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Cytochrome b is the central catalytic subunit of the quinol : cytochrome c oxidoreductase of complex III of the mitochondrial oxidative phosphorylation system and is essential to the viability of most eukaryotic cells. Partial cytochrome b gene sequences of 14 species representing mammals, birds, reptiles and amphibians are presented here including some species typical for Poland. For the analysed species a comparative analysis of the natural variation in the gene was performed. This infor­mation has been used to discuss some aspects of gene sequence — protein function relationships. Review of relevant literature indicates that similar comparisons have been made only for basic mammalian species. Moreover, there is little information about the Polish-specific species. We observed that there is a strong non-random dis­tribution of nucleotides in the cytochrome b sequence in all tested species with the highest differences at the third codon position. This is also the codon position of the strongest compositional bias. Some tested species, representing distant systematic groups, showed unique base composition differing from the others. The quail, frog, python and elk prefer C over A in the light DNA strand. Species belonging to the ar- tiodactyls stand out from the remaining ones and contain fewer pyrimidines. The ob­served overall rate of amino acid identity is about 61%. The region covering Qo cen­ter as well as histidines 82 and 96 (heme ligands) are totally conserved in all tested species. Additionally, the applied method and the sequences can also be used for di­agnostic species identification by veterinary and conservation agencies.
Basing on the polymorphism at 26 DNA microsatellite loci an estimation was made of the mean number of genes migrating in one generation (Nem) between populations of nine cattle breeds maintained in Germany, Switzerland and Poland: Angler, German Simmental, Brown Swiss, Swiss Simmental, Holstein, Eringer, Polish Red (PR – included in the National Rare Livestock Breeds Preservation Programme), Polish Black-and-White (PBW) and Polish Red-and-White (PRW). The Nem value for the whole population amounted to 2.048. When the breeds were grouped according to the country of origin the greatest flow of genes was observed within the Polish (2.023), while the lowest within the German population (1.214). The Nem values estimated when comparing each breed with each show that the greatest exchange of genetic material took place between breeds from the same geographic regions. On the phylogenetic N-J tree, constructed on the basis of genetic distance DA, the PR were classified together with PBW and PRW cattle. However, when evaluating the relations between breeds on the basis of values estimated for the DSW genetic distance, the PR cattle were classified together with the Angler breed. Bootstrap values were higher when the tree was constructed on the basis of the DA and not the DSW distance, what indicates a higher reliability of the genealogical structure determined on the basis of the former. In turn, the DSW distance gave a more precise information about the common background of the German and Swiss Simmentals, as well as about the share of the Angler breed used in the past for upgrading the PR.
On the basis of DNA microsatellite polymorphism at 26 loci tested within the European Concerted Action AIRE 2066 for the Analysis of Genetic Diversity to Preserve Future Breeding Options, a determination was made of the genetic structure of 147 Polish Red (PR) cattle, included in the National Rare Livestock Breeds Preservation Programme (NRLBPP). The examined PR cattle population was characterized by a high genetic variation (a total of 193 alleles identified, Ho = 0.695, He = 0.703,mean number of alleles per locus = 7.4). An analysis of the genetic distance (Dps), including information on the presence (or absence) in the genome of alleles specific for the breed, confirmed that 80% of PR animals included in the NRLBPP comprised a separate genetic group, differing from populations of other European cattle breeds. The results show the uniqueness of the gene pool of PR cattle included in the NRLBPP. Despite the crossing with other breeds widely applied in the past, the present PR material does, to a considerable degree, remain genetically distinct. Thus, it is anticipated that basing on the existing preserved population the reconstruction of a pure, or almost pure PR cattle can be achieved.
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