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2007 | 14 | 1 |

Tytuł artykułu

Detection of airborne microbes in a composting facility by cultivation based and cultivation-independent methods

Treść / Zawartość

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
Standard methods for quantifi cation of airborne bacteria are based on cultivation and counting of grown colonies. From complex natural environments it is known that only a small fraction of the total number of cells can be cultivated on routinely used agar-media. Direct microscopic cell counting after DNA-staining usually generates higher concentrations of one to two magnitudes. The objective of the presented study was to compare the concentrations of airborne bacteria sampled in a composting facility by using for any sample the cultivation on trytic soy agar (TSA) – agar, as well as direct counting after DAPI-staining. The concentrations after counting grown colonies were within a range of 105-107 cfu m-3. Concentrations of direct counted cells ranged between 106-109 microbes m-3. In these comparative measurements only 1.5-15.3% of the airborne bacterial cells enumerated by direct counting formed countable colonies after incubation on TSA-agar. Obviously, cultivation based methods underestimate the real amount of airborne microbes. In addition, from literature it is known that inactive or even dead cells can also have the potential to cause health effects. Consequently, a risk assessment based only on measuring colony forming units may, in some cases, not be sufficient.

Wydawca

-

Rocznik

Tom

14

Numer

1

Opis fizyczny

p.81-85,fig.,ref.

Twórcy

autor
  • Federal Institute for Work Safety and Health, Noldnerstr.40-42, 10317 Berlin, Germany
autor
autor

Bibliografia

  • 1. Amann R, Ludwig W, Schleifer KH: Phylogenetic identifi cation and in situ detection of individual microbial cells without cultivation. Microbial Rev 1995, 59, 143-169.
  • 2. Bussmann I, Philipp B, Schink B: Factors infl uencing the cultivability of lake water bacteria. J Microbiol Methods 2001, 47, 41-50.
  • 3. Griffi ths WD, DeCosemo GAL: The assessment of bioaerosols: Critical review. J Aerosol Sci 1994, 25, 1425-1458.
  • 4. Horner-Devine MC, Carney KM, Bohannan BJM: An ecological perspective on bacterial biodiversity. Proc R Soc Lond B 2004, 271, 113-122.
  • 5. Ishii K, Fukui M, Takii, S: Microbial succession during a composting process as evaluated by denaturing gradient gel electrophoresis analysis. J Appl Microbiol 2000, 89, 768-777.
  • 6. Jäckel U, Kämpfer P: Die Mikrobiologie der Kompostierung. In: Hösel G, Bilitewski, B, Schenkel, W, Schnurer H (Eds.): Müllhandbuch. Erich Schmidt Verlag, Berlin, Germany, 2003, 5, 5210, 1-24.
  • 7. Kaeberlein T, Lewis K, Epstein SS: Isolating „uncultivable“ microorganisms in pure culture in a cimulated natural environment. Science 2002, 296, 1127-1129.
  • 8. Kassen R, Rainey PB: The ecology and genetics of microbial diversity. Annu Rev Microbiol 2004, 58, 207-231.
  • 9. Kent AD, Triplett EW: Microbial communities and their interactions in soil and rhizosphere ecosystems. Annu Rev Microbiol 2002, 56, 211-236.
  • 10. Kolb S, Knief C, Stubner S, Conrad R: Quantitative detection of methanotrophs in soil by novel pmoA-targeted real-time PCR assays. Appl Environ Microbiol 2003, 69, 2423-2429.
  • 11. McDougald D, Rice SA, Weichart D, Kjelleberg St: Nonculturability: adaptation or debilitation? FEMS Microbiol Ecol 1998, 25, 1-9.
  • 12. Michel FCJr, Marsh TJ, Reddy CA: Bacterial community structure during yard trimming composting. In: Insam H, Riddech N, Klammer S (Eds.): Microbiology of Composting, 25-42. Springer, Berlin, Heidelberg 2002.
  • 13. Neef A, Amann R, Schleifer KH: Detection of microbial cells in aerosols using nucleic acid probes. Syst Appl Microbiol 1995, 18, 113-122.
  • 14. Neef A, Schäfer R, Beimfohr C, Kämpfer P: Fluorescence based rRNA sensor system for detection of whole cells of Saccharomonospora spp. and Thermoactinomyces spp. Biosens Bioelectron 2003, 18, 565-569.
  • 15. Palmgren U, Ström G, Blomquist G, Malmberg P: Collection of airborne microorganisms on nucleopore fi lters, estimation and analysis-CAMNEA Method. J Appl Bacteriol 1986, 61, 401-406.
  • 16. Peters S, Koschinsky St, Schwieger F, Tebbe ChrC: Succession of microbial communities during hot composting as detected by PCR-single-strand-conformation polymorphism-based genetic profi les of smallsubunit rRNA genes. Appl Environ Microbiol 2000, 66, 930-936.
  • 17. Riesenfeld CS, Schloss PD, Handelsman J: Metagenomics: genomic analysis of microbial communities. Annu Rev Genet 2004, 38, 525-552.
  • 18. Shahamat M, Levin M, Rahman I, Grim C, Heidelberg J, Stelma G, Colwell R: Evaluation of media for recovery of aerosol bacteria. Aerobiologia 1997, 13, 219-226.
  • 19. Taylor JP, Wilson B, Mills MS, Burns RG: Comparison of microbial numbers and enzymatic activities in surface soils and subsoils using various techniques. Soil Biol Biochem 2002, 34, 387-401.
  • 20. Torsvik V, Goksøyr J, Daade FL: High diversity in DNA of soil bacteria. Appl Environ Microbiol 1990, 56, 782-787.
  • 21. VDI 4253 Blatt 2. Measurement of airborne microorganisms and viruses in ambient air; culture based method for the determination of the concentration of moulds in air; Indirect method after sampling with gelatine/polycarbonate fi lters (Erfassung luftgetragener Mikroorganismen und Viren in der Außenluft, Verfahren zum kulturellen Nachweis der Schimmelpilz-Konzentration in der Luft; Indirektes Verfahren nach der Probenahme auf Gelatine/Polycarbonat-Filtern). Beuth, Berlin 2004.
  • 22. Nielsen BH, Würtz H, Breum NO, Poulsen OM: Microorganisms and endotoxin in experimentally generated bioaerosols from composting household waste. Ann Agric Environ Med 1997, 4, 159-168.
  • 23. Kämpfer P: Feste Abfallstoffe. In: Dott W, Merk HF, Neuser J, Osieka R, (Eds.): Lehrbuch der Umweltmedizin, 31-44. Wissenschaftliche Verlagsgesellschaft mbH, Stuttgart 2002
  • 24. Danneberg G, Grüneklee E, Seitz M, Hartung J, Driesel AJ: Microbial and endotoxin immission in the neighborhood of a composting plant. Ann Agric Environ Med 1997, 4, 169-173.
  • 25. Folmsbee M, Strevett KA: Bioaerosol concentration at an outdoor composting center. J Air Waste Manage Assoc 1999, 49, 554-561.
  • 26. Böhm R, Martens W, Phillipp W: Hygienic relevance of the extension of bacteria with the collection and treatment of waste. Abfallforum online. 22.
  • 27. Albrecht A, Kämpfer P: Potential overestimation of the actinomycetes concentration by growth of thermophilic species of Bacillus and Geobacillus on selective media for thermophilic actinomycetes. Gefahrenstoffe Reinhaltung der Luft 2006, 9, 365-367.

Typ dokumentu

Bibliografia

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