Genome instability in fruit body derived lines generated from fruiting pfle somatic hybrid lines and development of hybrid strain specific SCAR marker in edible mushroom
Division of Plant Biology, Bose Institute, P-1/12, CIT Scheme VII M, Kolkata 700 054, India
Bibliografia
Alam N., Shim M.J., Lee M.W., Shin P.G., Yoo Y.B., Lee T.S. 2009. Phylogenetic relationship in different commercial strains of Pleurotus nebrodensis based on ITS sequence and RAPD. Mycobiology 37(3): 183-188.
Bornet B., Branchard M. 2001. Nonanchored inter simple sequence repeat (ISSR) markers: reproducible and specific tools for genome fingerprinting. Plant Mo-lecular Biology Reporter 19: 209-215.
Chakraborty U., Sikdar S.R. 2008. Production and charac-terization of somatic hybrids raised through proto-plast fusion between edible mushroom strains Volva-riella volvacea and Pleurotus florida. World Journal of Microbiology and Biotechnology 24: 1481-1492.
Chakraborty U., Sikdar S.R. 2010. Intergeneric proto-plast fusion between Calocybe indica (milky mush-room) and Pleurotus florida aids in the qualitative and quantitative improvement of sporophore of the milky mushroom. World Journal of Microbiology and Biotechnology 26: 213-225.
Dellaporta S.L., Wood J., Hicks J.B. 1983. A plant DNA mini-preparation, Version II. Plant Molecular Biol-ogy Reporter 1: 19-22. DOI: 10.1007/BF02712670.
Fang D.Q., Roose M.L. 1997. Identification of closely re-lated citrus cultivars with inter-simple sequence re-peat markers. Theoretical and Applied Genetics 95: 408-417.
Hemandez P., Martin A., Dorado G. 1999. Development of SCARs by direct sequencing of RAPD products: a practical tool for the introgression and marker as-sisted selection of wheat. Molecular Breeding 5: 245-253.
Jaccard P. 1901. Étude comparative de la distribution flo-rale dans une portion des Alpes et des Jura. Bulletin del la Société Vandoise des Sciences Naturelles 37: 547-579. DOI: 10.5169/seals-266450. (in French)
Larkin P.J., Scowcroft W.R. 1981. Somaclonal variation – a novel source of variability from cell cultures for plant improvement. Theoretical and Applied Ge-netics 60(4): 197-214.
Lee C.Y., Park J.E., Lee J., Kim J.K., Ro H.S. 2012. De-velopment of new strains and related SCAR mark-ers for an edible mushroom Hypsizygus marmo-reus. FEMS Microbiology Letters 327: 54-59.
Leroy X.J., Leon K., Branchard M. 2000. Plant genomic instability detected by microsatellite primers. Jour-nal of Biotechnology 3(2): 140-148.
Liang Z.R., Chang S.T. 1989. A study on intergeneric hy-bridization between Pleurotus sajor-caju and Schizophyllum commune by protoplast fusion. Mushroom Science 12: 125-137.
Maji P.K., Sen I.K., Behera B., Maiti T.K., Mallick P., Sikdar S.R., Islam S.S. 2012. Structural characteri-zation and study of immunoenhancing properties of a glucan isolated from a hybrid mushroom of Pleu-rotus florida and Lentinula edodes. Carbohydrate Research 358: 110:115.
Mallick P., Sikdar S.R. 2014. Production and molecular characterization of somatic hybrids between Pleuro-tus florida and Lentinula edodes. World Journal of Microbiology and Biotechnology 30(8): 2283-2293.
Mallick P., Sikdar S.R. 2015a. Fruit body production and characterization of hybrid edible mushroom strains developed by protoplast fusion between Pleurotus florida and Lentinus squarrosulus. International Jour-nal of Pharma and Bio Sciences 6(3): (B)301-314.
Mallick P., Sikdar S.R. 2015b. Restriction fragment length polymorphism and sequence analysis of rRNA-ITS region of somatic hybrids produced between Pleuro-tus florida and Lentinula edodes. Annals of Microbi-ology: DOI: 10.1007/s13213-015-1121-2.
Mignouna H.D., Mank P.A., Ellis T.H.N., van den Bosch N., Asiedu R., Ng S.Y.C., Peleman J. 2002. A genetic linkage map of Guinea yam (Dioscorea rotundata Poir) based on AFLP markers. Theoreti-cal and Applied Genetics 105: 716-725.
Nagaoka T., Ogihara Y. 1997. Applicability of inter-sim-ple sequence repeat polymorphism in wheat for use as DNA markers in comparison to RFLP and RAPD markers. Theoretical and Applied Genetics 94: 597-602.
Ogawa K., Brown A.J., Wood T.M. 1988. Intraspecific hybridization of Trichoderma reesei QM9414 by protoplast fusion using colour mutants. Enzyme and Microbial Technology 9: 229-232.
Ohmasa M. 1986. Intraspecific protoplast fusion of Pleu-rotus ostreatus using auxotrophic mutants. Japa-nese Journal of Breeding 36: 429-433.
Oskiera M., Szczech M., Bartoszewski G. 2015. Molecu-lar identification of Trichoderma strains collected to develop plant growth-promoting and biocontrol agents. Journal of Horticultural Research 23(1): 75-86. DOI: 10.2478/johr-2015-0010.
Peberdy J.F., Fox H.M. 1993. Protoplast technology and edible mushrooms. In: Chang S.T., Buswell J.A., Miles P.G. (Ed.), Genetics and breeding of edible mushrooms. Gordon and Breach Science Publish-ers, Philadelphia, pp. 125-155.
Prevost A., Wilkinson M.J. 1999. A new system of com-paring PCR primers applied to ISSR fingerprinting of potato cultivars. Theoretical and Applied Genet-ics 98: 107-112.
Shen J., Ding X., Liu D., Ding G., He J., Li X., Tang F., Chu B. 2006. Inter simple sequence repeats (ISSR) molec-ular fingerprinting markers for authenticating popula-tions of Dendrobium officinale Kimura et Migo. Bio-logical and Pharmaceutical Bulletin 29: 420-422.
Su H., Wang L., Ge Y., Feng E., Sun J., Liu L. 2008. De-velopment of strain-specific SCAR markers for au-thentication of Ganoderma lucidum. World Journal of Microbiology and Biotechnology 24: 1223-1226.
Tanaka A., Miyazaki K., Murakami H., Shiraishi S. 2004. Sequence characterized amplified region markers tightly linked to the mating factors of Lentinula edodes. Genome 47: 156-162.
Truco M.J., Hu J., Sadowski J., Quiros C.F. 1996. Inter and intra-genomic homology of the Brassica ge-nomes: implications for their origin and evolution. Theoretical and Applied Genetics 93: 1225-1233.
Wang X., Wu R., Lin X., Bai Y., Song C., Yu X., Xu C., Zhao N., Dong Y., Liu B. 2013. Tissue culture in-duced genetic and epigenetic alterations in rice pure-lines, F1 hybrids and polyploids. BMC Plant Biology 13: 77.
Weber J., Diez J., Selosse M.A., Tagu D., Le T.F. 2002. SCAR markers to detect mycorrhizas of an Ameri-can Laccaria bicolour strain inoculated in European Douglas-fir plantations. Mycorrhiza 12: 19-27.
Weir B.S. 1996. Genetic data analysis II: Methods for discrete population genetic data. Sinauer Associ-ates, Inc, Sunderland, Massachusetts.
Witte V., Grossmann B., Emeis C.C. 1989. Molecular probes for the detection of Kluyveromyces marxi-anus chromosomal DNA in electrophoretic karyo-types of intergeneric protoplast fusion products. Archives of Microbiology 152: 441-446.
Yoo Y.B., Kong W.S, Oh S.J., Jhune C.H., Shin P.G., Kim B.G., Kim G.H., Park M., Min B.R. 2004. Fruiting body development and genetic analysis of somatic hybrids by protoplast fusion in edible fungi. Journal of Mushroom Science and Produc-tion 2: 115-126.
Yu X., Li X., Zhao X., Jiang L., Miao G., Pang J., Qi X., Liu B. 2011. Tissue culture induced genomic alter-ation in maize (Zea mays) inbreed lines and F1 hy-brids. DOI: 10.1111/j.1744-7348.2011.00458.x.
Zhang R.Y., Hu D.D., Gu J.G., Hu Q.X., Zuo X.M., Wang H.X. 2012. Development of SSR markers for typing cultivars in the mushroom Auricularia auric-ula-judae. Mycological Progress 11(2): 587-592.
Zietkiewicz E., Rafalski A., Labuda D. 1994. Genome fingerprinting by simple sequence repeat (SSR) an-chored polymerase chain reaction amplification. Genomics 20: 176-183.