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2010 | 54 | 4 |

Tytuł artykułu

Microsatellite polymorphisms in the ovine prion protein gene in relation to PRP genotypes

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
The aims of the study were to detect the polymorphisms of three microsatellite sites: S11, S15, and S24 in the ovine PRNP and to asses their relationship with prion protein (PrP) genotypes in three sheep breeds. To identify 15 PrP genotypes based on polymorphisms at codons 136, 154, and 171, PCR-RFLP analyses were applied. The microsatellite sites were amplified. For each microsatellite two or three alleles per site in homo- and heterozygotic combinations were observed. In the group of scrapie resistant sheep (NSP1), the genotype 152/152 bp of the S11 microsatellite, 179/179 bp of S15, and 144/144 bp of S24 occurred with the highest frequencies. The results of Fisher's exact test showed that associations between PrP genotypes and microsatellite alleles and genotypes in the PRNP were statistically significant (P<0,001). In conclusion, the investigated microsatellite sites may be used as additional genetic markers in prion protein gene variability studies in sheep.

Wydawca

-

Rocznik

Tom

54

Numer

4

Opis fizyczny

p.705-711,ref.

Twórcy

  • Department of Genetics and General Animal Breeding, University of Technology and Life Sciences in Bydgoszcz, 85-084 Bydgoszcz, Poland

Bibliografia

  • 1. Acín C., Martín-Burriel I., Goldmann W., Lyahyai J., Monzón M., Bolea R., Smith A., Rodellar C., Badiola J.J., Zaragoza P.: Prion protein gene polymorphisms in healthy and scrapie-affected Spanish sheep. J Gen Virol 2004, 85, 2103-2110.
  • 2. DEFRA: National Scrapie Plan for Great Britain. Scheme Brochure. Department for Environment, Food and Rural Affairs, London, 2006, pp. 1-28.
  • 3. EC: 2003/100/EC Commission Decision of 13 February 2003 laying down minimum requirements for the establishment of breeding programmes for resistance to transmissible spongiform encephalopathies in sheep. Off J L 2003, 041, 0041-0045.
  • 4. Excoffier L., Lischer H.E.L.: Arlequin suite ver. 3.5: a new series of programs to perform population genetics analyses under Linux and Windows. Mol Ecol Resour 2010, 10, 564-567.
  • 5. Glaubitz J.C.: CONVERT: A user-friendly program to reformat diploid genotypie data for commonly used population genetic software packages. Mol Ecol Notes 2004, 4, 309-310.
  • 6. Geldermann H., Preuss S., Eckert J., Han Y., Ollesch K.: Analysis of polymorphic microsatellites within the bovine and ovine prion protein (PRNP) genes. Anim Genet 2003, 34, 283-289.
  • 7. Geldermann H., Bartenschlager H., Preuss S., Melchinger-Wild E., Herzog K., Zerr I.: Polymorphic microsatellite sites in the PRNP region point to excess of homozygotes in Creutzfeldt-Jakob disease patients. Gene 2006, 382, 66-70.
  • 8. Goldmann W., Baylis M., Chihota C., Stevenson E., Hunter N.: Frequencies of PrP gene haplotypes in British sheep flocks and the implications for breeding programmes. J Appl Microbiol 2005, 98, 1294-1302.
  • 9. Hunter N., Foster J. D., Goldman W., Stear M. J., Hope J., Bostock C.: Natural scrapie in a closed flock of Cheviot sheep occurs only in specific PrP genotypes. Arch Virol 1996, 141, 809-824.
  • 10. Lühken G., Lipsky S., Peter C., Erhardt G.: Prion protein polymorphisms in autochthonous European sheep breeds in respect to scrapie eradication in affected flocks. Small Rumin Res 2008, 75, 43-47.
  • 11. Niżnikowski R., Lühken G., Strzelec E., Lipsky S., Popielarczyk D., Erhardt G., ECONOGENE Consortium: PRNP gene polymorphism in 136, 154 and 171 codons in Polish sheep breeds. Medycyna Wet 2006, 62, 938-941.
  • 12. Preuss S., Peischl T., Melchinger E., Geldermann H.: Numerous polymorphic microsatellites in the human prion gene complex (including PRNP, PRND and PRNT). Gene 2004, 329, 197-203.
  • 13. Preuss S., Kuss A.W., He H., Bartenschlager H., Geldermann H.: Analysis of polymorphic PRNP microsatellite and ORF sites in German sheep breeds. J Anim Breed Genet 2005, 122 (Suppl. 1), 64-70.
  • 14. Rejduch B., Knapik J., Piestrzyńska-Kajtoch A., Kozubska-Sobocińska A., Krupiński J.: Frequency of genotypes in the PrP prion protein gene locus in the Polish sheep population. Acta Vet Hung 2009, 57, 39-49.
  • 15. SAS Institute Inc.: SAS/STAT; 9.2 User's Guide. Cary, NC: SAS Institute Inc, 2008.
  • 16. Wiśniewska E., Lühken G., Mroczkowski S., Erhardt G.: Prion protein (PrP) gene polymorphisms and breeding for resistance to scrapie in Polish Merino sheep. Arch Tierz 2006, 49, Special Issue, 365-371.
  • 17. Wiśniewska E., Mroczkowski S.: Different breeding strategies for scrapie resistance depending on breed- specific PrP allele and genotype frequencies in the Polish sheep. Züchtungskunde 2009, 81, 180-189.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

bwmeta1.element.dl-catalog-5603615b-948e-4cca-8b4e-96a336ee240c
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