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2000 | 05 | 4 |

Tytuł artykułu

The detection and purification of a protein that recognizes a line 1 DNA repetitive sequence

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
A protein which binds specifically to MspI8 (a 454 bp long repeated sequence highly homologous to the 5’ untranslated region (5'UTR) of the LINE 1 sequence) was found and identified in nuclear extracts of rat liver cells. This protein was detected using the electrophoretic mobility shift assay (EMSA) and was purified by Q-Sepharose and DNA affinity chromatography. Its molecular mass was estimated by SDS electrophoresis as 29 kDa. The possibility that this protein (p29) is the rat analogue of human L1PBP-A, specific for the human LINE sequence LPE1, is discussed.

Wydawca

-

Rocznik

Tom

05

Numer

4

Opis fizyczny

p.511-521,fig.,ref.

Twórcy

autor
  • Russian Academy of Sciences, Tikhoretsky pr.4, 194064 St.Petersburg, Russia

Bibliografia

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  • 2. Fanning, T. G. and Singer, M. F. LINE 1: a mammalian transposable element. Biochim. Biophys. Acta 910 (1987) 203-212.
  • 3. Hattori, M., Kuhara, S., Takenaka, O. and Sakaki, Y. L1 family of repetitive sequences in primates may be derived from a sequence encoding a reverse transcriptase-related protein. Nature, 321 (1986) 625-628.
  • 4. Mathias, S. L., Scott, A. F., Kazazian, H. H. Jr., Boeke, J. D. and Gabriel, A. Reverse transcriptase encoded by a human transposable element. Science 254 (1991) 1808-1810.
  • 5. Charlesworth, B., Sniegowski, P. and Stephan, W. The evolutionary dynamics of repetitive DNA in eukaryotes. Nature 371 (1989) 215-220.
  • 6. Kolosha, V. O. and Martin, S. L. In vitro properties of first ORF protein in mouse LINE 1 support its role in ribonucleoprotein particle formation during retro transposition. Proc. Natl. Acad. Sci. USA 94 (1997) 10155- 10160.
  • 7. Hohjoh, H. and Singer, M. F. Cytoplasmic ribonucleoprotein complexes containing human LINE 1 protein and RNA. EMBO J. 15 (1996) 630-639.
  • 8. Hohjoh, H. and Singer, M. F. Sequence-specific single-strand RNA binding protein encoded by the human LINE 1 retrotransposon. EMBO J. 16 (1997) 6034-6043.
  • 9. Drechsler, M. and Royer-Pokora, B. A LINE element is present at the site of 300 kb deletion starting in intron 10 of the PAX6 gene in a case of familial aniridia. Hum. Genet. 98 (1996) 297-303.
  • 10. Kuo, K. W., Sheu, H. M., Huang, Y. S. and Leung, W. C. Expression of transposon LINE 1 is relatively human specific and function of the transcripts may be proliferation essential. Biochem. Biophys. Res. Commun. 253 (1998) 566-570.
  • 11. Tauchi, H., Matsuura, S., Isomura, M., Kinjo, T. Nakamura, A., Sakamoto, S., Kondo, N., Endo, S., Komatsu, K. and Nakamura, Y. Sequence analysis of 800-kb genomic DNA region on chromosome 8q21 that contains the Nijmegen breakage syndrome gene, NBS1. Genomics 55 (1999) 242-247.
  • 12. Van de Water, N., Wiliams, R., Ockelford, P. and Browett, P. A 30.7 kb deletion within factor VIII gene associated with LINE 1 element insertion. Thromb. Haemost. 79 (1998) 938-942.
  • 13. Swergold, G. D. Identification, characterization, and cell specificity of a human LINE 1 promoter. Mol. Cell. Biol. 10 (1990) 6718-6729.
  • 14. Asch, H. L., Eliacin, E., Fanning, T. G., Connolly, J. L., Bratthauer, G. and Asch, B. B. Comparative expression of the LINE 1 p 40 protein in human breast carcinomas and normal breast tissues. Oncol. Res. 8 (1996) 239-247.
  • 15. Hata, K. and Sakaki, Y. Identification of critical CpG sites for repression of LI transcription by DNA methylation. Gene 189 (1997) 227-234.
  • 16. Rzeszowska-Wolny, J. and Rogoliński, J. MspI8, the repetitive sequence specifically interacting with nuclear matrix of rat testis cells. Acta Biochim. Polon. 41 (1994) 459-471.
  • 17. Rogoliński, J., Widłak, P. and Rzeszowska-Wolny, J. Interactions of rat repetitive sequence MspI8 with nuclear matrix proteins during spermatogenesis. Acta Biochim. Polon. 43 (1996) 319-324.
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  • 20. Strauss, F. and Varshavsky, A. A protein binds to a satellite DNA repeat at three specific sites that would be brought into mutual proximity by DNA folding in the nucleosome. Cell 37 (1984) 889-901.
  • 21. Dean, P. D. G., Johnson, W. S. and Middle, F. A. Affinity Chromatography. IRL Press, Oxford, Washington DC,1985.
  • 22. Laemmli, U. K. Cleavage of the structural proteins during the assembly of the head of bacteriophage T4. Nature 227 (1970) 680-682.
  • 23. Dunn, M. J. Gel Electrophoresis: Proteins. BIOS Scientific Publishers, Oxford NY, 1993.
  • 24. Minakami, R., Kurose, K., Etoh, K., Furuhata, Y., Hattori, M. and Sakaki, Y. Identification of an internal cis-element for the human L1 transcription and a nuclear factor(s) binding to the element. Nucl. Acids Res. 20 (1992) 3139-3145.
  • 25. DeBerardinis, R. J. and Kazazian, H. H. Jr. Analysis of the promoter from an expanding mouse retrotransposon subfamily. Genomics 56 (1999) 317-323.
  • 26. Furano, A. V., Robb, S. M. and Robb, F. T. The structure of the regulatory region of the rat L1 (L1Rn, long interspersed repeated) DNA family of transposable elements. Nucl. Acids Res. 16 (1988) 9215-9231.
  • 27. Woodcock, D. M., Lawler, C. B., Linsenmeyer, M. E., Doherty, J. P. and Warren, W. D. Asymmetric methylation in the hypermethylated CpG promoter region of the human L1 retrotransposon. J, Biol. Chem. 272 (1997) 7810-7816.
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Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

bwmeta1.element.agro-article-6eee6d44-2ec7-4bdc-902d-353f89ea448f
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