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2010 | 19 | 2 |

Tytuł artykułu

Performance estimation of nested PCR-based assays for direct detection of Listeria monocytogenes in artificially contaminated materials

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
Our study evaluated the sensitivity and repeatability of nested PCR-based assays for directly detecting L. monocytogenes in artificially contaminated human serum, pasteurized milk and physiological saline samples. The detection of the hlyA (267bp) and iap (371bp) gene fragments was compared. The logistic regression (logit model) was used to evaluate the probability of detection of L. monocytogenes at various contamination levels and to calculate the number of test repetitions required to reach necessary detection limits (e.g. 50%, 80%, 90%, and 95%). The reliable limit of detection for both genetic markers, ensuring ≥95% probability of detection, was established at 102 CFU/100μL.

Wydawca

-

Rocznik

Tom

19

Numer

2

Opis fizyczny

p.293-299,fig.,ref.

Twórcy

autor
  • Medical University of Bialystok, A.Mickiewicza 2c, 15-222 Bialystok, Poland
autor

Bibliografia

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  • 10. HUGHES J.P., TOTTEN P. Estimating the accuracy of polymerase chain reaction-based tests using endpoint dilution. Biometrics 59, 505, 2003.
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  • 12. LOFSTROM C., KNUTSSON R., AXELSSON C.E., RADSTROM P. Rapid and specific detection of Salmonella spp. in animal feed samples by PCR after culture enrichment. Appl. Environ. Microbiol. 70, 69, 2004.
  • 13. SMIEJA M., MAHONY J.B., GOLDSMITH C.H., CHONG S., PETRICH A, CHERNESKY M. Replicate PCR testing and probit analysis for detection and quantitation of Chlamydia pneumoniae in clinical specimens. J. Clin. Microbiol. 39, 1796, 2001.
  • 14. HITCHINS A. AOAC Excel worksheet: Limit of Detection Program for Qualitative Microbiology Methods (LOD50% Spearman-Karber), version 09/11/2002, available at www.aoac.org/accreditation/DEMO.xls (2 October 2009).
  • 15. KOTZ S., BALAKRISHNAN N., READ C., VIDAKOVIC B, JOHNSON NL (Eds.). Karber Method. In Encyclopedia of Statistical Sciences, 2nd ed., John Wiley & Sons, Inc., Hoboken, New Jersey, 6, 3820, 2006.
  • 16. HERMAN L.M., De BLOCK J.H., MOERMANS R.J. Direct detection of Listeria monocytogenes in 25 milliliters of raw milk by a two-step PCR with nested primers Appl. Environ. Microbiol.; 61, 817, 1995.
  • 17. BUBERT A., RIEBE J., SCHNITZLER N., SCHONBERG A., GOEBEL W., SCHUBERT P. Isolation of catalase-negative Listeria monocytogenes strains from listeriosis patients and their rapid identification by anti-p60 antibodies and/or PCR. J. Clin. Microbiol. 35, 179, 1997.
  • 18. ANONYMOUS. Microbiology of food and animal feeding stuffs - Horizontal method for the detection and enumeration of Listeria monocytogenes - Part 1: Detection method ISO 11290-1:1996.
  • 19. JATON K., SAHLI R., BILLE J. Development of polymerase chain reaction assays for detection of Listeria monocytogenes in clinical cerebrospinal fluid samples. J. Clin. Microbiol. 30, 1931, 1992.
  • 20. SIMON M.C., GRAY D.L., COOK N. DNA extraction methods for the detection of Listeria monocytogenes in cold-smoked salmon. Appl. Environ. Microbiol. 62, 822, 1996.
  • 21. CHEN W., LI D., PAULUS B., WILSON I., CHADWICK V.S. Detection of Listeria monocytogenes by polymerase chain reaction in intestinal mucosal biopsies from patients with inflammatory bowel disease and controls. J. Gastroenterol. Hepatol. 15, 1145, 2000.
  • 22. CHIBA M., FUKUSHIMA T., INOUE S., HORIE Y., IIZUKA M., MASAMUNE O. Listeria monocytogenes in Crohn's disease. Scand. J. Gastroenterol. 33, 430, 1998.
  • 23. HEIN I., KLEIN D., LEHNER A., BUBERT A., BRANDL E., WAGNER M. Detection and quantification of the iap gene of Listeria monocytogenes and Listeria innocua by a new real-time quantitative PCR assay. Res. Microbiol. 152, 37, 2001.
  • 24. JOHNSON J., JINNEMAN K., STELMA G., SMITH B.G., LYE D., MESSER J., ULASZEK J., EVSEN L., GENDEL S., BENNETT R.W., SWAMINATHAN B., PRUCKLER J., STEIGERWALT A., KATHARIOU S., YILDIRIM S., VOLOKHOV D., RASOOLY A., CHIZHIKOV V., WIEDMANN M., FORTES E., DUVALL R.E., HITCHINS A.D. Natural atypical Listeria innocua strains with Listeria monocytogenes pathogenicity island 1 genes. Appl. Environ. Microbiol. 70, 4256, 2004.
  • 25. BICKLEY J., SHORT J.K., MCDOWELL D.G., PARKES H.C. Polymerase chain reaction (PCR) detection of Listeria monocytogenes in diluted milk and reversal of PCR inhibition caused by calcium ions. Lett. Appl. Microbiol. 22, 153, 1996.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

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