Genomic polymorphism of isolates of Phytophthora ramorum from Polish ornamental nurseries compared with other European and North American isolates

• Autorzy: Wiejacha K , Trzewik A , Orlikowski L B , Szkuta G , Orlikowska T
• Języki publikacji: EN

Abstrakty

EN

We undertook an analysis of the genomic relationships between 15 isolates of Phytophthora ramorum Werres, de Cock et Man in't Veld, obtained from symptomatic plants growing in Polish ornamental nurseries, and 2 representatives of the European population and 3 of the North American population. Dendrograms were generated by UPGMA based on 786 amplification products obtained in ISSR-PCR reactions. The representatives of the European population and 13 of the "Polish" isolates formed a common cluster. The other 2 "Polish" isolates, which were found in 1998, and the 3 American representatives formed 2 separate clusters. There was no observed link between genomic distance on the basis of polymorphism and the origin of the isolates from plant species.

• Wydawca: -
• Czasopismo: Journal of Applied Genetics
• Rocznik: 2007
• Tom: 48
• Numer: 4
• Opis fizyczny: p.413-419,fig.,ref.

Twórcy

autor

Wiejacha K

• Research Institute of Pomology and Floriculture, Pomologiczna 18, 96-100 Skierniewice, Poland

autor

Trzewik A

• Research Institute of Pomology and Floriculture, Pomologiczna 18, 96-100 Skierniewice, Poland

autor

Orlikowski L B

• Research Institute of Pomology and Floriculture, Pomologiczna 18, 96-100 Skierniewice, Poland

autor

Szkuta G

• Main Inspectorate of Plant Health and Seed Inspection, Central Laboratory, Toruń, Poland

autor

Orlikowska T

• Research Institute of Pomology and Floriculture, Pomologiczna 18, 96-100 Skierniewice, Poland

Bibliografia

• Addinsoft, 2006. Data analysis and statistics with Microsoft Exel, Paris, France.
• Aljanabi SM, Martinez I, 1997. Universal and rapid salt-extraction of high quality genomic DNA for PCR-based techniques. Nucleic Acids Res 25: 4692-4693.
• [APHIS] Animal and Plant Health Inspection Service, 2007. APHIS List of regulated Hosts and Plant Associated with Phytophthora ramorum. http://aphis. usda.gov/plant_health/plant_pest_info/pram/downloads/ pdf_files/usdaprlist.pdf
• Arnau G, Lallemand J, Bourgoin M, 2001. Are AFLP markers the best alternative for cultivar identification? Acta Hortic 546: 301-306.
• Bonants P, Verstappen E, de Vries I, Wiejacha K, Ivors K, 2005. Molecular identification and detection of Phytophthora ramorum. Intern Conf Sudden Oak Death, Monterey, USA, Abstract: 24.
• Brasier CM, 2003. Phytophthora in European forests: Their rising significance. Sudden Oak Death Online Symposium. http://sod.apsnet.org/Papers/Brasier/ default.htm
• Brasier CM, 2003. Sudden oak death: Phytophthora ramorum exhibits transatlantic differences. Mycol Res 107: 258-259.
• Brasier CM, Kirk S, Rose J, 2004. Comparative host range, adaptive behaviour and breeding behaviour of Phytophthora ramorum isolates from Europe and North America. Abstr. 3-rd Workshop of IUFRO Phytophthora in Forests and Natural Ecosystems. Freising, Germany: 28.
• Brasier CM, Cooke DEL, Duncan JM, 1999. Origin of a new hybrid Phytophthora pathogen through interspecific hybridization. Proc Natl Acad Sci USA 96: 5878-5883.
• Davidson JM, Werres S, Garbelotto M, Hansen M, Rizzo DM, 2003. Sudden Oak Death and associated diseases caused by Phytophthora ramorum. Plant Management Network. http://www.ppdl.Purdue. edu/ppd//hot04/3-15pdfs/PHMSOD2003 .pdf
• [DEFRA] Department foe Environmental Food and Rural Affairs, 2005. http://www.defra.gov.uk
• Erwin DC, Ribeiro OK, 1996. Phytophthora Diseases Worldwide. APS Press, St. Paul, Minn: 269-279.
• Garbelotto M, Rizzo DM, 2005. A California-based chronological review (1995-2004) of research on Phytophthora ramorum, the causal agent of sudden oak death. Phytopathol Mediterr 44, 2: 127-143.
• Garbelotto M, Rizzo DM, Hayden K, 2002. Phytophthora ramorum and Sudden Oak Death in California: III. Pathogen genetics. In: Standiford R, McCreary D, Purcell KB, eds. Proc. 5th Oak Symposium: Oaks in California's changing landscape, San Diego, CA, USA: 765-774.
• Ivors KL, Hayden KJ, Bonants PJM, Rizzo DM, Garbelotto M, 2004. AFLP and phylogenetic analyses of North American and European populations of Phytophthora ramorum. Mycol Res 108: 378-392.
• Ivors K, Garbelotto M, Vries DE, Ruyter-Spira C, Hekkert TE, Rosenzweig N, Bonants P, 2006. Microsatellite markers identify three lineages of Phytophthora ramorum in US nurseries, yet single lineages in US forest and European nursery populations. Molec Ecol 15: 1493-1505.
• Martin FN, Tooley PW, 2003. Phylogenetic relationships of Phytophthora ramorum, P. nemorosa, and P. pseudosyringae, there species recovered from areas in California with sudden oak death. Mycol Res 107: 1379-1391.
• Molnar S, 2005. Evolutions and the origin of life. http://www.geocides.com.we_evolve/FUNGI/culture.html
• Orlikowski LB, Szkuta G, 2002. First record of Phytophthora ramorum in Poland. Phytopathol Pol 25: 69-79.
• Orlikowski LB, Szkuta G, 2004. First notice of Phytophthora ramorum on Calluna vulgaris, Photinia frasei and Pier is japonica in Polish container-ornamental nurseries. Phytopathol Pol 34: 87-92.
• Rizzo DM, Garbelotto M, Davidson JM, Slaughter GW, Koike ST, 2002. Phytophthora ramorum as the cause of extensive mortality of Quercus spp. and Lithocarpus densiflorus in California. Plant Dis 86: 205-214.
• Rizzo DM, Garbelotto M, Hansen EM, 2005. Phytophthora ramorum: integrative research and management of an emerging pathogen in California and Oregon forests. Ann Rev Phytopathol 43: 309-335.
• Werres S, Kaminski K, 2005. Characterisation of European and North American Phytophthora ramorum isolates due to their morphology and mating behaviour in vitro with heterothallic Phytophthora species. Mycol Res 109: 860-871.
• Werres S, Marwitz R, Man In't Veit WA, de Cock A WAM, Bonants PJM, de Weerdr M, et al. 2001. Phytophthora ramorum sp. nov., a new pathogen on Rhododendron and Viburnum. Mycol Res 105: 1155-1165.
• Werres S, de Merlier D, 2003. First detection of Phytophthora ramorum mating type A2 in Europe PI Dis 87: 1266.
• Werres S, Zielke B, 2003. First studies on the pairing of Phytophthora ramorum. Zeitschr. Pflanzenkrankheiten und Pflanzenschutz 110: 129-130.
• Wiejacha K, Szkuta G, Orlikowska T, 2002. Optimization of DNA isolation procedure as the first step in identification of Phytophthora spp. Bull PAN, Biol 50: 165-171.
• Woolhouse MEJ, Haydon DT, Antia R, 2005. Emerging pathogens: the epidemiology and evolution of species jump. Trends Ecol Evol 20: 238-244.