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Molecular identification and phylogenetic analysis of non-cytopathic bovine viral diarrhea virus isolate obtained from a local respiratory outbreak in Northern Turkey

100%

Yazici Z., Gumusova S., Tamer C., Cagirgan A. A., Akman A., Ozan E., Kadi H., Palanci H. S., Albayrak H.

Medycyna Weterynaryjna

2017

tom 73

nr 05

In February 2016, a local respiratory disease outbreak with two fatalities was reported in Samsun, Turkey. A non-cytopathic bovine viral diarrhea virus (ncp-BVDV) was identified from the organ and leucocyte samples of dead juvenile heifers using RT-PCR with specific primers for the NS2/3 gene coding region. The NS2/3 gene of BVDV was sequenced and compared with other published sequences of BVDV. The sequences of our isolate which was named as Samsun TR, had 81-83% nucleotite (nt) identity for BVDV-1. Phylogenetic analysis revealed that Samsun-TR was closely related to LC089875 (Japan), AF526381 (China) and also shared 83% nucleotide(nt) identity with them. The NS2/3 gene sequence of Samsun-TR was deposited in the GenBank database with the accession number of KX428495.

Molecular identification and phylogeny of bovine herpesvirus-1 (BoHV-1) from cattle associated with respiratory disorders and death in Turkey

81%

Albayrak H., Tamer C., Ozan E., Muftuoglu B., Kadi H., Dogan F., Akman A., Cagirgan A. A., Elhag A. E., Kurucay H. N., Gumusova S., Yazici Z.

Medycyna Weterynaryjna

2020

tom 76

nr 06

This study aimed to investigate the presence of bovine herpesvirus 1 by molecular techniques in two cases of respiratory disease in beef cattle, reported from Amasya Province of Turkey in 2018. Nasal swab and lung tissue samples were taken. The presence of bovine herpesvirus-1 (BoHV-1) was confirmed by the PCR method using glycoprotein B (gB) gene-specific primers, and then the isolates were also subjected to partial sequencing. The results of the phylogenetic analysis revealed that the two new isolates in Turkey belonged to the same subclade as subtype 1.1 of BoHV-1, and both also had a 100% nucleotide (nt) homology with the Cooper reference strain of BoHV-1. These findings can enrich the gB sequence content data for BoHV-1 found in GenBank regarding Turkey.

Ograniczanie wyników

2 Medycyna Weterynaryjna

2 Akman A.

2 Albayrak H.

2 Cagirgan A. A.

2 Gumusova S.

2 Kadi H.

2 Ozan E.

2 Tamer C.

2 Yazici Z.

1 Dogan F.

1 Elhag A. E.

1 Kurucay H. N.

1 Muftuoglu B.

1 Palanci H. S.

1 2020

1 2017

Wyniki wyszukiwania

Molecular identification and phylogenetic analysis of non-cytopathic bovine viral diarrhea virus isolate obtained from a local respiratory outbreak in Northern Turkey

Molecular identification and phylogeny of bovine herpesvirus-1 (BoHV-1) from cattle associated with respiratory disorders and death in Turkey