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Tytuł artykułu

Aspergillus penicillioides Speg. implicated in keratomycosis

Warianty tytułu
Języki publikacji
EN
Abstrakty
EN
The aim of the study was mycological examination of ulcerated corneal tissues from an ophthalmic patient. Tissue fragments were analyzed on potato-glucose agar (PDA) and maltose (MA) (Difco) media using standard laboratory techniques. Cultures were identified using classical and molecular methods. Macro- and microscopic colony morphology was characteristic of fungi from the genus Aspergillus (restricted growth series), most probably Aspergillus penicillioides Speg. Molecular analysis of the following rDNA regions: ITS1, ITS2, 5.8S, 28S rDNA, LSU and β-tubulin were carried out for the isolates studied. A high level of similarity was found between sequences from certain rDNA regions, i.e. ITS1-5.8S-ITS2 and LSU, what confirmed the classification of the isolates to the species A. penicillioides. The classification of our isolates to A. penicillioides species was confirmed also by the phylogenetic analysis.
Wydawca
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Rocznik
Tom
67
Numer
4
Opis fizyczny
p.407-416,fig.,ref.
Twórcy
  • Department of Diagnostics and Microsurgery of Glaucoma, Medical University of Lublin, Lublin, Poland
  • Department of Plant Pathology and Mycology, University of Life Sciences in Lublin, Lublin, Poland
  • Department of Plant Pathology and Mycology, University of Life Sciences in Lublin, Lublin, Poland
Bibliografia
  • Agrios GN. 2005. Plant Pathology Fifth Edition. Amsterdam (Netherlands): Elsevier Academic Press 922 p.
  • Bayman P, JL Baker, Doster MA, Michailides TJ, Mahoney NE. 2002. Ochratoxin production by the Aspergillus ochraceus group and Aspergillus alliaceus. Appl Environ Microbiol. 68(5):2326–2329.
  • Vanden Bossche H, Mackenzie DWR, Cauwenbergh G. 1988. Aspergillus and aspergillosis. New York (USA): Plenum Press.
  • Chowdhury A, Singh K. 2005. Spectrum of fungal keratitis in North India. Cornea. 24:8–15.
  • Doyle JJ, Doyle JL. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull. 19:11–15.
  • Ejdys E. 2007. Fungi isolated in school buildings. Acta Mycol. 42(2): 245–254.
  • FAO. 2006. Handbook of mycological methods. Project GCP/INT/743/CFC [Internet]. Rome (Italy): Food and Agriculture Organization of the United Nations; [cited 7 Jul 2016]. Available from: http://www.fao.org/fileadmin/user_upload/agns/pdf/coffee/Annex-F.2.pdf
  • Gallo F. 1993. Aerobiological research and problems in libraries. Aerobiologia 9:117–130.
  • Glass NL, Donaldson GC. 1995. Development of primer sets designed for use with the PCR to amplify conserved genes from filamentous Ascomycetes. Appl Environ Microb. 61:1323–1330.
  • Gock MA, Hocking AD, Pitt JI, Poulos PG. 2003. Influence of temperature, water activity and pH on growth of some xerophilic fungi. Int J Food Microbiol. 81(1):11–19.
  • Gunawardena SA, Ranasinghe KP, Arseculeratne SN, Seimon CR, Ajello L. 1994. Survey of mycotic and bacterial keratitis in Sri Lanca. Mycopathologia. 127:77–81.
  • Gupta S, Radhakrishnan A, Raharja-Liu P, Lin G, Steinmetz LM, Gagneur J, Shina H. 2015. Temporal expression profiling identifies pathways mediating effect of causal variant on phenotype. PLoS Gent. 11(6):e1005195.
  • Hamilos DL. 2010. Allergic fungal rhinitis and rhinosinusitis. Proc Am Thorac Soc. 7:245–252.
  • Kirk PM, Cannon PF, Minter DW, Stalpers JA. 2008. Ainsworth and Bisby’s dictionary of the fungi. Wallingford (UK): CAB International 771 p.
  • Krijgsheld P, Bleichrodt R, van Veluw GJ, Wang F, Müller WH, Dijksterhuis J, Wösten HAB. 2013. Development in Aspergillus. Stud Mycol. 74(1):1–29.
  • Kuba K. 2008. Molecular and immunological methods applied in diagnosis of mycoses. Wiad Parazytol. 54(3):187–197.
  • Kumar S, Stecher G, Tamura K. 2016. MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets. Mol Biol Evol. 33:1870–1874.
  • Lugauskas A, Krikštaponis A, Šveistyle L. 2004. Airborne fungi in industrial environments – potential agents of respiratory diseases. Ann Agric Environ Med. 11:19–25.
  • Machowicz-Matejko E, Zalewska ED. 2015. Pharmacological substances in vitro in limiting growth and development of fungi Colletotrichum genera. J Ocul Pharmacol and Ther. 31(5): 303–309.
  • Mendiratta DK, Thamke D, Shukla AK, Narang P. 2005. Keratitis due to Colletotrichum dematium – A case report. Indian J Med Microbiol [Internet]. [cited 7 Jul 2016]; 23:56–58. Available from: http://www.ijmm.org/text.asp?2005/23/1/56/13876
  • Mitani A, Shiraishi A, Uno T, Miyamoto H, Hara Y, Yamaguchi M, Ohashi Y. 2009. In vivo and in vitro investigations of fungal keratitis caused by Colletotrichum gloeosporioides. J Ocul Pharmacol Ther. 25:563–565.
  • Morgulis A, Coulouris G, Raytselis Y, Madden TL, Agarwala R, Schäffer AA. 2008. Database indexing for production MegaBLAST searches. Bioinformatics. 15:1757–1764.
  • Nayak N. 2008. Fungal infections of the eye – laboratory diagnosis and treatment. Nepal Med Coll J. 10(1):48–63.
  • Ogar A, Tylko G, Turnau K. 2015. Antifungal properties of silver nanoparticles against indoor mould growth. Sci Total Environ. 521–522:305–314.
  • Peterson SW. 2000. Phylogenetic relationships in Aspergillus based on rDNA sequence analysis. In: Samson RA, Pitt JI, editors. Integration of Modern Taxonomic Methods for Penicillium and Aspergillus Classification. Amsterdam (Netherlands): Harwood Acad. Publ. 323–355 p.
  • Peterson SW. 2000. Phylogenetic analysis of Penicillium species based on ITS and LSU-rDNA nucleotide sequences. In: Samson RA, Pitt JI, editors. Integration of Modern Taxonomic Methods for Penicillium and Aspergillus Classification. Amsterdam (Netherlands): Harwood Acad. Publ. 163–178 p.
  • Puerta F, Flores JM, Ruiz JA, Ruz JM, Campano F. 1999. Fungal diseases of the honeybee (Apis mellifera L.). In: Colin ME, Ball BV, Kilani M, editors. Bee disease diagnosis. Zaragoza (Spain): CIHEAM (Options Méditerranéennes: Série B. Etudes et Recherché; n. 25) 61–68 p. Available from: http://om.ciheam.org/om/pdf/b25/99600236.pdf
  • Pusz W, Kita W, Weber R. 2014. Microhabitat influences the occurrence of airborne fungi in copper mine in Poland. J Cave Karst Stud. 76(1):14–19.
  • Quaedvlieg W, Verkley GJM, Shin H-D, Barreto RW, Alfenas AC, Swart WJ, Groenewald JZ, Crous PW. 2013. Sizing up Septoria. Stud Mycol. 75:307–390.
  • Samson RA, Yilmaz N, Houbraken J, Spierenburg H, Seifert KA, Peterson SW, Varga J, Frisvad JC. 2011. Phylogeny and nomenclature of the genus Talaromyces and taxa accommodated in Penicillium subgenus Biverticillium. Stud Mycol. 70:159–183.
  • Sandhu GS, Kline B, Stockman L, Roberts G. 1995. Molecular probes for diagnosis of fungal infections. J Clin Microbiol. 33: 2913–2919.
  • Seyedmousavi S, Guillot J, Arné P, de Hoog GS, Mouton JW, Melchers WJ, Verweij PE. 2015. Aspergillus and aspergilloses in wild and domestic animals: a global health concern with parallels to human disease. Medicinal Mycol. 53:765–797.
  • Sharma S, Srinivasan M, George C. 1993. The current status of Fusarium species in mycotic keratitis in South India. Indian J Med Microbiol. 11:140–147.
  • Sklenář F, Jurjević Ž, Zalar P, Frisvad JC, Visagie CM, Kolařík M, Houbraken J, Chen AJ, Yilmaz N, Seifert KA, Coton M, et al. 2017. Phylogeny of xerophilic aspergilli (subgenus Aspergillus) and taxonomic revision of section Restricti. Stud Mycol. 88:161–236.
  • Skouboe P, Frisvad JC, Taylor JW, Lauritsen D, Boysen M, Rossen L. 1999. Phylogenetic analysis of nucleotide sequences from the ITS region of terverticillate Penicillium species. Mycol Res. 103(7): 873–881.
  • Spegazzini C. 1896. Hongos de la Caña de Azúcar. Revista de la Facultad de Agronomía Universidade Nacional de La Plata. 2(19): 227–258.
  • Tamura M, Kawahara K, Sugiyama J. 2000. Molecular phylogeny of Aspergillus and associated teleomorphs in the Trichocomaceae. In: Samson RA, Pitt JI, editors. Integration of Modern Taxonomic Methods for Penicillium and Aspergillus Classification. Amsterdam (Netherlands): Harwood Acad. Publ. 369 p.
  • Tamura K, Nei M. 1993. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol. 10:512–526.
  • Thom Ch, Raper KB. 1945. A manual of the Aspergilli. Baltimore (USA): The Williams & Wilkins Company.
  • Thomas PA. 2003. Current perspectives on ophthalmic mycoses. Clin Microbiol Rev. 16(4):730–797.
  • Walicka-Szyszko K, Sands D. 2015. The clinical presentations of pulmonary aspergillosis in children with cystic fibrosis-preliminary report. Dev. Period Med. 19(1):66–79.
  • White TJ, Bruns T, Lee S, Taylor JW. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ, editors. PCR Protocols: a guide to methods and applications. New York (USA): Academic Press Inc. 315–322 p.
  • Verkley GJM, Quaedvlieg W, Shin HD, Crous PW. 2013. A new approach to species delimitation in Septoria. Stud Mycol. 75:213–305.
  • Vilgalys R, Hester M. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J Bacteriol. 172:4239–4246.
  • Visagie CM, Hirooko Y, Tanney JB, Whitfield E, Mwange K, Meijer M, Amend AS, Seifert KA, Samson RA. 2014. Aspergillus, Penicillium and Talaromyces isolated from house dust samples collected around the world. Stud Mycol 78:63–139.
  • Zhang Z, Schwartz S, Wagner L, Miller W. 2000. A greedy algorithm for aligning DNA sequences. J Comput Biol. 7(1–2):203–214.
Typ dokumentu
Bibliografia
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Identyfikator YADDA
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