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1997 | 38 | 3 |

Tytuł artykułu

DNA polymorphism in locus D1S80 in Poland. DNA profiling and detection of new alleles by heteroduplex formation between alleles of the same size

Treść / Zawartość

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
We have analysed allele distribution at the highly polymorphic variable number of tandem repeats (VNTR) locus D1S80 (pMCT118) in the Polish population using the, polymerase chain reaction (PCR) technique. Characteristics of the D1S80 locus makes it a very useful marker for population genetic research, genetic linkage studies and forensic identification of individuals. During our routine application of the D1S80 marker to paternity testing in several cases of homozygosity detected by polyacrylamide gel electrophoresis, heteroduplex formation for alleles 18 and 24 was also observed. Direct sequencing of PCR products revealed that alleles 18 and 24 of locus D1S80 actually represent a mixture composed of different sequences. Our observations indicate that identification of some 18 and 24 VNTR alleles based only on size estimated in electrophoretic analyses could lead to errors in paternity testing and DNA profiling.

Wydawca

-

Rocznik

Tom

38

Numer

3

Opis fizyczny

p.335-341,fig.

Twórcy

  • Institute of Human Genetics, Polish Academy of Sciences, Strzeszynska 32, 60-479 Poznan, Poland
  • Institute of Human Genetics, Polish Academy of Sciences, Strzeszynska 32, 60-479 Poznan, Poland
  • Laboratory of Molecular Genetics, Poznań, Poland
autor
  • Institute of Human Genetics, Polish Academy of Sciences, Strzeszynska 32, 60-479 Poznan, Poland
  • Laboratory of Molecular Genetics, Poznań, Poland
autor
  • Institute of Human Genetics, Polish Academy of Sciences, Strzeszynska 32, 60-479 Poznan, Poland
  • Laboratory of Molecular Genetics, Poznań, Poland
  • Department of Biochemistry and Biotechnology, Agricultural University, Poznań, Poland

Bibliografia

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  • Böhm I., Krawczak M., Nurnberg P., Hampe J., Hundrieser J., Poche H., Peters C., Słomski R., Kwiatkowska J., Nagy M., Popperl A., Epplen J.T., Schmidtke J. (1993b). Paternity testing with oligonucleotide probe (CAC)5/(GTG)5 a multi-center study. Forensic Sci. Int. 59: 101-107.
  • Deka R., Decroo S., Jin L., McGarvey T., Rothammer F., Ferrel R.E., Chakraborty R. (1994). Population genetic characteristics of the D1S80 locus in seven human populations. Hum. Genet. 94: 252-258.
  • Jeffreys A.J., Macleod A., Tamaki K., Neil D.L., Monckton D.G. (1991). Minisatellite repeat coding as a digital approach to DNA typing. Nature 354: 204-209.
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  • Kasai K., Nakamura Y., White R. (1990). Amplification of a variable number of tandem repeats (VNTR) locus (pMCT 118) by the polymerase chain reaction (PCR) and its application to forensic sciences. J. Forensic Sci. 35: 1196-1200.
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  • Nakamura Y., Carlson M., Krapcho K., Kanamori M., White R. (1988). New approach for isolation of VNTR markers. Am. J. Hum. Genet. 43: 854-859.
  • Nakamura Y., Julier C., Wolff R., Holm R., O’Connell P., Leppert M., White R. (1987). Characterization of a human "midisatellite" sequence. Nucleic Acids Res. 15: 2537-2547.
  • Prior T.W., Papp A.C., Snyder P.J., Burghes A.H.M., Sedra M.S., Western L.M., Bartello C., Mendell J.R. (1993). Identification of two point mutations and a one base deletion in exon 19 of the dystrophin gene by heteroduplex formation. Hum. Mol. Genet. 2: 311-313.
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  • Saiki R.K., Scharf S., Faloona F., Mullis K.B., Horn G.T., Erlich H.A., Arnheim N. (1985). Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia. Science 230: 1350-1354.
  • Sajantila A., Budowle B., Ström M., Johnsson V., Lukka M., Peltonen L., Ehnholm C. (1992). PCR amplification of alleles at the D1S80 locus: Comparison of a Finnish and a North American Caucasian population sample and forensic casework evaluation. Am. J. Hum. Genet. 50: 816-825.
  • Southern E.M. (1975). Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98: 503-517.
  • Wang Y-H., Barker P., Grifith J. (1992). Visualization of diagnostic heteroduplex DNAs from cystic fibrosis deletion heterozygotes provides an estimate of kinking of DNA by bulged bases. J. Biol. Chem. 267: 4911-4915.
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Typ dokumentu

Bibliografia

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Identyfikator YADDA

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