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2011 | 58 | 2 |

Tytuł artykułu

Chitinolytic enzymes from bacterium inhabiting human gastrointestinal tract - critical parameters of protein isolation from anaerobic culture

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
 The object of this study are chitinolytic enzymes produced by bacterium Clostridium paraputrificum J4 isolated from the gastrointestinal tract of a healthy human. In particular, we focus on the development of purification protocols, determination of properties of the enzymes and their activity profiles. The process of bacteria cultivation and isolation of chitinolytic complex of enzymes showing specific activities of endo-, exo-chitinase and N-acetyl-β-glucosaminidase was optimized. A range of various purification procedures were used such as ultrafiltration, precipitation, chromatographic separations (ion-exchange, size exclusion, chromatofocusing) in altered combinations. The optimal purification protocol comprises two or three steps. Individual samples were analyzed by SDS/PAGE electrophoresis and after renaturation their activity could be detected using zymograms. Mass spectroscopy peptide fragment analysis and MALDI analysis of the purest samples indicate presence of endochitinase B (molecular mass about 85 kDa) and of 60-kDa endo- and exochitinases.

Słowa kluczowe

Wydawca

-

Rocznik

Tom

58

Numer

2

Opis fizyczny

p.261-163,fig.,ref.

Twórcy

autor
  • Institute of Macromolecular Chemistry, Academy of Sciences of the Czech Republic, Praha, Czech Republic
autor
autor
autor
autor
autor

Bibliografia

  • Chang WT, Chen ML, Wand SL (2010) An antifungal chitinase produced by Bacillus cereus with shrimp and crab shell powder as a carbon source. J Microbiol Biotech 26: 945-950.
  • Dahiya N, Tewari R, Hoondal GH (2006) Biotechnological aspects of chitinolytic enzymes: a review. Appl Microbiol Biotechnol 71: 773-782. 
  • Flint HJ, Zhang JX, Martin J (1994) Multiplicity and expression of xylanases in the rumen cellulolytic bacterium Ruminococcus flavefaciens. Curr Microbiol 29: 139-143.
  • Fukamizo T (2000) Chitinolytic enzymes: catalysis, substrate binding, and their application. Curr Protein Pept Sci 1: 105-124.  
  • Khan A, Williams K, Molloy MP, Nevalainen H (2003) Purification and characterization of a serine protease and chitinases from Paecilomyces lilacinus and detection of chitinase activity on 2D gels. Protein Expr Purif 32: 210-220. 
  • Li H, Morimoto K, Katagiri N, Kimura T, Sakka K, Lun S, Ohmiya K (2002) A novel β-N-acetylglucosaminidase of Clostridium paraputrifcum M-21 with high activity on chitobiose. Appl Microbiol Biotechnol 60: 420-427. 
  • Morimoto K, Karita S, Kimura T, Sakka K, Ohmiya K (2001) Characterization of Clostridium paraputrificum chitinase A from a recombinant Escherichia coli. J Biosci Bioeng 92: 466-468. 
  • Morimoto K, Yoshimoto M, Karita S, Kimura T, Ohmiya K, Sakka K (2007) Characterization of the third chitinase Chi18C of Clostridium paraputrificum M-21. Appl Microbiol Biotechnol 73: 1106-1113. 
  • Šimůnek J, Kopečný J, Hodrová B, Bartoňová H (2002) Identification and characterization of Clostridium paraputrificum, a chitinolytic bacterium of human digestive tract. Folia Microbiol Praha 47: 559-564. 
  • Tishchenko G, Koppová I, Šimůnek J, Dohnálek J (2010) Extracellular complex of chitinolytic enzymes of Clostridium paraputrificum strain J4 separated by membrane ultrafiltration. Folia Microbiol Praha 55: 386-389. 
  • van Aalten DMF, Komander D, Synstad B, Gåseidnes S, Peter MG, Eijsink VGH (2001) Structural insights into the catalytic mechanism of a family 18 exo-chitinase. Proc Natl Acad Sci USA 98: 8979-8984. 
  • Vernazza CL, Gibson GR, Rastall RA (2005) In vitro fermentation of chitosan derivatives by mixed cultures of human faecal bacteria. Carbohydr Polym 60: 539-545.
  • Vicencio AG, Narain S, Du ZF, Zeng WY, Ritch J, Casadevall A, Goldman DL (2008) Pulmonary cryptococcosis induces chitinase in the rat. Respir Res 9: 40. 

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Bibliografia

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