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 This paper presents a mathematical-computational toy model based on the assumed dynamic principles of prebiotic peptide evolution. Starting from a pool of amino acid monomers, the model describes in a generalized manner the generation of peptides and their sequential information. The model integrates the intrinsic and dynamic key elements of the initiation of biopolymerization, such as the relative amino acid abundances and polarities, as well as the oligomer reversibility, i.e. fragmentation and recombination, and peptide self-replication. Our modeling results suggest that the relative amino acid abundances, as indicated by Miller-Urey type electric discharge experiments, played a principal role in the early sequential information of peptide profiles. Moreover, the computed profiles display an astonishing similarity to peptide profiles observed in so-called biological common ancestors found in the following three microorganisms; E. coli, M. jannaschii, and S. cereviasiae. The prebiotic peptide fingerprint was obtained by the so-called polarity index method that was earlier reported as a tool for the identification of cationic amphipathic antibacterial short peptides.
The synthesis and antitumour and antibacterial activity of coumarin and chromone phosphorohydrazones have been reported. This study describes influence of phosphorohydrazones derivatives of coumarin and chromone on the polymerization and viscosity of fibrin. The fibrin polymerization assay was performed by the Shen and Lorand method and the clot viscosity was measured on the basis of Shen and Lorand and Marchi and coworkers methods. Among the eight compounds tested, one coumarin derivative and two chromone derivatives showed significant activity
Marine algae Gelidium, Grateloupia elliptica Holmes, and Codium fragile are employed for preparation of PANI/seaweed composites. Infrared absorption (IR), electron spin resonance (ESR) spectroscopy measurements are carried out to confirm the resultant structure. The direct use of natural biological materials for polymerisation reaction allows us to production of polymers with characteristic surface. This can be referred to as bio-interface polymerisation.
Dermatan sulfate (DS) widespread as a component of extracellular matrix proteoglycans, is characterized by great bio-reactivity and remarkable structural heterogeneity due to distinct degrees of sulfation and glucuronosyl epimerization and different polymerization degrees. However, DS metabolism under various biological conditions is poorly known. Dupuytren’s contracture is a benign fibromatosis leading to complex remodeling of the palmar fascia structure and properties. However, it remains unclear whether the disease affects the structure of DS, which is the major tissue glycosaminoglycan. Thus the aim of the study was to examine the structure of the total DS in Dupuytren’s fascia. DS chains were extracted from 5 samples of normal fascia and 7 specimens of Dupuytren’s tissue by papain digestion followed by fractionation with cetylpyridinium chloride. Then, DS structure analysis was performed comprising the evaluation of its molecular masses and sensitivity to hyaluronidase and chondroitinase B. Dupuytren’s contracture is associated with significant remodeling of DS chain structure revealed by (1) a distinct profile of chain molecular masses characterized by the appearance of long size components as well as the increase in the content of small size chains; (2) a different glucuronosyl epimerization pattern connected with the enhanced content of glucuronate disaccharide blocks; (3) chain oversulfation. These structural alterations in total DS may modify the GAG interactions especially affecting collagen fibrillogenesis and growth factor availability. Thus, Dupuytren’s contracture associated DS remodeling may promote the phenomena typical for advanced disease: apoptosis and reduction in cell number as well as the appearance of dense pseudotendinous collagen matrix
Anticoagulative effect of pepsin is observed in vitro when its concentration is 36 μM and higher. This effect is due to inhibition of fibrin monomer polimerization. Protamine abolishes anticoagulative effect of pepsin. Pepsin does not influence platelet aggregation induced by ADP and collagen.
The hepatoma Morris 5123 tumor growth is accompanied by changes in actin content and polymerization (Malicka-Błaszkiewicz et al. (1995) Mat. Med. Pol., 27, 115-118; Nowak et al. (1995) J. Exp. Cancer Res. 14, 37-40). Presently actin isoforms from cytosol and cytoskeleton fractions were separated by SDS/PAGE and identified with antibodies directed against different actin isoforms. Actin isolated from the cytosol by affinity chromatography on DNase I bound to agarose shows the presence of only one protein spot on 2D gel electrophoresis corresponding to the mobility of the rabbit α skeletal muscle actin (Mr 43000) and isoelectric point equal to 5.3. It interacts only with monoclonal anti β actin isoform antibodies, posing the question of differential affinity of actin isoforms to DNase I.
The kinetics of polymer particle formation and distribution of acrylic monomers between a solution and polymer particles at the graft polymerization of acrylic monomers onto polysaccharides have been investigated. The polyacrylic particle number increased at the first stage of polymerization of soluble monomers. At the second stage of polymerization, the number of particles was always constant. The concentration of adsorbed monomer decreased during the polymerization process. The monomer concentration in dispersed phase was higher than in solution. The mathematical model taking into account the rate of monomer polymerization, aggregation of oligomer radicals and their conformation changes, adsorption of monomer in the polymer particles has been proposed. Based on the experimental results, some constants of the process were calculated.
Phenylpropanoids are a numerous group of the secondary metabolites. The pathway of phenolic biosynthesis is induced in plants under the treatment of various unfavorable factors. Phenylpropanoid compounds act twofold: they can be toxic for plant, inhibiting their growth and development, and, on the other side, they protect plants from stress effect. In the paper the most important phenolics, their properties and influence on plant metabolism, the typical reactions and application in pharmacy were discussed. The molecular explanation of oxidation reactions, lignin polymerization, tannin condensation, UV absorbtion and decomposition and the production of reactive oxygen species were demonstrated. In plant physiology phenylpropanoid compounds are grouped into simple and composed phenylpropanoids. Simple pheylpropanoid compounds involve mainly phenolic acids and alcohols, vanilin and coumarins. Chlorogenic acid demonstrates antibiotic properties, while salicylic acid (SA) is a plant growth and development regulator, playing also a signal role in plant defence response to numerous stresses. SA initiates synthesis of PR (pathogenesis-related) proteins, hydrogen peroxide production and controls systemic acquired resistance (SAR). Phenolic alcohols polymerize to lignin, which strengths cell wall and builds natural barrier against pathogen attack. Compounds like vanilin, strong aromatic, attract insects and are used in cosmetic and food industry. Coumarins show phototoxic effect and also demonstrate a growth inhibitor action. Composed phenylpropanoids involve tannins, flavonoids and isoflavonoids. Tannins protect plants from pathogens and deter preying insects. Flavonoids are pigments of flowers and leaves, and can protect cell structures and organic compounds from cold, UV radiation and free radicals. Isoflavonoids are characterized mainly by insecticide feature. Many isoflavonoids belong to phytoalexins, specific compounds synthesized within defence mechanism against stresses. They inhibit fungal spore germination and act osmotically to penetrating hyphae. Moreover, these compounds may imitate steroid molecules joining to specific steroid receptors disturbing numerous metabolic processes. Among the best known phytoalexins pisatin, phaseolin and medicarpin are mentioned. Phenylpropanoids also play an allelopathic role secreted by roots into soil, and inhibiting germinating and growth of other plants.
Jedną z najważniejszych właściwości białek serwatkowych jest zdolność do tworzenia żeli. Na zachowanie białek w roztworze wodnym wpływa wartość pH, moc jonowa roztworu, temperatura, czas ogrzewania oraz stężenie samego białka. Celem badań było określenie wpływu metody ogrzewania, stężenia chlorku sodu i chlorku wapnia na właściwości reologiczne i strukturę polimerów izolatu białek serwatkowych. Stosowano dwie metody ogrzewania roztworów izolatu białek serwatkowych (WPI). Pojedyncze ogrzewanie prowadzono przy pH 7,0 w temp. 80°C przez 30 min., zaś podwójne najpierw przy pH 8,0, a następnie po ochłodzeniu do 21°C ustalano pH na poziomie 7,0 i ponownie ogrzewano w temp. 80°C przez 30 min. Określano właściwości reologiczne otrzymanych polimerów, a także analizowano te związki z wykorzystaniem HPLC. Ustalono, że twardość żeli rosła wraz ze wzrostem stężenia jonów metali. W przypadku dodatku chlorku sodu, najwyższy wzrost wartości modułu zachowawczego obserwowano w dyspersji o stężeniu soli 120 mM, zaś 15 mM w przypadku chlorku wapnia. W rozdziałach chromatograficznych wykazano, że dodatek soli wpływał na większy stopień spolimeryzowania białek serwatkowych.
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