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2009 | 14 | 4 |

Tytuł artykułu

Molecular characterization of the niaD and pyrG genes from Penicillium camemberti, and their use as transformation markers

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
Genetic manipulation of the filamentous fungus Penicillium camemberti has been limited by a lack of suitable genetics tools for this fungus. In particular, there is no available homologous transformation system. In this study, the nitrate reductase (niaD) and orotidine-5′-monophosphate decarboxylase (pyrG) genes from Penicillium camemberti were characterized, and their suitability as metabolic molecular markers for transformation was evaluated. The genes were amplified using PCR-related techniques, and sequenced. The niaD gene is flanked by the nitrite reductase (niiA) gene in a divergent arrangement, being part of the putative nitrate assimilation cluster in P. camemberti. pyrG presents several polymorphisms compared with a previously sequenced pyrG gene from another P. camemberti strain, but almost all are silent mutations. Southern blot assays indicate that one copy of each gene is present in P. camemberti. Northern blot assays showed that the pyrG gene is expressed in minimal and rich media, and the niaD gene is expressed in nitrate, but not in reduced nitrogen sources. The functionality of the two genes as transformation markers was established by transforming A. nidulans pyrG- and niaD-deficient strains. Higher transformation efficiencies were obtained with a pyrG-containing plasmid. This is the first study yielding a molecular and functional characterization of P. camemberti genes that would be useful as molecular markers for transformation, opening the way for the future development of a non-antibiotic genetic transformation system for this fungus.

Wydawca

-

Rocznik

Tom

14

Numer

4

Opis fizyczny

p.692-702,fig.,ref.

Twórcy

autor
  • Universidad de Santiago de Chile USACH, Alameda 3363, Estacion Central 9170022, Santiago, Chile
autor
autor
autor
autor
autor

Bibliografia

  • 1. Hjört, C.M. Production of food additives using filamentous fungi. in: Genetically Engineered Food (Heller, K.J., Ed.), Wiley-VCH Verlag Gmbh & Co. KgaA, Weinheim, 2003, 86-99.
  • 2. Yamaguchi, S., Mase, T. and Takeuchi, K. Cloning and structure of the mono- and diacylglycerol lipase-encoding gene from Penicillium camembertii U-150. Gene 103 (1991) 61-67.
  • 3. Dupont, J., Magnin, S., Marti, A. and Brousse, M. Molecular tools for identification of Penicillium starter cultures used in the food industry. Int. J. Food Microbiol. 49 (1999) 109-118.
  • 4. Boualem, K., Waché, Y., Garmyn, D., Karbowiak, T., Durand, A., Gervais, P. and Cavin, J.F. Cloning and expression of genes involved in conidiation and surface properties of Penicillium camemberti grown in liquid and solid cultures. Res. Microbiol. 159 (2008) 110-117.
  • 5. Campbell, W.H. Structure and function of eukaryotic NAD(P)H:nitrate reductase. Cell. Mol. Life Sci. 58 (2001) 194-204.
  • 6. Wittmann, J.G., Heinrich, D., Gasow, K., Frey, A., Diederichsen, U. and Rudolph, M.G. Structures of the human orotidine-5'-monophosphate decarboxylase support a covalent mechanism and provide a framework for drug design. Structure 16 (2008) 82-92.
  • 7. Fierro, F., Laich, F., García-Rico, R.O. and Martín, J.F. High efficiency transformation of Penicillium nalgiovense with integrative and autonomously replicating plasmids. Int. J. Food Microbiol. 90 (2004) 237-248.
  • 8. De Maeseneire, S.L., De Groeve, M.R., Dauvrin, T., De Mey, M., Soetaert, W. and Vandamme, E.J. Cloning, sequence analysis and heterologous expression of the Myrothecium gramineum orotidine-5'-monophosphate decarboxylase gene. FEMS Microbiol. Lett. 261 (2006) 262-271.
  • 9. Pereira, J.F., de Queiroz, M.V., Lopes, F.J.F., Rocha, R.B. and de Araújo, E.F. Characterization, regulation, and phylogenetic analyses of the Penicillium griseoroseum nitrate reductase gene and its use as selection marker for homologous transformation. Can. J. Microbiol. 50 (2004) 891-900.
  • 10. Lubertozzi, D. and Keasling, J.D. Marker and promoter effects on heterologous expression in Aspergillus nidulans. Appl. Microbiol. Biotechnol. 72 (2006) 1014-1023.
  • 11. García-Rico, R.O., Fierro, F. and Martín, J.F. Heterotrimeric Gα protein Pga1 of Penicillium chrysogenum controls conidiation mainly by a cAMPindependent mechanism. Biochem. Cell Biol. 86 (2008) 57-69.
  • 12. Bainbridge, B.W., Spreadbury, C.L., Scalise, F.G. and Cohen, J. Improved methods for the preparation of high molecular weight DNA from large and small-scale cultures of filamentous fungi. FEMS Microbiol. Lett. 54 (1990) 113-117.
  • 13. Sambrook, J. and Russell, D.W. Molecular cloning: a laboratory manual (Third edition). Cold Spring Harbor Laboratory Press (2001).
  • 14. Yelton, M.M., Hamer, J.E. and Timberlake, W.E. Transformation of Aspergillus nidulans by using a trpC plasmid. Proc. Natl. Acad. Sci. USA 81 (1984) 1470-1474.
  • 15. Fischer, K., Barbier, G.G., Hecht, H.-J, Mendel, R.F., Campbell, W.H. and Schwarz, G. Structural basis of eukaryotic nitrate reduction: crystal structures of the nitrate reductase active site. Plant Cell 17 (2005) 1167-1179.
  • 16. Gómez, D., García, I., Scazzocchio, C. and Cubero, B. Multiple GATA sites: protein binding and physiological relevance for the regulation of the proline transporter gene of Aspergillus nidulans. Mol. Microbiol. 50 (2003) 277-289.
  • 17. Wong, K.H., Hynes, M.J. and Davis, M.A. Recent advances in nitrogen regulation: a comparison between Saccharomyces cerevisiae and filamentous fungi. Eukaryot. Cell 7 (2008) 917-925.
  • 18. Bernreiter, A., Ramon, A., Fernandez-Martinez, J., Berger, H., AraujoBazan, L., Espeso, E.A., Pachlinger, R., Gallmetzer, A., Anderl, I., Scazzocchio, C. and Strauss, J. Nuclear export of the transcription factor NirA is a regulatory checkpoint for nitrate induction in Aspergillus nidulans. Mol. Cell. Biol. 27 (2007) 791-802.
  • 19. Berger, H., Basheer, A., Böck, S., Reyes-Dominguez, Y., Dalik, T., Altmann, F. and Strauss, J. Dissecting individual steps of nitrogen transcription factor cooperation in the Aspergillus nidulans nitrate cluster. Mol. Microbiol. 69 (2008) 1385-1398.
  • 20. Slot, J.C. and Hibbett, D.S. Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: a phylogenetic study. PLoS ONE 2 (2007), e1097.
  • 21. Haas, H. and Marzluf, G. NRE, the major nitrogen regulatory protein of Penicillium chrysogenum, binds specifically to elements in the intergenic promoter regions of nitrate assimilation and penicillin biosynthetic gene clusters. Curr. Genet. 28 (1995) 177-183.
  • 22. Ellegren, H. Comparative genomics and the study of evolution by natural selection. Mol. Ecol. 17 (2008) 4586-4596.
  • 23. Traut, T.W. and Temple, B.R.S. The chemistry of the reaction determines the invariant amino acids during the evolution and divergence of orotidine 5`-monoposphate decarboxylase. J. Biol. Chem. 275 (2000) 28675-28681.
  • 24. Haas, H., Marx, F., Graessle, S. and Stöffler, G. Sequence analysis and expression of the Penicillium chrysogenum nitrate reductase encoding gene (niaD). Biochim. Biophys. Acta 1306 (1996) 81-84.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

bwmeta1.element.agro-article-b68f37ac-f674-4ebf-829d-6f7aa72385b8
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