PL EN


Preferencje help
Widoczny [Schowaj] Abstrakt
Liczba wyników
1999 | 46 | 4 |

Tytuł artykułu

Fragments of LINE-1 retrotransposons flanked by inverted telomeric repeats are present in the bovine genome. Homology with human LINE-1 elements

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
In the bovine genome we found two intrachromosomal DNA fragments flanked by inverted telomeric repeats (GenBank Accession Nos. AF136741 and AF136742). The internal parts of the fragments are homologous exclusively to the human sequences and to the consensus sequence of the L1MC4 subfamily of LINE-1 retrotransposons which are widespread among mammalian genomes. We found that distribution of homologous human sequences within our fragments is not random, reflecting a complicated pattern of insertion mechanisms of and maintenance of retrotransposons in mammalian genomes. One of the possible explanations of the origin of LINE-1 truncated elements flanked by inverted telomeric repeats in the bovine genome is that extrachromosomal DNA fragments may be modified by telomerase and subsequently, transferred into chromosomal DNA.

Wydawca

-

Rocznik

Tom

46

Numer

4

Opis fizyczny

p.873-878,fig.

Twórcy

  • Institute of Biotechnology and Antibiotics, Staroscinska 5, 02-516 Warsaw, Poland

Bibliografia

  • 1. Blackburn, E.H. (1991) Structure and func­tion of telomeres. Nature 350, 569-573.
  • 2. Counter, C.M., Avilion, A A., LeFeuvre, C.E., Stewart, N.G., Greider, C.W., Harley, C.B. & Bacchetti, S. (1992) Telomere shortening asso­ciated with chromosome instability is arrested in immortal cells which express telomerase ac­tivity. EMBOJ. 11, 1921-1929.
  • 3. Bryan, T.M., Englezou, A., Gupta, J., Bacchetii, S. & Reddel, L.L. (1995) Telomere elongation in immortal human cells without detectable telomerase activity. EMBO J. 14, 4240-4248.
  • 4. Lundblad, V. & Wright, W.E. (1996) Telo­meres and telomerase: A simple picture be­comes complex. Cell 87, 369-375.
  • 5. Skowronski, J., Fanning, T.G. & Singer, M.F. (1988) Unit length line-1 transcripts in human teratocarcinoma cells. Mol Cell. Biol. 8, 1385-1397.
  • 6. Dombroski, B.A., Mathias, S.L., Nantha- kumar, E., Scott, A.F. & Kazazian, H.H., Jr. (1991) Isolation of an active human transposable element. (1991) Science 254, 1805-1808.
  • 7. Dombroski, B.A., Scott, A.F. & Kazazian, H.H., Jr. (1993) Two additional potential retrotransposons isolated from the human LI subfamily that contains an active retro- transposable element. Proc. Natl. Acad. ScL U.S.A. 90, 6513-6517.
  • 8. Sassaman, D.M., Dombroski, B.A., Moran, J.V., Kimberland, M.L., Naas, T.P., DeBerar- dinis, R.J., Gabriel, A., Swergold, G.D. & Kazazian, H.H., Jr. (1997) Many human Ll el­ements are capable of retro transposition. Na­ture Genet. 16, 37-43.
  • 9. Goffeau, A., Barrel!, B.G., Bussey, H., Davis, R.W., Dujon, B., Feldmann, H., Galibert, F., Hoheisel, J.D., Jacq, C., Johnston, M., Louis, E.J., Mewes, H.W., Murakami, Y., Philippsen, P., Tettelin, H. & Oliver, S.G. (1996) Life with 6000 genes. Science 274, 546-567.
  • 10. Dybczynski, I. & Phicienniczak, A. (1988) A protocol for DNA fragment extraction from polyacrylamide gels. Biotechniques 6, 924- 926.
  • 11. Clark, J.M. (1988) Novel non-templated nucle­otide addition reactions catalysed by pro- caryotic and eucaryotic DNA polymerases. Nu­cleic Acids Res. 16, 9677-9686.
  • 12. Sanger, F., Nicklen, S. & Coulson, A.R. (1977) DNA sequencing with chain-terminating inhib­itors. Proc. Natl. Acad. Sci. U.S.A. 74, 5463-5467.
  • 13. Altshul. S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Miller, W. & Lipman, D.J. (1997) Gapped BLAST and PSI-BLAST, a new gener­ation of protein database search programs. Nucleic Acids Res. 25, 3389-3402.
  • 14. Jurka, J., Klonowski, P., Dagman, V. & Pelton, P. (1996) CENSOR - a program for identifica­tion and elimination of repetitive elements from DNA sequences. Computers and Chemis­try 20, 119-122.
  • 15. Smit, A.F.A., Toth, G., Riggs, A.D. & Jurka, J. (1995) Ancestral, mammalian-wide subfamil­ies of LINE-1 repetitive sequences. J. Mol. Biol. 246, 401-417.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

bwmeta1.element.agro-article-f19db305-cdd4-4b1d-8dd1-cec84e4794ec
JavaScript jest wyłączony w Twojej przeglądarce internetowej. Włącz go, a następnie odśwież stronę, aby móc w pełni z niej korzystać.