MOFOID - not only the protein modelling server

• Autorzy: Szczesny P. , Wieczorek G. , Zielenkiewicz P.
• Języki publikacji: EN

Abstrakty

EN

MOFOID is a new server developed mainly for automated modeling of protein structures by their homology to the structures deposited in the PDB database. Selection of a template and calculation of the alignment is performed with the Smith-Waterman or Needleman-Wunsch algorithms implemented in the EMBOSS package. The final model is built and optimised with programs from the JACKAL package. The wide spectrum of options in the web-based interface and the possibility of uploading user’s own alignment make MOFOID a suitable platform for testing new approaches in the alignment building. The server is available at https://valis.ibb.waw.pl/mofoid/.

Słowa kluczowe

EN

homology modelling; PDB database; MOFOID server; protein structure; automated modelling

• Wydawca: -
• Czasopismo: Acta Biochimica Polonica
• Rocznik: 2005
• Tom: 52
• Numer: 1
• Opis fizyczny: p.267-269,ref.

Twórcy

autor

Szczesny P.

• Polish Academy of Sciences, A.Pawinskiego 5A, 02-106 Warsaw, Poland

autor

Wieczorek G.

autor

Zielenkiewicz P.

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