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2004 | 56 | 2 |

Tytuł artykułu

Zastosowanie metody multiplex PCR-RFLP do identyfikacji i roznicowania szczepow enterokokow

Autorzy

Warianty tytułu

EN
Application of multiplex PCR-RFLP method [multilocus RFLP] in identification and differentiation of enterococci

Języki publikacji

PL

Abstrakty

PL
Celem badań było ustalenie czy modyfikacja metody MLST opracowanej przez Sreedhar i wsp. (2002) do różnicowania szczepów enterokoków pozwala na uzyskanie wyników wystarczających do realizacji powyższego zadania. Wprowadzona modyfikacja polegała na zastąpieniu sekwencjonowania produktu amplifikacji analizą restrykcyjną. Wyniki analizy 32 szczepów Enterococcus faecalis izolowanych w regionie gdańskim potwierdziły przydatność powyższej modyfikacji do różnicowania szczepów enterokoków.
EN
The present study proposed use of modified multilocus sequence typing (MLST) approach, for subspecies differentiation of Enterococcus faecalis isolates. We disgesed with Sspl endonuclease product of amplification of three E. faecalis antigen-encoding genes (ace, encoding a collagen and laminin adhesin; efaA, encoding an endocarditis antigen; and salA, encoding a cell wall associated antigen) and one housekeeping gene (pyrC) of 32 E. faecalis isolates MLRA analysis of polymorphic regions of these four genes identified 23 distinct types 21,4 to 100% identity among the 32 isolates. Further studies are needed to evaluate the value of proposed method.

Wydawca

-

Rocznik

Tom

56

Numer

2

Opis fizyczny

s.133-137,tab.,rys.,bibliogr.

Twórcy

  • Akademia Medyczna, Gdansk

Bibliografia

  • 1. Caprioli TF, Zaccour S, Kasatiya S. Phage typing scheme for group D streptococci isolated from human urogenital tract. J Clin Microbiol 1975; 2: 311-7.
  • 2. Chiew YF, Hall LM. Comparison of three methods for the molecular typing of Singapore isolates of enterococci with high-level aminoglycoside resistances. J Hosp Infect 1998; 38: 223-30.
  • 3. Cocconcelli PS, Porro D, Galandini S, Senini L. Development of RAPD protocol for typing of strains of lactic acid bacteria and enterococci; Lett Appl Microbiol 1995; 21: 376-9.
  • 4. Danbing KE, Picard FJ, Martineau F i inni. Development of a PCR assay for rapid detection of Enterococci. J Clin Microbiol 2001; 37: 3497-03.
  • 5. Descheemaeker PC, Lammens B, Pot P i inni. Evaluation of arbitrarily primed PCR analysis and pulsed-field gel electrophoresis of large genomic DNA fragments for identification of enterococci important in human medicine. Int J Syst Bacteriol 1997; 47: 555-61.
  • 6. Gordillo ME, Singh KV, Murray EB. Comparison of ribotyping and pulsed-field gel electrophoresis for subspecies differentiation of strains of Enterococcus faecalis. J Clin Microbiol 1993; 31: 1570-4.
  • 7. Kuhn, IL, Burman G, Haeggman S i inni. Biochemical fingerprinting compared with ribotyping and pulsed-field gel electrophoresis of DNA for epidemiological typing of enterococci; J Clin Microbiol 1995; 33: 2812-7.
  • 8. Li X, Weinstock GM, Murray BE. Generation of auxotrophic mutants of Enterococcus faecalis. J Bacteriol 1995; 177: 6866-73.
  • 9. Malathum K, Singh KV, Weinstock GM, Murray BE. Repetitive sequence-based PCR versus pulsed-field gel electrophoresis for typing of Enterococcus faecalis at the subspecies level. J Clin Microbiol 1998; 36: 211-5.
  • 10. Murray BE. The life and times of the enterococcus. Clin Microbiol Rev 1999; 3: 46-65.
  • 11. Murray BE. Vancomycin-resistant enterococcal infections. N Engl J Med 2000; 342: 710-21.
  • 12. Murray BE, Singh KV, Heath JD i inni. Comparison of genomic DNAs of different enterococcal isolates using restriction endonucleases with infrequent recognition sites. J Clin Microbiol 1990; 28: 2059-63.
  • 13. Nallapareddy SR, Singh KV, Duh RV i inni. Diversity of ace, a gene encoding a microbial surface component recognizing adhesive matrix molecules, from different strains of Enterococcus faecalis and evidence for production of Ace during human infections. Infect Immun 2000; 68: 5210-17.
  • 14. Pryce TM, Wilson RD, Kulski JK. Identification of enterococci by ribotyping with horseradish-peroxidase-labelled 16S rDNA probes. J Microbiol Methods 1999; 36: 147-55.
  • 15. Rich RL, Kreikemeyer B, Owens RT i inni. Ace is a collagen-binding MSCRAMM from Enterococcus faecalis. J Biol Chem 1999; 274: 26939-45.
  • 16. Seetulsingh PS, Tomayko JF, Coudron PE i inni. Chromosomal DNA restriction endonuclease digestion patterns of beta-lactamase-producing Enterococcus faecalis isolates collected from a single hospital over a 7-year period. J Clin Microbiol 1996; 34:1892-6.
  • 17. Sreedhar R, Nallapareddy R, Ruay-Wang Duht T i inni. Molecular Typing of Selected Enterococcus faecalis Isolates: Pilot Study Using Multilocus Sequence Typing and Pulsed-Field Gel Electrophoresis. J Clin Microbiol 2002; p. 868-76
  • 18. Thorisdottir AS, Carias LL, Marshall SH i inni. IS6770, an enterococcal insertion-like sequence useful for determining the clonal relationship of clinical enterococcal isolates. J Infect Dis 1994; 170: 1539-48.
  • 19. Tomayko JF, Murray BE. Analysis of Enterococcus faecalis Isolates from intercontinental sources by multilocus enzyme electrophoresis and pulsed-field gel electrophoresis. J Clin Microbiol 1995; 33: 2903-07.
  • 20. Van de Peer, De Wachter R TREECON for Windows: a software package for the construction and drawing of evolutionary trees for the Microsoft Windows environment. Comput Applic Biosci. 1994; 10: 569-70.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

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