Phylogenetic relationships and time-calibration of the South American fossil and extant species of southern beeches (Nothofagus)

• Autorzy: Vento B. , Agrain F.A.
• Języki publikacji: EN

Abstrakty

EN

The genus Nothofagus is considered as one of the most interesting plant genera, not only for the living species but also due to the fossil evidence distributed throughout the Southern Hemisphere. Early publications postulated a close relationship between fossil and living species of Nothofagus. However, the intrageneric phylogenetic relationships are not yet fully explored. This work assesses the placement of fossil representatives of genus Nothofagus, using different search strategies (Equal Weight and Implied Weight), and it analyses relationships with the extant species from South America (Argentina and Chile). The relationships of fossil taxa with the monophyletic subgenera Brassospora, Fuscospora, Lophozonia, and Nothofagus and the monophyly of the clades corresponding to the four subgenera are tested. A timecalibrated tree is generated in an approach aiming at estimating the divergence times of all the major lineages. The results support the inclusion of most fossil taxa from South America into the subgenera of Nothofagus. The strict consensus tree shows the following species as closely related: Nothofagus elongata + N. alpina; N. variabilis + N. pumilio; N. suberruginea + N. alessandri; N. serrulata + N. dombeyi, and N. crenulata + N. betuloides. The species N. simplicidens shares a common ancestor with N. pumilio, N. crenulata, and N. betuloides. This contribution is one of the first attempts to integrate fossil and extant Nothofagus species from South America into a phylogenetic analysis and an approach for a time-calibrated tree.

• Wydawca: -
• Czasopismo: Acta Palaeontologica Polonica
• Rocznik: 2018
• Tom: 63
• Numer: 4
• Opis fizyczny: p.815-825,fig.,ref.

Twórcy

autor

Vento B.

• Instituto Argentino de Nivologia, Glaciologia y Ciencias Ambientales, IANIGLA, CCT-CONICET, Adrian Ruiz Leal s/n, Parque General San Martin, 5500 Mendoza, Argentina

autor

Agrain F.A.

• Instituto Argentino de Investigaciones en Zonas Aridas, IADIZA, CCT-CONICET, Adrian Ruiz Leal s/n, Parque. General San Martin, 5500 Mendoza, Argentina

Bibliografia

• Acosta, M.C. and Premoli, A.C. 2010. Evidence of chloroplast capture in South American Nothofagus (subgenus Nothofagus, Nothofagaceae). Molecular Phylogenetics and Evolution 54: 235–242.
• Amigo, J. and Rodríguez, M.A. 2011. Bioclimatic and phytosociological dignosis of the species of the Nothofagus genus (Nothofagaceae) in South America. International Journal of Geobotanical Research 1: 1–120.
• Ancibor, E. 1991. Determinación xilológica de la madera fósil de una Fagaceae de la Formación Río Turbio (Eoceno), Santa Cruz, Argentina. Ameghiniana 27: 179–184.
• Archangelsky, S. and Romero, E.J. 1974. Los registros más antiguos del polen de Nothofagus (Fagaceae) de Patagonia (Argentina y Chile). Boletín de la Sociedad Botánica de México 33: 13–30.
• Bapst, D.W. 2012. Paleotree: an R package for paleontological and phylogenetic analyses of evolution. Methods in Ecology and Evolution 3: 803–807.
• Bastos, B.L., Dutra, T.L., Wilberger, T.P., and Trevisan, C. 2013. Uma flora do final do Cretáceo na Ilha Nelson, Ilhas Shetland do Sul, Península Antártica. Revista Brasileira de Paleontologia 16: 441–464.
• Bell, M.A. and Lloyd, G.T. 2015. Strap: an R package for plotting phylogenies against stratigraphy and assessing their stratigraphic congruence. Palaeontology 58: 379–389.
• Berkeley, M.J. 1842. On an edible fungus from Tierra del Fuego and allied Chilean species. Transactions of the Linnean Society of London 19: 37–43.
• Berry, E.W. 1937a. A Paleocene flora from Patagonia. Johns Hopkins University Studies in Geology 12: 22–50.
• Berry, E.W. 1937b. Eocene plants from Río Turbio in the territory of Santa Cruz, Patagonia. Johns Hopkins University Studies in Geology 12: 91–98.
• Berry, E.W. 1938. Tertiary flora from Río Pichileufú, Argentina. Geological Society of America, Special Paper 12: 1–149.
• Blume, C.L. von 1851. Ord. Cupulifereae. Museum Botanicum LugdunoBatavum 1: 305–320.
• Bremer, K. 1994. Branch support and tree stability. Cladistics 10: 295–304.
• Cantrill, D.J. and Poole, I. 2005. Taxonomic turnover and abundance in Cretaceous to Tertiary wood floras of Antarctica: implications for changes in forest ecology. Palaeogeography, Palaeoclimatology, Palaeoecology 215: 205–219.
• Cantrill, D.J. and Poole, I. 2012. The Vegetation of Antarctica Through Geological Time. 465 pp. Cambridge University Press, Cambridge.
• Cracraft, J. 1975. Historical biogeography and earth history: perspectives for a future synthesis. Annals of Missouri Botanical Garden 2: 227–250.
• Crane, P.R. 1985. Phylogenetic analysis of seed plants and the origin of angiosperms. Annals of the Missouri Botanical Garden 72: 716–793.
• Dettmann, M.E. 1994. Cretaceous vegetation: the microfossil record. In: R.S. Hill (ed.), History of the Australian Vegetation: Cretaceous to Recent, 43–170. Cambridge University Press, Cambridge.
• Dettmann, M.E., Pocknall, D.T., Romero, E.J., and Zamaloa, M.C. 1990. Nothofagidites Erdtman ex Potonié, 1960; a catalogue of species with note on the paleogeographic distribution of Nothofagus Bl. (southern beech). New Zealand Geological Survey Paleontological Bulletin 60: 1–79.
• Doyle, J.A. 2012. Molecular and fossil evidence on the origin of angiosperms. Annual Review of Earth and Planetary Sciences 40: 301–326.
• Dusén, P. 1899. Über die tertiäre Flora der Magallans-Länder. In: O. Nordenskjöld (ed.), Wissenschaftliche Ergebnisse der Schwedischen Expedition nach den Megallansländer 1895–97. Band I. Geologie, Geographie und Anthropologie, 87–108. Lithographisches Institut des Generalstabs, Stockholm.
• Dusén, P. 1908. Über die tertiäre Flora der Seymour Insel. In: O. Nordenskjöld (ed.),Wissenschaftliche Ergebnisse der Schwedischen Südpolar Expedition 1901–1903, Geologie und Paläontologie 3, 1–27. Norstedt and Söner, Stockholm.
• Dutra, T.L. 1997. Primitive leaves of Nothofagus (Nothofagaceae) in Antarctic Peninsula: an Upper Campanian record and a betulaceous more than fagaceous morphological character. Congreso Geológico Chileno, Antofagasta, Chile 9: 24–29.
• Dutra, T.L. 2004. Paleofloras da Antártica e sua relação com os eventos tectônicos e paleoclimáticos nas altas latitudes do sul. Revista Brasileira de Geociências 34: 401–410.
• Dutra, T.L. and Batten, D.J. 2000. Upper Cretaceous floras of King George Island, West Antarctica, and their palaeoenvironmental and phytogeographic implication. Cretaceous Research 21: 181–209.
• Espinosa, M.R. 1928. Dos especies nuevas de Nothofagus. Revista Chilena Historia de Natural 32: 171–197.
• Fiori, A. 1939. Fillite terziarie della Patagonia. II. Fillite del Río Ñirihuau. Giornale di Geologia 13: 1–27.
• Forster, G. 1789. Fasciculus Plantarum Magellanicum. Commentationes Societatis Regiae Scientiarum Gottingensis 9: 13–45.
• Frenguelli, J. 1941. Nuevos elementos florísticos del Magalleniano de Patagonia austral. Notas del Museo de La Plata 30: 173–202.
• Gandolfo, M.A. and Romero, E.J. 1992. Leaf morphology and key to species of Nothofagus Bl. Bulletin of the Torrey Botanical Club 119: 152–166.
• Goloboff, P.A. 1993. Estimating character weights during tree search. Cladistics 9: 83–91.
• Goloboff, P.A. 2014. Extended implied weighting. Cladistics 30: 20–272.
• Goloboff, P.A. and Farris, J.S. 2001. Methods for quick consensus estimation. Cladistics 17: 26–34.
• Goloboff, P.A. and Szumik, C.A. 2015. Identifying unstable taxa: efficient implementation of triplet-based measures of stability, and comparison with Phyutility and RogueNaRok. Molecular Phylogenetics and Evolution 88: 93–104.
• Goloboff, P.A., Farris, J.S., and Nixon, K.C. 2008. TNT, a free program for phylogenetic analysis. Cladistics 24: 774–786.
• Goloboff, P.A., Farris, J.S., Kallersjo, M., Oxelman, B., Ramírez, M.J., and Szumik, C.A. 2003. Improvements to resampling measures of groupsupport. Cladistics 19: 324–332.
• Goloboff, P.A., Torres, A., and Arias, J. 2018. Weighted parsimony outperforms other methods of phylogenetic inference under models appropriate for morphology. Cladistics 34: 407–437.
• Gradstein, F.M., Ogg, J.G., Smith, A.G., Agterberg, F.P., Bleeker, W., Cooper, R.A., Davydov, V., Gibbard, P., Hinnov, I.A., and House, M.R. 2004. A Geologic Time Scale 2004. 589 pp. Cambridge University Press, Cambridge.
• Hayes, P.A., Francis, J.E., Cantrill, D.J., and Crame, J.A. 2006. Palaeoclimate analysis of Late Cretaceous angiosperm leaf floras, James Ross Island, Antarctica. Geological Society, London, Special Publications 58: 49–62.
• Heenan, P.B. and Smissen, R.D. 2013. Revised circumscription of Nothofagus and recognition of the segregate genera Fuscospora, Lophozonia, and Trisyngyne (Nothofagaceae). Phytotaxa 146: 1–31.
• Hill, R.S. 1983. Nothofagus macrofossils from the Tertiary of Tasmania. Alcheringa 7: 169–183.
• Hill, R.S. 1991 Tertiary Nothofagus (Fagaceae) macrofossils from Tasmania and Antarctica and their bearing on the evolution of the genus. Botanical Journal of the Linnean Society 105: 73–112.
• Hill, R.S. 1992. Nothofagus: evolution from a southern perspective. Trends in Ecology and Evolution 7: 190–194.
• Hill, R.S. 1994. History of selected Australian taxa. In: R.S. Hill (ed.), History of the Australian Vegetation: Cretaceous to Recent, 390–419. Cambridge University Press, Cambridge.
• Hill, R.S. 2001 Biogeography, evolution and palaeoecology of Nothofagus (Nothofagaceae): The contribution of the fossil record. Australian Journal of Botany 49: 321–332.
• Hill, R.S. and Jordan, G.J. 1993. The evolutionary history of Nothofagus (Nothofagaceae). Australian Systematic Botany 6: 111–126.
• Hill, R.S. and Read, J. 1991. A revised infrageneric classification of Nothofagus (Fagaceae). Botanical Journal of the Linnean Society 105: 37–72.
• Hill, R.S., Hardwood, D.M., and Webb, P.N. 1996. Nothofagus beardmorensis (Nothofagaceae), a new species based on leaves from the Pliocen Sirius group. Trans-antarctic Mountains, Antarctica. Review of Paleobotany and Palynology 94: 11–24.
• Hill, R.S., Jordan, G.J., and Macphail, M.K. 2015. Why we should retain Nothofagus sensu lato? Australian Systematic Botany 28: 190–193.
• Hinojosa, L.F., Gaxiola, A., Pérez, M.F., Carvajal, F., Campano, M.F., Quattrocchio, M., Nishida, H., Uemura, K., Yabe, A., Bustamante, R., and Arroyo, M.T. 2016. Non-congruent fossil and phylogenetic evidence on the evolution of climatic niche in the Gondwana genus Nothofagus. Journal of Biogeography 43: 555–567.
• Hooker, J.D. 1844. Icones plantarum; or figures, with brief descriptive characters and remarks, of new or rare plants, selected from the authors herbarium. Plates 601–690. Baillière, London.
• Hünicken, M. 1967. Flora terciaria de los estratos de Río Turbio, Santa Cruz (Niveles plantíferos del Arroyo Santa Flavia). Revista de la Facultad de Ciencias Exactas, Físicas y Naturales de la Universidad de Córdoba. Serie Ciencias Naturales 56: 139–262.
• Iglesias, A. 2007. Estudio paleobotánico, paleoecológico y paleoambientalen secuencias de la Formación Salamanca, del Paleoceno Inferior en el sur de la Provincia de Chubut, Patagonia, Argentina. 244 pp. Ph.D. Dissertation, University of La Plata, La Plata.
• Jones, J.H. 1986. Evolution of the Fagaceae: the implications of foliar features. Annals of the Missouri Botanical Garden 73: 228–275.
• Jordan, G. 1999. A new Early Pleistocene species of Nothofagus and the climatic implications of co-ocurring Nothofagus fossils. Australian Systematic Botany 12: 757–76.
• Jordan, G. and Hill, R.S. 1994. Past and present variability in leaf length of evergreen members of Nothofagus subgenus Lophozonia related to ecology and population dynamics. New Phytologist 127: 377–390.
• Jordan, G. and Hill, R.S. 1999. The phylogenetic affinities of Nothofagus (Nothofagaceae) leaf fossils based on combined molecular and morphological data. International Journal of Plant Science 160: 1177–1188.
• Krasser, F. 1896. Bemerkungen zur Systematik der Buchen. Annalen des Naturhístoríschen Hofmuseums Wien 11: 155–163.
• Lanyon, S.M. 1985 Detecting internal inconsistencies in distance data. Systematic Zoology 34: 397–403.
• Leppe, M., Hinojosa, F., Nishida, H., Dutra, T., Wilberger, T., Trevisan, C., Ortuya, M.J., Pino, J.P., Mansilla, H., and Lobos, V. 2016a. Asyncronic oldest record of Nothofagus leaves in Antarctica and Patagonia. Boletín de la Asociación Latinoamericana de paleobotánica y palinología 16: 1–321.
• Leppe, M., Wilbeger T., Ortuya M.J., Ortiz, H. Bastías, J. Mansilla, H., and Dutra, T. 2016b. Oldest record of Nothofagus leaves in Nelson Island, South Shetland Islands, Antarctica: Implicances for biogeography. XXXIV SCAR Meetings and Open Science Conference, Kuala Lumpur, Abstract Book, 603. British Antarctic Survey, London.
• Linnaeus, C. 1753. Species plantarum, exhibentes plantas rite cognitas, ad genera relatas, cum differentiis specificis, nominibus trivialibus, synonymis selectis, locis natalibus, secundum systema sexuale digestas. Tomus 1 and 2. xii+1200 pp. Laurentius Salvius, Stockholm.
• Manos, P.S.1997. Systematics of Nothofagus (Nothofagaceae) based on rDNA spacersequences (ITS): taxonomic congruence with morphology and plastid sequences.American Journal of Botany 84: 1137–1137.
• Manos, P.S., Soltis, P.S., Soltis, D.E., Manchester, S.R., Oh, S.H., Bell, C.D., Dilcher, D.L., and Stone, D.E. 2007. Phylogeny of extant and fossil Juglandaceae inferred from the integration of molecular and morphological data sets. Systematic Biology 56: 412–430.
• Martin, P.G. and Dowd, J.M. 1993. Using sequences of rbcL to study phylogeny and biogeography of Nothofagus species. Australian Systematic Botany 6: 441–447.
• Melville, R. 1982. The biogeography of Nothofagus and Trigonobalanus and the origin of the Fagaceae. Botanical Journal of the Linnean Society 85: 75–88.
• Mirbel, C.F.B. 1827. Recherches sur la distribution géographique des Végétaux phanérogames de l’Ancien-Monde, depuis l’équateur jusqu’au pôle arctique; suivies de la description de neuf espèces de la famille des Amentacées. Mémoires du Museum d’histoire naturelle de Paris 14: 349–474.
• Nixon, K.C. 1982. In support of the Nothofagaceae Kuprianova. Botanical Society of America Miscellaneous Series 162: 102.
• Nixon, K.C. 1989. Origins of Fagaceae. In: P.R Crane and S. Blackmore (eds.), Evolution, Systematics, and Fossil History of the Hamamelidae, 23–43. Clarendon Press, Oxford.
• Nixon, K.C. and Carpenter, J.M. 1996. On simultaneous analysis. Cladistics 12: 221–241.
• Oersted, S.A. 1871. Bidrag til Kundskab om Egefamilien i Nutid og Fortid. Kongelige Danske Videnskabernes Selskabs Skrifter 9: 31–538.
• Paull, R. and Hill, R.S. 2003. Nothofagus kiandrensis (Nothofagaceae subgenus Brassospora), a new macrofossil leaf specie from Miocene sediments at Kienadra, New South Wales. Australian Systematic Botany 16: 549–559.
• Peterson, K.R, Pfister, D.H., and Bell, C. 2010. Cophylogeny and biogeography of the fungal parasite Cyttaria and its host Nothofagus, southern beech. Mycologia 102: 1417–1425.
• Phillipi, R.A. 1858. Plantarum novarum Chilensium: Centuria quarta. Linnaea 29: 1–47.
• Philipson, W.R. and Philipson, M.N. 1988. A classification of the genus Nothofagus (Fagaceae). Botanical Journal of the Linnean Society 98: 27–36.
• Poeppig, E.F. and Endlicher, S.F.L. 1838. Nova genera ac species plantarum quas in regno Chilensi Peruviano et in terra Amazonica. Volumen secundum. 74 pp. F. Hofmeister, Leipzig.
• Pol, D. and Norell, M.A. 2006. Uncertainty in the age of fossils and the stratigraphic fit to phylogenies. Systematic Biology 55: 512–521.
• Pol, D. and Escapa, I.H. 2009. Unstable taxa in cladistic analysis: identification and the assessment of relevant characters. Cladistics 25: 515–527.
• Poole, I. 2002. Systematics of Cretaceous and Tertiary Nothofagoxylon: implications for Southern Hemisphere biogeography and evolution of the Nothofagaceae. Australian Systematic Botany 15: 247–276.
• Poole, I. and Cantrill, D. J. 2006. Cretaceous and Cenozoic vegetation of Antarctica integrating the fossil wood record. Geological Society, London, Special Publications 258: 63–81.
• Poole, I., Hunt, R.H., and Cantrill, D.J. 2001. A fossil wood flora from King George Island: ecological implications for Antarctic Eocene vegetation. Annals of Botany 88: 33–54.
• Premoli, A.C. 1996. Leaf architecture of South American Nothofagus (Nothofagaceae) using traditional and new methods in morphometrics. Botanical Journal of the Linnean Society 121: 25–40.
• Premoli, A.C., Mathiasen, P., Acosta, M.C., and Ramos, V.A. 2011. Phylogeographically concordant chloroplast DNA divergence in sympatric Nothofagus s.s. How deep can it be? New Phytologist 193: 261–275.
• R Core Team 2017. R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna. http://www.R-project.org/.
• Read, J. 1990. Some effects of acclimation temperature on net photosynthesis in some tropical and extra-tropical Australasian Nothofagus species. The Journal of Ecology 78: 100–112.
• Reguero, M., Goin, F., Acosta Hospitaleche, C., Marenssi, S., and Dutra, T. 2013. The terrestrial biotic dimension of West Antarctica (WANT). In: M. Reguero, F. Goin, C. Acosta Hospitaleche, T. Dutra, and S. Marenssi (eds.), Late Cretaceous/Paleogene West Antarctica Terrestrial Biota and its Intercontinental Affinities, 55–110. Springer, Dordrecht.
• Romero, E.J. 1986. Fossil evidence regarding the evolution of Nothofagus Blume. Annals of the Missouri Botanical Garden 73: 276–283.
• Romero, E.J. and Dibbern, M.C. 1985. A review of the species described as Fagus and Nothofagus by Dusén. Palaeontographica Abteilung B 197: 123–137.
• Roth, A.W. 1788. Tentamen Florae Germanieae. Vol. 1. 560 pp. I.G. Mülleriano, Leipzig.
• Sauquet, H., Ho, S.Y., Gandolfo, M.A., Jordan, G.J., Wilf, P., Cantrill, D., Bayly, M.J., Bromham, L., Brown, G., Carpenter, R., Lee, D., Murphy, D., Kale Sniderman, J.M., and Udovicic, F. 2012. Testing the impact of calibration on molecular divergence times using s fossil-rich group: the case of Nothofagus (Fagales). Systematic Biology 61: 289–313.
• Setoguchi, H., Ono, M., Doi, Y., Koyama, H., and Tsuda, M. 1997. Molecular phylogeny of Nothofagus (Nothofagaceae) based on the atpB-rbcL intergenic spacer of the chloroplast DNA. Journal of Plant Research 110: 469–484.
• Springer, M.S., Teeling, E.C., Madsen, O., Stanhope, M.J., and de Jong, W.W. 2001. Integrated fossil and molecular data reconstruct bat echolocation. Proceedings of the National Academy of Sciences of the United States of America 98: 6241–6246.
• Steenis, C.G.G.J. van 1953. Results of the Archbold expeditions: Papuan Nothofagus. Journal of the Arnold Arboretum 34: 301–374.
• Swenson, U., Hill, R.S., and McLoughlin, S. 2000. Ancestral area analysis of Nothofagus (Nothofagaceae) and its congruence with the fossil record. Australian Systematic Botany 13: 469–478.
• Tanai, T. 1986. Phytogeographic and phylogenetic history of the genus Nothofagus Bl. (Fagaceae) in the southern hemisphere. Journal of the Faculty of Science, Hokkaido University, Series 4: Geology and Mineralogy 21: 505–582.
• Torres, T., Cisterna, M., Llanos, A., Galleguillos, H., and Le Roux, J.P. 2009. Nuevos registros de Nothofagus Bl. en Sierras Baguales, Última Esperanza, Patagonia, Chile. XII Congreso Geológico Chileno. Extended Abstracts, 12–19. Universidad de Chile, Santiago de Chile.
• Torres, T., Gutiérrez, N.M., Bostelmann, E., Le Roux, J.P., Oyarzún, J.L., Ugalde, R., Otero, R., and Hervé, F. 2013. Exceptionally preserved fossil flora of the Río Leona Formation in Sierra Baguales, Magallanes, Chile: insights into the early Neogene Patagonian ecosystems. Bolle ttino di Geofisica teorica ed applicata (Supplement B) 54: 352–355.
• Troncoso, A. 1991. Paleomegaflora de la Formación Navidad, Miembro Navidad (Mioceno), en el área de Matanzas, Chile central occidental. Boletín Museo Nacional de Historia Natural 42: 131–168.
• Troncoso, A. and Encinas, A. 2006. La tafoflora de cerro Centinela (Chile, VI Región): vegetación y clima de Chile central a fines del Mioceno-comienzos del Plioceno. Ameghiniana 43: 171–180.
• Veblen T.T., Donoso, C., Kitzberger T., and Rebertus, J. 1996. Ecology of southern Chilean and Argentinean Nothofagus forests. In: T.T. Veblen, R.S. Hill, and J. Read (eds.), The Ecology and Biogeography of Nothofagus Forests, 293–353. Yale University Press, New Haven.
• Vento, B., Gandolfo, A., Nixon, K., and Prámparo, M. 2017. Paleofloristic assemblage from the Paleogene Río Guillermo Formation, Argentina: Preliminary results of phylogenetic relationships of Nothofagus in South America. Historical Biology 29: 93–107.
• Vento, B. and Prámparo, M. 2018. Angiosperm association from the Río Turbio Formation (Eocene–?Oligocene) Santa Cruz, Argentina: Revision of Hünicken’s (1955) fossil leaves collection. Alcheringa: An Australasian Journal of Palaeontology 42: 125–153.

Identyfikatory

DOI

10.4202/app.00493.2018