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2007 | 56 | 1 |

Tytuł artykułu

Molecular analysis of bacterial community diversity in sequencing batch reactor [SBR] operating in autotrophic conditions

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
In the present study the bacterial community structure in a sequencing batch reactor (SBR) operating in autotrophic conditions was determined in relation to temporal variations of NH₄-N, NO₂-N, NO₃-N levels in the effluent. Bacterial richness and composition were determined by PCR-DGGE (Polymerase Chain Reaction - Denaturing Gradient Gel Electrophoresis) of 16S rRNA and amoA genes, and RISA (Ribosomal Intergenic Spacer Analysis) technique. The applied approaches revealed that the composition of bacterial population in the studied SBR varied in time. A positive correlation between Shannon index of ammonia-oxidizing bacteria (AOB) diversity and ammonia level in the effluent was observed. The variation of total bacterial diversity did not reflect the changes in nitrification efficiency.

Wydawca

-

Rocznik

Tom

56

Numer

1

Opis fizyczny

p.45-51,fig.,ref.

Twórcy

autor
  • University of Warmia and Mazury in Olsztyn, Sloneczna 45G, 10-718 Olsztyn, Poland
autor

Bibliografia

  • Aoi S., Y. Shiramasa, Y. Masaki, S. Tsuneda, A. Hirata, A. Kitayama and T. Nagamune. 2004. Expression of arnoA mRNA in wastewater treatment processes examined by competitive RT-PCR. J. Biotechnol. 111: 111-120.
  • Boon N., W. De Windt, W. Verstraete and W. Top. 2002. Evaluation of nested PCR-DGGE (denaturing gradient gel electrophoresis) with group specific 16S rDNA primers for the analysis of bacterial communities from different treatment plants. FEMS Microbiol. Ecol. 39: 101-112.
  • Coelho M.A.Z., C. Russo and O.Q.F. Araujo. 2000. Optimization of sequencing batch reactor for biological nitrogen removal. Water Res. 34: 2809-2817.
  • Dahllöf I.2002. Molecular community analysis of microbial diversity. Curr. Opin. Biotechnol. 13: 213-217.
  • Daims H., U. Purkhold, L.E. Bjerrum, E. Arnold, P.A. Wilderer and M. Wagner. 2001. Nitrification in sequencing biofilm batch reactors: lessons from molecular approaches. Water Sci. Technol. 43: 9-18.
  • Dolzani L., E. Tonin, C. Lagatolla, L. Prandin and C. Monti-Bragadin. 1995. Identification of Acinetobacter isolates in the A. calcoaceticus-A. baumannii complex by restriction analysis of the 16S-23S rRNA intergenic-spacer sequences. J. Clin. Microbiol. 33: 1108-1113.
  • Fromin V. Hamelin J., Tarnawski S., Roesti D., Jourdain-Miserez K., N. Forestier N., S. Teyssier-Cuvelle S., Gillet F., Aragno M., and P. Rossi. 2002. Statistical analysis of denaturing gel electrophoresis (DGE) fingerprinting patterns. Environ. Microbiol. 4: 634-643.
  • Gürtler V. and V.A. Stanisich. 1996. New approaches to typing and identification of bacteria using the 16S-23S rDNA spacer region. Microbiology 142: 3-16.
  • Hill T.C.J., K.A. Walsh, J.A. Harris and B.F. Moffett. 2003. Using ecological diversity measures with bacterial communities. FEMS Microbiol. Ecol. 43: 1-11.
  • Jensen A., J.A. Webster and N. Strauss. 1993. Rapid identification of bacteria on the basis of polymerase chain reaction-amplified ribosomal DNA spacer polymorphism. Appt. Environ. Microbiol. 59: 945-952.
  • Juretschko S., G. Timmermann, M. Schmid, K.H. Schleifer, A. Pommerening-Röser, H.P. Koops and M. Wagner. 1998. Combined molecular and conventional analyses of nitrifying bacterium diversity in activated sludge: Nitrosococcus mobilis and Nitrospira-like bacteria as dominant populations. Appl. Environ. Microbiol. 64: 3042-3051.
  • Murray A.E., J.T. Hollibaugh and G. Orrego. 1996. Phylogenetic composition of bacterioplankton from two California estuaries compared by denaturing gradient gel electrophoresis of 16S rDNA fragments. Appl. Environ. Microbiol. 62: 2676-2680.
  • Muyzer G., E.C. de Waal and A.G. Uitterlinden. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes encoding for 16S rRNA. Appl. Environ. Microbiol. 59: 695-700.
  • Nicolaisen M.H. and N.B. Ramsing. 2002. Denaturing gradient gel electrophoresis (DGGE) approaches to study the diversity of ammonia-oxidizing bacteria. J. Microbiol. Methods 50: 189-203.
  • Rowan A.K., J.R. Snape, J.D. Fearnside, M.R. Barer, T.P. Curtis and I.M. Head. 2003. Composition and diversity of ammonia-oxidizing bacterial communities in wastewater treatment reactors of different design treating identical wastewater. FEMS Microbiol. Ecol. 43: 195-206.
  • Van der Gucht K., K. Sabbe, L. De Meester, N. Vloemans, G. Zwart, M. Gillis and W. Vyverman. 2001. Contrasting bacterioplankton community composition and seasonal dynamics in two neighboring hypertrophic freshwater lakes. Environ. Microbiol. 3: 680-690.
  • Wagner W. and A. Loy. 2002. Bacterial community composition and function in sewage treatment systems. Curr. Opin. Biotechnol. 13:218-227.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

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