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2008 | 49 | 3 |

Tytuł artykułu

Association analysis of thyroglobin gene variants with carcass and meat quality traits in beef cattle

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
Thyroid hormones play an important role in regulating the metabolism and can affect the homeostasis of fat deposition. The gene encoding thyroglobulin (TG), producing the precursor for thyroid hormones, has been proposed as a positional and functional candidate gene for a QTL with an effect on fat deposition. In the present study, we identified 6 novel SNPs at the 3' flanking region of the TG gene. The SNP marker association analysis indicated that the SNP markers G133C, G156A, C220T and A506C were significantly associated with marbling score (P<0.05, N=271). Animals with the new homozygote genotype had higher marbling scores than those with the other genotypes. Besides, the linkage disequilibrium analysis indicated that these 4 SNPs were completely linked (r² -1). Results of this study suggest that the TG-gene-specific SNP may be a useful marker for meat quality traits in future marker-assisted selection programmes in beef cattle.

Słowa kluczowe

Wydawca

-

Rocznik

Tom

49

Numer

3

Opis fizyczny

p.251-255,fig.,ref.

Twórcy

autor
  • College of Animal Science and Technology, Northwest A and F University, Yangling, Shaanxi, China
  • Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China
autor
  • Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China
autor
  • Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China
autor
  • College of Animal Science and Technology, Northwest A and F University, Yangling, Shaanxi, China
  • Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China
autor
  • Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China
autor
  • Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China
autor
  • Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China
autor
  • Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China
autor
  • Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing, China
  • College of Animal Science and Technology, Northwest A and F University, Yangling, Shaanxi, China

Bibliografia

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  • Ardlie KG, Kruglyak L, Seielstad M, 2002. Patterns of linkage disequilibrium in the human genome. Nat Rev Genet 3: 299-309.
  • Barendse W, Bunch R, Thomas M, Armitage S, Baud S, Donaldson N, 2004. The TG5 thyroglobulin gene test for a marbling quantitative trait loci evaluated in feedlot cattle. Aust J Exp Agr 44: 669-674.
  • Barendse WJ, 1999. Assessing lipid metabolism. International patent application PCT/AU98/00882 [International patent application WO 99/23248].
  • Burrell DN, Moser GHD, Hetzel J, Mizoguchi YSS, Hirano TKS, Sugimoto YSKZ, Mengersen KR, 2004. Meta analysis confirms associations of the TG5 thyroglobulin polymorphism with marbling in beef cattle. 29th International conference on animal genetics ISAG Tokyo: 135.
  • Casas E, Shackelford SD, Keele JW, Stone RT, Kappes SM, Koohmaraie M, 2000. Quantitative trait loci affecting growth and carcass composition of cattle segregating alternate forms of myostatin. J Anim Sci 78: 560-569.
  • Casas E, White SN, Riley DG, Smith TP, Brenneman RA, Olson TA, et al. 2005. Assessment of single nucleotide polymorphisms in genes residing on chromosomes 14 and 29 for association with carcass composition traits in Bos indicus cattle. J Anim Sci 83: 13-19.
  • Darimont C, Gaillard D, Ailhaud G and Negrel R, 1993. Terminal differentiation of mouse preadipocyte cells: adipogenic and antimitogenic role of triiodothyronine. Mol Cell Endocrinol 98: 67-73.
  • Grisart B, Coppieters W, Farnir F, Karim L, Ford C, Berzi P, et al. 2002. Positional candidate cloning of a QTL in dairy cattle: Identification of a missense mutation in the bovine DGAT1 gene with major effect on milk yield and composition. Genome Res 12: 222-231.
  • Mears GJ, Mir PS, Bailey DRC, 2001. Effect of Wagyu genetics on marbling, backfat and circulating hormones in cattle. Can J Anim Sci 81: 65-73.
  • Moore SS, Li C, Basarab J, Snelling WM, Kneeland J, Murdoch B, et al. 2003. Fine mapping of quantitative trait loci and assessment of positional candidate genes for backfat on bovine chromosome 14 in a commercial line of Bos taurus. J Anim Sci 81: 1919-1925.
  • Mullenbach R, Lagoda PJ, Welter C, 1989. An efficient salt-chloroform extraction of DNA from blood and tissues. Trends Genet 5: 391.
  • Rincker CB, Pyatt NA, Berger LL, Faulkner DB, 2006. Relationship among GeneSTAR marbling marker, intramuscular fat deposition, and expected progeny differences in early weaned Simmental steers. J Anim Sci 84: 686-693.
  • [SAS Institute] Statistical Analysis Systems User's Guide (Version 8.0), 1999. SAS Institute, Inc., Cary, NC, USA.
  • Shi YY, He L, 2005. SHEsis, a powerful software platform for analyses of linkage disequilibrium, haplotype construction, and genetic association at polymorphism loci. Cell Res 15: 97-98.
  • Smas CM, Sul HS, 1995. Control of adipocyte differentiation. Biochem J 309: 697-710.
  • Thaller G, Kuhn C, Winter A, Ewald G, Bellmann O, Wegner J, et al. 2003. DGATl, anew positional and functional candidate gene for intramuscular fat deposition in cattle. Anim Genet 34: 354-357.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

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