasirirak S (2010a) A proteomics analysis of drought stress-responsive proteins as biomarker for drought-tolerant sugarcane cultivars. Am J Biochem Biotechnol 6:89–102
• Jangpromma N, Songsri P, Thammasirirak S, Jaisil P (2010b) Rapid assessment of chlorophyll content in sugarcane using a SPAD chlorophyll meter across different water stress conditions. Asian J Plant Sci 9:368–374
• Jangpromma N, Thammasirirak S, Jaisil P, Songsri P (2012) Effects of drought and recovery from drought stress on above ground and root growth, and water use efficiency in sugarcane (Saccharum officinarum L.). Aust J Crop Sci 6:1298–1304
• Jangpromma N, Saito A, Araki T, Jaisil P, Songsri P, Songsri P, Daduang S, Kawaguchi Y, Dhiravisit A, Thammasirirak S (2014) Molecular cloning and characterization in eukaryotic expression systems of a sugarcane cysteine protease inhibitor gene involved in drought tolerance. Tur J Bot 38:724–736
• Katam R, Basha SM, Vasanthaiah HN, Naik N (2007) Identification of drought tolerant groundnut genotypes employing proteomics approach. Agric Res 5:1–4
• Klubicova K, Danchenko M, Miernyk JA, Rashydov NM, Berezhna VV, Ova AP, Hajduch M (2010) Proteomics analysis of flax grown in chernobyl area suggests limited effect of contaminated environment on seed proteome. Environ Sci Technol 44:6940–6946
• Konishi H, Yamane H, Maeshima M, Komatsu S (2005) Characterization of fructose-bisphosphate aldolase regulated by gibberellin in roots of rice seedling. Plant Mol Biol 56:839–848
• Lee J, Seo KJ (2004) Post-translational modifications and their biological functions: proteomic analysis and systematic approaches. J Biochem Mol Biol 37:35–44
• Lee DG, Ahsan N, Lee SH, Lee JJ, Bahk JD, Kang KY, Lee BH (2009) Chilling stress-induced proteomic changes in rice roots. J Plant Physiol 166:1–11
• Li K, Xu C, Zhang K, Yang A, Zhang J (2007) Proteomic analysis of roots growth and metabolic changes under phosphorus deficit in maize (Zea mays L.) plants. J Proteomics 7:1501–1512
• Lu W, Tang X, Huo X, Xu R, Qi S, Huang J, Zheng C, Wu C (2012) Identification and characterization of fructose 1,6-bisphosphate aldolase genes in Arabidopsis reveal gene family with diverse responses to abiotic stresses. Gene 503:65–74
• Merewitz EB, Gianfagna T, Huang B (2011) Protein accumulation in leaves and roots associated with improved drought tolerance in creeping bentgrass expressing an ipt gene for cytokinin synthesis. J Exp Bot 62:5311–5333
• Miller DM (1985) Studies of root function in zea mays: iii. Xylem sap composition at maximum root pressure provides evidence of active transport into the xylem and a measurement of the reflection coefficient of the root. Plant Physiol Biochem 77:162–167
• Mitra J (2001) Genetics and genetic improvement of drought resistance in crop plants. Curr Sci 80:758–763
• Murata N, Takahashi S, Nishiyama Y, Allakhverdiev SI (2007) Photoinhibition of photosystem II under environmental stress. Biochim Biophys Acta 1767:414–421
• O’ Farrell PH (1975) High resolution two-dimensional electrophoresis of protein. Biol Chem 250:4007–4021
• Panter S, Thomson R, Bruxelles Gd, Laver D, Trevaskis B, Udvardi M (1999) Identification with proteomics of novel proteins associated with the peribacteroid membrane of soybean root nodules. Am Phytopath Soc 13:325–333
• Pradet A, Raymond P (1983) Adenine nucleotide ratios and adenylate energy charge in energy metabolism. J Plant Physiol 34:199–200
• Prajanban BO, Shawsuan L, Daduang S, Kommanee J, Roytrakul S, Dhiravisit A, Thammasirirak S (2012) Identification of five reptile egg whites protein using MALDI-TOF mass spectrometry and LC/MS-MS analysis. J Proteomics 75:1940–1959
• Qaisar U, Irfan M, Meqbool A, Zahoor M, Khan MY, Rashid B, Riazuddin S, Husnain T (2009) Identification, sequencing and characterization of a stress induced homologue of fructose bisphosphate aldolase from cotton. Can J Plant Sci 90:41–48
• Rabello AR, Guimarães CM, Rangel PHN, da Silva FR, Seixas D, de Souza E, Brasileiro ACM, Spehar CR, Ferreira ME, Mehta A (2008) Identification of drought-responsive genes in roots of upland rice (Oryza sativa L). BMC Genom 9:485
• Riccardi F, Gazeau P, Vienne D, Zivy M (1998) Protein changes in response to progressive water deficit in maize. Plant Physiol 117:1253–1263
• Ripley BS, Gilbert ME, Ibrahim DG, Osborne CP (2007) Drought constraints on C4 photosynthesis: stomatal and metabolic limitations in C3 and C4 subspecies of Alloteropsis semialata. J Exp Mar Biol Ecol 58:1351–1363
• Ruiz-Lozano JM, Azcon R, Gómez M (1996) Alleviation of salt stress by arbuscular-mycorrhizal Glomus species in Lactuca sativa plants. Physiol Plant 98:767–772
• Salekdeh GH, Siopongco J, Wade LJ, Ghareyazie B, Bennett J (2002) Proteomic analysis of rice leaves during drought stress and recovery. J Proteomics 2:1131–1145
• Shen S, Jing Y, Kuang T (2003) Proteomics approach to identify wound-response related proteins from rice leaf sheath. J Proteomics 3:527–535
• Smit MA, Singels A (2006) The response of sugarcane canopy development to water stress. Field Crop Res 98:91–97
• Songsri P, Vorasoot N, Jogloy S, Kesmala T, Akkasaeng C, Patanothai A, Holbrook CC (2009) Evaluation of yield and reproductive efficiency in peanut (Arachis hypogaea L.) under different available soil water. Asian J Plant Sci 8:465–473
• Sugiharto B (2004) Biochemical and molecular studies on sucrosephosphate synthase and drought inducible protein in sugarcane (Saccharum offcinarum). J Ilmu Dasar 5:62–67
• Sugiharto B, Ernawati N, Mori H, Aoki K, Yonekura-Sakakibara K, Yamaya T, Sugiyama T, Sakahibara H (2002) Identification and characterization of a gene encoding drought-inducible protein localization in the binder sheath cell of sugarcane. Plant Cell Physiol 43:350–354
• Tezara W, Mitchell VJ, Driscoll SD, Lawlor DW (1999) Water stress inhibits plant photosynthesis by decreasing coupling factor and ATP. Letters to Nature 401:114–117
• Xiao X, Yanga F, Zhanga S, Korpelainenc H, Li C (2009) Physiological and proteomic responses of two contrasting Populus cathayana populations to drought stress. Physiol Plant 136:150–168
• Xu WF, Shi WM (2006) Expression profiling of the 14-3-3 gene family in response to salt stress and potassium and iron deficiencies in young tomato (Solanum lycopersicum) roots: analysis by real-time RT-PCR. Ann Bot 98:965–974
• Yan S, Tang Z, Su W, Sun W (2005) Proteomic analysis of salt stressresponsive proteins in rice root J Proteomics 5:235–244
• Yan SP, Zhang QY, Tang ZC, Su WA, Sun WN (2006) Comparative proteomic analysis provides new insights into chilling stress responses in rice. Mol Cell Proteomics 5:484–496
• Yoshimura K, Masuda A, Kuwano M, Yokota A, Akashi K (2008) Programmed proteome response for drought avoidance/tolerance in the root of a C3 xerophyte (wild Watermelon) under water deficits. Plant Cell Physiol 49:226–242
• Zang X, Komatsu S (2007) A proteomics approach for identifying osmotic-stress-related proteins in rice. Phytochemistry 68:426–437
• Zhaoa Y, Dua H, Wanga Z, Huanga B (2011) Identification of proteins associated with water-deficit tolerance in C4 perennial grass species, Cynodondactylon 9 Cynodon transvaalensis and Cynodon dactylon. Physiol Plant 141:40–55

Identyfikatory

DOI

10.1007/s11738-015-1826-7