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2008 | 13 | 3 |

Tytuł artykułu

Kinetic models for stochastically modified ionic channels

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
Ionic channels form pores in biomembranes. These pores are large macromolecular structures. Due to thermal fluctuations of countless degrees-of-freedom of the biomembrane material, the actual form of the pores is permanently subject to modification. Furthermore, the arrival of an ion at the binding site can change this form by repolarizing the surrounding aminoacids. In any case the variations of the pore structure are stochastic. In this paper, we discuss the effect of such modifications on the channel conductivity. Applying a simple kinetic description, we show that stochastic variations in channel properties can significantly alter the ionic current, even leading to its substantial increase or decrease for the specific matching of some time-scales of the system.

Wydawca

-

Rocznik

Tom

13

Numer

3

Opis fizyczny

p.421-429,fig.,ref.

Twórcy

autor
  • Nicolaus Copernicus University, Grudziadzka 5, 87-100 Torun, Poland

Bibliografia

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  • 2. Zheng, J. Patch Fluorometry: shedding new light on ion channels. Physiology 21 (2006) 6-12.
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  • 6. Astumian, R.D. and Bier, M. Matching a diffusive and a kinetic approach for escape over a fluctuating barrier. Phys. Rev. Lett. 71 (1993) 1649- 1652.
  • 7. Iwaniszewski, J. Escape over fluctuating barrier: limits of small and large correlation time. Phys. Rev. E. 54 (1996) 3173-3184.
  • 8. Iwaniszewski, J., Kaufman, I.K., McClintock, P.V.E. and McKane, A.J. Resonances while surmounting a fluctuating barrier. Phys. Rev. E. 61 (2000) 1170-1175.
  • 9. Kramers, H.A. Brownian motion in the field of force and the diffusion model of chemical reactions. Physica 7 (1940) 284.
  • 10. Brey, J.J. and Casado-Pascual, J. Resonant activation in a simple kinetic model. Phys. Rev. E 50 (1994) 116-120.
  • 11. Läuger, P., Stephan, W. and Frehland, E. Fluctuations of barrier structure in ionic channels. Biochim. Biophys. Acta 602 (1980) 167-180.
  • 12. Iwaniszewski, J. Mean escape time over a fluctuating barrier. Phys. Rev. E. 68 (2003) 027105.
  • 13. French, R.J., Worley J.F.III, Wonderlin, W.F., Kularatna, A.S., Krueger, B.K. Ion permeation, divalent ion block, and chemical modification of single sodium channels. Description by single- and double- occupancy rate theory models. J. Gen. Physiol. 103 (1994) 447-470.
  • 14. Kurata, Y., Sato, R., Hisatome, I. and Imanishi, S. Mechanisms of cation permeation in cardiac sodium channel: Description by dynamic pore model. Biophys. J. 77 (1999) 1885-1904.
  • 15. Mironov, S.L. Conformational model for ion permeation in membrane channels: A comparison with multi-ion models and applications to calcium channel permeability. Biophys. J. 63 (1992) 485-496.
  • 16. Lee, K. and Sung, W. Effects of nonequilibrium fluctuations on ionic transport through biomembranes. Phys. Rev. E 60 (1999) 4681-4686.
  • 17. Moss, G.W.J. and Moczydlowski, E. Rectifying conductance substates in large conductance Ca2+-activated K+ channel: Evidence for a fluctuating barrier mechanism. J. Gen. Physiol. 107 (1996) 47-68.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

bwmeta1.element.agro-article-7d75d62a-93b2-42bd-9096-1d693a25c119
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