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2002 | 07 | 2B |

Tytuł artykułu

Fruit plant germplasm characterisation using molecular markers generated in RAPD and ISSR-PCR

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
The genotypes of the strawberry (Fragaria x ananassa), apple (Malus domestica) and Ribes species (R. nigrum, R. rubrum and R. glossularia), maintained in our Institute’s collection and used in breeding programs, were screened for DNA markers. Twenty primers for RAPD (among 60 tested) and seven for ISSR (among 10 tested) were chosen as creating polymorphic DNA bands differentiating the investigated genotypes. Based on those identity markers, the genetic distance between genotypes was determined, and their relatedness was estimated. In many cases, both RAPD- and ISSR-based genetic similarity confirmed relatedness connected with biological origin and with the place where the cultivar was developed. However, some diversity connected with the technique used for molecular marker generation was observed. Generally, the similarity values based on ISSR data were higher than those based on RAPD. Parallel study using two data sets seems to enable a reduction in the number of potential mistakes connected with each method’s, technical limitations and ensures more precise relatedness determination.

Wydawca

-

Rocznik

Tom

07

Numer

2B

Opis fizyczny

p.785-794,fig.

Twórcy

autor
  • Research Institute of Pomology and Floriculture, Pomologiczna 18, 96-100 Skierniewice, Poland
autor
autor

Bibliografia

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  • 2. Cregan, P. B., Akkaya, M. S., Bhagwat, A. A., Lavi, U. and Rongwen, J. Length polymorphisms of simple sequence repeat (SSR) DNA as molecular markers in plants. Plant Genome Analysis. CRC Press, Boca Raton, Florida (Gresshoff, P. M. Ed.) (1994) 47-56.
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  • 5. Hokanson, S. C., Szewc-McFadden, A. K., Lamboy, W. F. and McFerson., J. R. Microsatellite (SSR) markers reveal genetic identities, genetic diversity and relationships in a Malus x domestica borkh. Core subset collection. Theor. Appl. Genet. 97 (1998) 671-683.
  • 6. Jarret, R. L. and Bowen, N. Simple sequence repeats (SSRs) for sweetpotato germplasm characterization. Plant Gen. Res. Newslett. 100 (1994) 9-11.
  • 7. Klein-Lankhorst, R. M., Vermunt, A., Weide, R., Liharska, T. and Zabel, P. Isolation of molecular markers for tomato (L. esculentum) using random amplified polymorphic DNA (RAPD). Theor. Appl. Genet. 83 (1991) 108-114.
  • 8. Koller, B., Lehman, A., McDermott, J. M. and Gessler, C. Identification of apple cultivars using RAPD markers. Theor. Appl. Genet 85 (1993) 901-904.
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  • 10. Lanham, P. G. and. Brennan, R. M. Characterization of genetic resources of redcurrant (Ribes rubrum Ribesia) using anchored microsatellite markers. Theor. Appl. Genet. 96 (1998) 917-21.
  • 11. Levi, A. and Rowland, I. J. Identifying blueberry cultivars and evaluating their genetic relationships using randomly amplified polymorphic DNA (RAPD) and simple sequence repeats (SSR) anchored primers. J. Amer. Soc. Hort. Sci. 122 (1997) 74-78.
  • 12. Meunier, J. R. and Grimont, P. A. D. Factors affecting reproducibility of random amplified polymorphic DNA fingerprinting. Res. Microbiol. 144 (1993) 373-379.
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  • 14. Mulis, K. B. and Faloona, F. A. Specific synthesis of DNA in vitro via a polymerase-catalysed chain reaction. Methods Enzymol. 155 (1987) 335-350.
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  • 17. Paran, I., Kasseli, R. V. and Michelmore, R. W. Identification of restriction fragment length polymorphism and random amplified polymorphic DNA markers linked to downy mildew resistance in lettuce using near-isogenic lines. Genome 34 (1991) 1021-1027.
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  • 19. Saiki, R. K., Scharf, S., Faloona, F., Mullis, K. B., Horn, G. T., Erlich, H. A. and Arnheim, N. A. Enzymatic amplification of -globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia. Science 230 (1985) 1350-1354.
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  • 21. Ziętkiewicz, E., Rafalski, A. and Labuda, D. Genome fingerprinting by simple seguence repeats (SSR)-anchored polymerase chain reaction amplification. Genomic 20 (1994) 176-183.

Typ dokumentu

Bibliografia

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