PL EN


Preferencje help
Widoczny [Schowaj] Abstrakt
Liczba wyników

Czasopismo

2012 | 68 |

Tytuł artykułu

Genetic diversity of wild Thymus capitatus (Lamiaceae) in Tunisia using molecular markers

Treść / Zawartość

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
In Tunisia, Thymus capitatus L. populations are severely destroyed due to deforestation and over-collecting. The species occurs in small scattered populations decreasing progressively in size. Yet, no conservation or improvement programs are attempted to preserve and promote the potential value of this resource. In this work, we assessed the genetic diversity of nine Tunisian populations of Thymus capitatus L. from different bioclimates, using 103 polymorphic randomly amplified polymorphic DNA (RAPD) loci. The analysis of the genetic variation within and among populations is primordial to elaborate conservation and improvement programs. The species showed a low diversity within populations (0.276

Wydawca

-

Czasopismo

Rocznik

Tom

68

Opis fizyczny

p.89-100,fig.,ref.

Twórcy

  • Laboratory of Plant Biotechnology B.P.676, National Institute of Applied Sciences and Technology,1080 Tunis Cedex, Tunisia
autor
autor

Bibliografia

  • AagaardJ.E., Krutovskii K.V., Strauss S.H. 1998. RAPDs andallozymes exhibit similar levels of diversity andd ifferentiation among populations and races of Douglas-fir. Heredity 81: 69–78.
  • Allnutt T.R., Newton A.C., Premoli A., Lara A. 2003. Genetic variation in the threatenedSouth American conifer Pilgerodendron uviferum (Cupressaceae), detected using RAPD markers. Biological Conservation 114: 245–253.
  • Bauer K.D., Garbe H., Surburg H. 1997. Common fragrance andflavor materials. Weinheim, Germany: Wiley-VCH Verlag.
  • Bel Hadj Ali I., Chograni H., Boussaid M. 2007. Variabilité des volatiles chez Thymus capitatus L. (Lamiacées) en Tunisie. Revue des Régions Arides 2: 467–473.
  • Ben El Hadj Ali I. 2010. Diversité génétique et variabilité de la composition terpénique des populations naturelles de deux espèces de thym : Thymus capitatus Hoffm. et Link. & Thymus algeriensis Boiss. et Reut. (Lamiacées) en Tunisie. Thesis, Faculté des sciences de Tunis, 204p.
  • Ben ElHadj Ali I., Zaouali Y., Bejaoui A., Boussaid M. 2010. Variation of the chemical composition of essential oils in Tunisian populations of Thymus algeriensis Boiss. ET Reut. (Lamiaceae) and implication for conservation. Chemistry and Biodiversity 7: 1276–1289.
  • Ben El Hadj Ali I., Guetat A., Boussaid M. 2012. Genetic diversity, population structure and relationships of Tunisian Thymus algeriensis Boiss. et Reut. and Thymus capitatus Hoffm. et Link. assessedby isozymes. Industrial Crops and Products 36: 149–163.
  • Bonnet E., Van De Peer Y. 2002. ZT: a software tool for simple andpartial Mantel tests. Journal of Statistic Soft 10: 1–12.
  • Boulila A., Bejaoui A., MessaoudC., BoussaidM. 2010. Genetic diversity and population structure of Teucrium polium (Lamiaceae) in Tunisia. Biochemical Genetics 48: 57–70.
  • Bounatirou S., Smiti S., Miguel M.G., Faleiro L., Rejeb M.N., Neffati M., Costa M.M., Figueiredo A.C., Barroso J.G., Pedro L.G. 2007. Chemical composition, antioxidant and antibacterial activities of the essential oils isolatedfrom Tunisian Thymus capitatus Hoff. et Link. FoodChemistry 105: 146–155.
  • Bouraoui O. 2000. La médicine traditionnelle dans le gouvernera de Sousse. Phd thesis, The University of Medcine of Sousse. Tunisia.
  • Castro-Félix P., De La Rosa J.A.P., Amado G.V., Maganã S.V., Santerre A., Toral F.L.D., Villalobos-Arámbula A.R. 2008. Genetic relationships among Mexican white pines (Pinus, Pinaceae) basedon RAPD markers. Biochemecal, Systematics and Ecology 36: 523–530.
  • Dagnelie P. 1975. Analyse statistique à plusieurs variables. Presses Agronomiques, Gembloux.
  • Dittbrenner A., Hensen I., Wesche K. 2005. Genetic structure andrand om amplifiedpolymorphic DNA diversity of the rapidly declining Angelica palustris (Apiaceae) in eastern Germany in relation to population size andseedprod uction. Plant Species Biology 20: 191–200.
  • Ehlers B.K., Thompson J.D. 2004. Do co-occurring plant species adapt to one another? The response of Bromus erectus to the presence of different Thymus vulgaris chemotypes. Oecologia 141: 511–518.
  • EllstrandN.C., Elam D.R. 1993. Population genetic consequences of small population size: implications for plant conservation. Annual Review of Ecology and Systematics 24: 217–242.
  • Emberger L. 1966. Une classification biogéographique des climats. Recherches et Travaux des Laboratoires de Géologie, Botanique et Zoologie, University of Sciences Montpellier 7: 1–43.
  • Excoffier L., Smouse P.E., Quattro J.M. 1992. Analysis of molecular variance inferredfrom metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131: 479–491.
  • Figueiredo A.C., Barroso J.G., Pedro L.G., Salgueiro L., Miguel M.G., Faleiro M.L. 2008. Portuguese Thymbra and Thymus Species Volatiles: Chemical Composition andBiological Activities. Curium Pharmaceutical Design 14: 3120–3140.
  • Hampl V., Pavlcek A., Flegr J. 2001. Construction and bootstrap analysis of DNA ?ngerprinting-based phylogenetic trees with the freeware program FreeTree: application to trichomonadparasites. International Journal of Systematic, Evolution and Microbiology 51: 731–735.
  • Hamrick J.L., Godt M.J.W. 1996. Effects of life history traits on genetic diversity in plant species. Philo Trans Roy Soc London B 35:1291–1298.
  • Hazzit M., Baaliouamer A., Veríssimo A.R., Faleiro M.L., Miguel M.G. 2009. Chemical composition and biological activities of Algerian Thymus oils. Food Chemistry 116: 714–721.
  • Hedhili L., Romdhane M., Planche H., Abderrabba M. 2005. Towards gas chromatography–mass spectrometry coupling protocols for both identifying and quantification essential oils of Thymus capitatus Hoff et Link. Journal of Chromatography A 1064:129–134.
  • Hovmalm H.A.P., Jeppsson N., Bartish I.V., Nybom H. 2004. RAPD analysis of diploid and tetraploid populations of Aronia points to different reproductive strategies within the genus. Hereditas 141: 301–312.
  • Kremer A., Caron H., Cavers S., Colpaert N., Gheysen G., Gribel R., Lemes M., Lowe A.J., Margis R., Navarro C., Salgueiro F. 2005. Monitoring genetic diversity in tropical trees with multilocus dominant markers. Heredity 95: 274–280.
  • Le Floc’h E. 1983. Contribution à une étude ethnobotanique de la flore tunisienne. Imp.Off. Rep. Tunisia.
  • Lodhi M.A., Ye G.N., Weeden N.F. 1994. A simple andefficient methodfor DNA extraction from grapevine cultivars and Vitis species. Plant Molecular Biology Reporter 12: 6–13.
  • López-Pujol J., Bosch M., Simon J., Blanché C. 2004. Allozyme Diversity in the TetraploidEnd emic Thymus loscosii (Lamiaceae). Annals of Botany 93: 323–332.
  • Mabberley D.J. 1997. The plant-book. Cambridge: Cambridge University Press
  • Mantel N. 1967. The detection of disease clustering and a generalized regression approach. Cancer Research 27:209–220.
  • Mártonfi P., Mártonfiová L. 1996. Thymus chromosome numbers from Carpathians andPannonia. Thaiszia Journal of Botany 6:25–38.
  • Monteleone I., Ferrazzini D., Belletti P. 2006. Effectiveness of Neutral RAPD Markers to Detect Genetic Divergence between the Subspecies uncinata and mugo of Pinus mugo Turra. Silva Fennica 40: 391–406.
  • Morales R. 1996. Studies on the genus Thymus L. Lamiales Newsletters 4: 6–8.
  • Nabli M.A. 1995. Essai de synthèse sur la végétation et la phyto-écologie tunisiennes II et III: le milieu physique et la végétation. Ecologie végétale appliquée (I.O.R.) Tunisie.
  • Nei M., Li W.H. 1979. Mathematical model for studying genetic variation in terms of restriction endonucleases. Proceedings of the National Academy of Sciences of the United States of America 76:5269–5273.
  • Nybom H., Bartish I.V. 2000. Effects of life history traits andsampling strategies on genetic diversity estimates obtainedwith RAPD markers in plants. Perspectives in Plant Ecology, Evolution andSystematics 3: 93–114.
  • Nybom H. 2004. Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plant. Molecular Ecology 13: 1143–1155.
  • Petanidou T., Vokou D. 1993. Pollination ecology of Labiatae in a phryganic (East Mediterranean) ecosystem. American Journal of Botany 80: 892–899.
  • Pérez-García F.M., Hornero J., González-Benito E. 2003. Interpopulation variation in seedgermination of five Mediterranean Labiatae shrubby species. Israel Journal of Plant Science 51: 117–124.
  • Pottier-Alapetite G. 1981. Flore de la Tunisie Angiospermes Dicotylédones Gamopétales, pp. 809–811.
  • Rohlf F.J. 1998. NTSYSpc Version 2.0. User Guide. Applied Biostatistics Inc.
  • Saitou N., Nei M. 1987. The neighbour-joining method: a new method for reconstructing phylogenetic trees. Molecular Biology andEvolution 4: 406–425.
  • Sas (statistical analysis system) 1990. SAS user’s guide: SAS STAT, SAS BASIC. Version 6 fourth edition. SAS incl, Box 8000. Cary, NC 27512-8000, Cary: NC: SAS Institut Inc.
  • Solouki M., Mehdikhani H., Zeinali H., Emamjomeh A.A. 2008. Study of genetic diversity in Chamomile (Matricaria chamomilla) basedon morphological traits andmolecular markers. Scientia Horticulturae 117: 281–287.
  • Stahl-Biskup E., Sáez F. 2002. Thyme – The Genus Thymus. Medicinal and Aromatic Plants-Industrial profiles. Taylor andFrancis, London, New York, pp. 75–124.
  • Thompson J.D. 1999. Population differentiation in Mediterranean plants: insights into colonization history andthe evolution andconservation of endemic species. Heredity 82: 229–236.
  • Thompson J.D. 2002. Population structure andthe spatial dynamics of genetic polymorphism in thyme. in Stahl-Biskup, E., Saez, F., (Eds.),
  • Thyme: the Genus Thymus, London: Taylor and Francis. pp. 44–74.
  • Verma S., Karihaloo J.L., Tiwari S.K., Magotra R., Koul A.K. 2007. Genetic diversity in Eremostachys superba Royle ex Benth. (Lamiaceae), an endangered Himalayan species, as assessedby RAPD. Genetic Resources andCrop Evolution 54: 221–229.
  • Volis S., Yakubov B., Shulgina I., Ward D., Mendlinger S. 2005. Distinguishing adaptive from nonadaptive genetic differentiation: comparison of QST and FST at two spatial scales. Heredity 95: 466–475.
  • Williams J.G.K., Hanafey M.K., Rafalski J.A., Tinjey S.V. 1993. Genetic analysis using random amplified polymorphic DNA markers. Methods Enzymology 218: 704–740.
  • Wright S. 1951. The genetical structure of populations. Annals Eugenics 15: 323–354.
  • Yeh F., Yang R., Boyle T. 1999. Popgene, version 1.31. Microsoft window-based freeware for population genetic analysis. University of Alberta, Edmonton.
  • Zheng W.,WangL., Meng L., Liu J. 2008. Genetic variation in the endangered Anisodus tanguticus (Solanaceae), an alpine perennial endemic to the Qinghai-Tibetan Plateau. Genetica 132: 123–129.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

bwmeta1.element.agro-fdf39717-0d59-4990-b321-934b43518001
JavaScript jest wyłączony w Twojej przeglądarce internetowej. Włącz go, a następnie odśwież stronę, aby móc w pełni z niej korzystać.