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2002 | 07 | 2 |

Tytuł artykułu

Fluorescence correlation spectroscopy [FCS] as a tool to study DNA condensation with hexadecyltrimethylammonium bromide [HTAB]

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
The presented data show that the FCS technique can be used to detect the DNA condensation process induced with the cationic compound hexadecyltrimethylammonium bromide (HTAB). We have shown that HTAB induces plasmid condensation upon interaction with it. Condensation can be considered to be complete when the diffusion constant reaches its maximum. The HTAB induced increase in diffusion time does not correlate well with the changes observed when count rate and particle number are considered. This observation contradicts data published for another cationic agent, spermine. This apparent discrepancy proves that the mechanisms of interaction between these compounds and DNA are different. Consequently, the different characters of the plots of count rate, diffusion time, and particle number versus condensing agent concentration can be a source of additional information about the nature of cationic compound-DNA interaction.

Wydawca

-

Rocznik

Tom

07

Numer

2

Opis fizyczny

p.203-211,fig.

Twórcy

autor
  • Agricultural University, Norwida 25, 50-354 Wroclaw, Poland
autor
autor

Bibliografia

  • 1. Hud, N. V. and Polak, M. DNA-cation interactions: the major and minor grooves are flexible ionophores. Curr. Opin. Struct. Biol. 3 (2001) 293-301.
  • 2. Medhi, C., Mitchell, J. B. O., Price, S. L. and Tabor, A. B. Electrostatic factors in DNA interaction. Biopoly 52 (2000) 84-93.
  • 3. Rouzina, I. and Bloomfield, V. A. DNA bending by small, mobile multivalent cations. Biophys. J. 74 (1998) 3152-64.
  • 4. Rudnick, J. and Bruinsma, R. DNA-protein cooperative binding through variable-range elastic coupling. Biophys. J. 76 (1999) 1725-33.
  • 5. Eastman, S. J., Siegel, C., Tousignant, J., Smith, A. E., Cheng, S. H. and Scheule, R. K. Biophysical characterization of cationic lipid: DNA complexes. Biochim. Biophys. Acta 1325 (1997) 41-62.
  • 6. Harries, D., May, S., Gelbart, W. M. and Ben-Shaul, A. Structure, stability, and thermodynamics of lamellar DNA-lipid complexes. Biophys. J. 75 (1998) 159-173.
  • 7. Lasie, D. D., Strey, H., Stuart, M. C. A., Podgornik, R. and Frederik, P. M. The structure of DNA-liposome complexes. J. Am. Chem. Soc. 119 (1997) 832- 833.
  • 8. Bloomfield, V. A. DNA condensation by multivalent cations. Biopoly 44 (1997) 269-282.
  • 9. Safinya, C. R. Structures of lipid-DNA complexes: supramolecular assembly and gene delivery. Curr. Opin. Struct. Biol. 11 (2001) 440-448.
  • 10. Mel'nikov, S. M., Sergeyev, V. G., Mel'nikova, Y. S. and Yoshikawa, K. Folding of long DNA chains in the presence of distearyldimethylammonium bromide and unfolding induced by neutral liposomes. J. Chem. Soc. Faraday Trans. 93 (1997) 283-289.
  • 11. Thompson, N. L. Fluorescence correlation spectroscopy. In: Topics in Fluorescence Spectroscopy, (Lakowicz, J. R. Ed.), New York, USA: Plenum Press), Vol. I (1991) 337-377.
  • 12. Schwille, P., Bieschke, J. and Oehlenschlaeger, F. Kinetic investigations by fluorescence correlation spectroscopy: the analytical and diagnostic potential of diffusion studies. Biophys. Chem. 6 (1997) 211-228.
  • 13. Beneš, M., Hudeček, J., Anzenbacher, P., and Hof, M. Coumarin 6, hypericin, resorufins, and flavins: suitable chromophores for fluorescence correlation spectroscopy of biological molecules. Coll. Czech. Chem. Commun. 66 (2001) 855-869.
  • 14. Beneš, M., Billy, D., Hermens, W. and Hof, M. Muscovite (mica) allows the characterisation of supported bilayers by ellipsometry and confocal fluorescence correlation spectroscopy. Biol. Chem. 383 (2002) 331-335.
  • 15. Kral, T., Hof, M. and Langner, M. The Effect of spermine on plasmid condensation and dye release observed by fluorescence correlation spectroscopy. Biol. Chem. 383 (2002) 331-335.
  • 16. Kral, T., Langner, M., Beneš, M., Baczyńska, D., Ugorski M. and Hof, M. The application of fluorescence correlation spectroscopy in detecting DNA condensation. Biophys. Chem. (2002) 135-144.
  • 17. Geall, A. J. and Blagbrough, I. A. Rapid and sensitive ethidium bromide fluorescence quenching assay of polyamine conjugate DNA interactions for the analysis of lipoplex formation in gene therapy. J. Pharm. Biomed. Anal. 22 (2000) 849-859.

Typ dokumentu

Bibliografia

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