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2002 | 48 | 3 |

Tytuł artykułu

Metody i techniki molekularne stosowane w diagnostyce i epidemiologii zakazen grzybami chorobotworczymi

Treść / Zawartość

Warianty tytułu

Języki publikacji

PL

Abstrakty

EN
Molecular method B and techniques used in diagnosis and epidemiology or infections caused by pathogenic fungi. In this paper we reviewed the latest literature on molecular techniques used in diagnosis and epidemiology of infections caused by pathogenic fungi. Traditional methods used for the identification and typing of medically relevant fungi include morphological and biochemical analysis. These methods are time-consuming and base on phenotypic features what makes them unreliable. We described the usefulness in mycological studies of fast and very sensitive molecujar methods which rely on PCR and hybridization techniques.

Wydawca

-

Rocznik

Tom

48

Numer

3

Opis fizyczny

s.241-245,bibliogr.

Twórcy

  • Uniwersytet Lodzki, ul.Banacha 12/16, 90-237 Lodz
autor
autor

Bibliografia

  • Anderson M.J., Gull K., Denning D.W. 1996. Molecular typing by random amplification of polymorphic DNA and M13 Southern hybridization of related paired isolates of Aspergillus fumigatus. Journal of Clinical Microbiology 34: 87-93.
  • Baran E. 2001. Rozpoznawanie i leczenie zakazeń grzybiczych skóry i paznokci wywołanych przez dermatofity i drożdżaki. Forum Ekspertów 7, Biochemie Novartis Poland Sp. z o.o., Warszawa.
  • Bialek R., Fisher J., Feucht A., Najvar L.K., Dietz K., Knobloch J., Graybill J.R. 2001. Diagnosis and monitoring of murine histoplasmosis by a nested PCR assay. Journal of Clinical Microbiology 39: 1506-1509.
  • Bock M., Maiwald M., Kappe R., Nickel P., Naeher H. 1994. Polymerase chain reaction – based detection of dermatopbyte DNA with a fungus -specific primer system. Mycoses 37: 79-84.
  • Bojarski L., Dobrowolska A, Grabowski M., Czarnecki M, Jaworski A. 2001. Molekularna diagnostyka i epidemiologia zakażeń niektórymi gatunkami grzybów chorobotwórczych. Postępy Mikrobiologii 40: 311-324.
  • El Fari M., Tietz H-J., Presber W., Sterry W., Graeser Y. 1999. Development of an oligonucleotide probe specific for Trichophyton rubrum. British Journal of Dermatology 141: 240-245.
  • Fujita S., Senda Y., Nakaguchi S., Hashimoto T. 2001. Multiplex PCR using internal transcribed spacer l and 2 regions for rapid detection and identilication of yeast strains. Journal of Clinical Microbiology 39: 3617-3622.
  • Fukuhara H., Sor F., Drissi R., Dinouel N., Miyakawa I., Rosset S., Viola A.M. 1993. Linear mitochondrial DNAs of yeasts: frequency of occurrence and general features. Molecular Cell Biology 13: 2309-2314.
  • Gee S.F., Joly S., Soll D.R., Meis J.F.G.M., Verweij P.E., Polacheck I., Sullivan D.J., Coleman D.C. 2002. Identification of four distinct geneotypes of Candidti dubliniensis and detection of microevolution in vitro and in vivo. Journal of Clinical Microbiology 40: 556-574.
  • Gołąb E., Sobolewska A., Bitkowska E., Bednarska A., Berak H., Dzbeński T.H., Horban A. 2001. „Nested" PCR w diagnostyce przypadków pneumocystozowego zapalenia pluc (PCP) u pacjentów z AIDS. Wiadomosci Parazytologiczne 47: 521-525.
  • Hayette M-P., Vaira D., Susin F., Boland P., Christiansens G., Melin P., De Mol P. 2001. Detection of Aspergillus species DNA by PCR in bronchoalveolar lavage fluid. Journal of Clinical Microbiology 39: 2338-2340.
  • Jackson C.J., Barton R.C., Evans E. 1999. Species identilication and strain dilTerentiation of dermatophyte fungi by analysis of ribosomal DNA intragenic spacer regions. Journal of Clinical Microbiology 37: 931-936.
  • Jackson C.J., Barton R.C., Kelly S.L., Evans E. 2000. Strain identification of Trichophyton rubrum by specific amplification of subrepeat elements in the ribosomal DNA nontranscribed spacer. Journal of Clinical Microbiology 38: 4527-4534.
  • Jeske J., Lupa S., Seneczko F., Głowacka A., Ochęcka-Szymańska A. 1999. Epidemiology of dermatomycoses of humans in Central Poland. Part V. Tinea corporis. Mycoses 42: 661-663.
  • Kano R., Nakamura Y., Watanabe S., Tsjuimoto H., Hasegawa A. 2001. Identilication of Sporothrix schenckii based on sequences of the chitin synthase 1 gene. Mycoses 44: 261-265.
  • Kappe R., Okene C.N., Fauser C., Maiwald M., Sonntag H.G. 1998. Molecular probes for the detection of pathogenic fungi in the presence of human tissue. Journal of Medical Microbiology 47: 811-820.
  • Kurnatowska A. 1995. Wybrane zagadnienia mikologii medycznej. Wyd. Promedi, Łódź, Wyd.II -rozszerzone.
  • Kurnatowski P. 1995. Różnicowanie niektórych klinicznych postaci grzybic człowieka. W: Wybrane zagadnienia mikologii medycznej. (Red. A. Kurnatowska). Wyd. Promedi, Łódź, Wyd. II – rozszerzone.
  • Krajewska-Kułak E., Lewko J., Rolka H., Łukaszuk C., Karczewski J., Niczyporuk W., Zachowicz A. 2000. Grzybicze zakażenia szpitalne -narastajitcy problem. Mikologia Lekarska 7: 159-163.
  • Liu D., Coloe S., Baird R., Pedersen J. 2000. Application of PCR to the identification of dermatophyte fungi. Journal of Medical Microbiology 49: 493-497.
  • Lupa S., Seneczko F., Jeske J ., Głowacka A., Ochęcka-Szymańska A. 1999. Epidemiology of dermatomycoses of humans in Central Poland. Part IV. Onychomycosis due to dermatophytes. Mycoses 42: 657--659.
  • Nishio K., Kawasaki M., Ischizaki H. 1992. Phylogeny of the genera Trichophyton using mitochondrial DNA analysis. Mycopathologin 177: 127-132.
  • Nosek J., Dinouel N., Kovac L., Fukuhara H. 1995. Linear mitochondrial DNAs from yeasts: telomeres with large tandem repetitions. Molecular and General Genetics 247: 61-72.
  • Nosek J., Tomaska L., Pagacova B., Fukuhara H. 1999. Mitochondrial telomere-binding protein from Candida parapsilosis suggests an evolutionary adaptation of a nonspecific single-stranded DNA-binding protein. Journal of Biological Chemistry 274: 8850-8857.
  • Nosek J., Tomaska L., Rycovska A., Fukubara H. 2002 Mitochondrial telomeres as molecular markers for identification of the opportunistic yeast pothogen Candida parpsilosis. Journal of Clinical Microbiology 40: 1283-1289.
  • Okeke C., Tsuboi R., Kawai M., Hiroma M., Ogawa H. 2001. Isolation of an intron containing partial sequence of the gene encoding dermatophyte actin (ACT) and detection of a fragment of the transcript by reverse transription-nested PCR as a means of assessing the viability of dermatophytes in skin scales. Journal of Clinical Microbiology 39: 101-106.
  • Oliveira K., Haase G., Kurtzman C., Jorgen Hyldig-Nielsen J., Stedner H. 2001. Differentiation of Candida albicans and Candida dubliniensis by fluorescent in situ hybridization with peptide nucleic acid probes. Journal of Clinical Microbiology 39: 4138-4141.
  • Postlethwait P., Brian B., Oberle W.T., Sundstrom P. 1996. Molecular probe for typing strains of Candida albicans. Journal of Clinical Microbiology 34: 474-476.
  • Rath P.M. 2001. Phenotypic and genotypic characterization of reference strains of the genus Aspergillus. Mycoses 44: 261-265.
  • Schmidt K., Loeffier J., Hebart H., Schumacher U., Einsele H. 2001. Rapid extraction and detection of DNA from Candida species in research samples by MagNA Pure LC and the LightCycler System. Biochemica 3: 8-10.
  • Seneczko F., Lupa S., Jeske J., Głowacka A., Ochęcka-Szymańska A. 1999. Epidemiology of dermatomycoses of humans in Central Poland. Part I -Superlicial infections caused by yeasts and moulds. Mycoses 42: 297-305.
  • Soll D.R. 1992. High frequency switching in Candida albicans. Clinical Microbiology Reviews 5: 183-20.
  • Szepietowski J. 2001. Grzybice skóry i paznokci. Vademecum lekarza praktyka Wydawnictwo Medycyna Praktyczna. Kraków.
  • Vanittankom N., Cooper C., Chariyalertsak S., Youngchim S., Nelson K., Sirisanthana T. 1996. Restriction endonuclease analysis of Penicillium marneffei. Journal of Clinical Microbiology 34: 1834-1836.
  • Williams J.G.K., Kubelik A.R., Livak K.J., Rafalsky J.A., Tingey S.V. 1990. DNA polymorphisms amplified by arbitraly primers are useful as genetic markers. Nucleic Acids Research 18: 6531-6532.
  • Yamakami Y., Hashimoto A., Tokimatsu J., Nasu M. 1996. PCR detection of DNA specific for Aspergillus species in serum of patients with invasive aspergillosis. Journal of Clinical Microbiology 34: 2464-2468.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

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