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1999 | 46 | 1 |

Tytuł artykułu

A human putative Suv3-like RNA helicase is conserved between Rhodobacter and all eukaryotes

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
We have cloned and sequenced a cDNA of the human homologue of the Saccharomyces cerevisiae Suv3 putative RNA helicase which is indispensable for mitochondrial function in yeast. The human Suv-3-like protein has a typical mitochondrial leader sequence. Northern blot data and analysis of ESTs in the data banks indicate that this human gene (SUPV3L1) is expressed in practically all tissues, though at different levels. Sequence homology analysis has shown a strong conservation of the protein in a number of eukaryotic organisms - plants, mammals and fungi, but no close homologues exist in bacteria with the exception of the purple bacterium Rhodobacter sphaeroides. This gene is thus ubiquitously present in all eukaryotic organisms.

Wydawca

-

Rocznik

Tom

46

Numer

1

Opis fizyczny

p.155-162,fig.

Twórcy

  • University of Warsaw, Warsaw, Poland
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Bibliografia

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  • 2. Koutnikova, H., Campuzano, V., Foury, F., DoUe, P., Cazzalini, 0. & Kooening, M. (1997) Studies of human, mnuge and yeast homo- logues indicate a mitochondrial function for frataxin. Natue Genetics 16, 345-351.
  • 3. Sinclair, DA., Mills, K. & Guarente, L. (1997) Accelerated aging and nucleolar fragmenta­tion in yeast sgsl mutants. Science 277, 1313-1316.
  • 4. Wallace, D.C. (1995) Mitochondrial DNA Variation in Human Evolution. Degenerative Disease and Aging. Am. J. Hum. Genet. 57, 201-223.
  • 5. Stepien, P.P., Margossian, S.P., Landsman, D. & Butow, R. (1992) The yeast nuclear gene 8uv3 affecting mitochondrial post-trans- criptional processes encodes a putative ATP- dependent RNA helicase. Proc. Natl. Acad. ScL U.S.A. 89, 6813-6817.
  • 6. Dmochowska, A., Golik, P. & Stepien, P.P. (1995) The novel nuclear gene DSS-1 of Sao charomyces cerevisiae is necessary for mito­chondrial biogenesis. Curr. Genet. 28, 108- 112.
  • 7. Margossian, S.P., Li, H., Zassenhaus, H.P. & Butow, R.A. (1996) The DexH box protein Suv3p is a component of a yeast mitochon­drial 3'-to-5' exoribonuclease that suppresses group I intron toxicity. Cell 84, 199-209.
  • 8. Adams, M.D. et al. (1995) Initial assessment of human gene diversity and expression patr terns based upon 83 million nucleotides of cDNA sequence. Nature 377 (Suppl.) 3-174.
  • 9. Minet, M. & Lacroute, F. (1990) Cloning and sequencing of human cDNA coding for multi­functional polypeptide of the purine pathway by complementation of the ade2-101 mutant in Saccharomyces cerevisiae. Curr. Genet. 18, 287-291.
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  • 11. Altschul, S.F., Madden, T.F., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W. & Lipman, D.J. (1997) Gapped BLAST and PSI-BLAST: A new generation of protein database search programs. Nucleic Acids Res. 25,3389-3402.
  • 12. Thompson, J.D., Higgins, D.H. & Gibson, T.J. (1994) CLUSTAL W: Improving the sensitiv­ity of progressive multiple sequence align­ment through sequence weighting, positions- specific gap penalties and weight matrix choice. Nucleic Acids Res. 22, 4673-4680.
  • 13. Henikoff, S. & Henikoff, J.G. (1993) Perform­ance evaluation of amino acid substitution matrices. Proteins 17, 49-61.
  • 14. Dayhoff, M.O. Barker. W.C. & Hunt, L.T. (1983) Establishing homologies in protein se­quences. Methods Enzymol 91, 524-545.
  • 15. Landes, C., Henault, A. & Risler, J.-L. (1992) A comparison of several similarity indices used in the classification of protein se­quences: A multivariate analysis. Nucleic Ac­ids Res. 20, 3631-3637.
  • 16. Wilson, R. e! al. (1994) 2.2 Mb of contiguous nucleotide sequence from chromosome III of C. elegans. Nature 368, 32-38.
  • 17.Sato, S., Kaneko, T., Kotani, H., Nakamura, Y., Asamizu, E., Miyajima, N. & Tabata, S. (1998) Structural analysis of Arabidopsis thali- ana Chromosome 5. IV. Sequence features of the regions of 1,456,315 bp covered by nine­teen physically assigned Pi and TAC clones. DNA Res. 5, 1-54.
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  • 20. Eki, T., Okumura, K., Shiratori, A., Abe, M., Nogami, M., Taguchi, H., Shibata, T., Mu­rakami, Y. & Hanaoka, F. (1996) Assignment of the closest human homologue of the yeast Dna2 helicase gene to chromosome band 10q21.3-q22.1. Genomics 37, 408-410.
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Typ dokumentu

Bibliografia

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Identyfikator YADDA

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