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2007 | 12 | 1 |

Tytuł artykułu

SIRE-1, a putative plant retrovirus is closely related to a legume Ty1-copia retrotransposon family

Autorzy

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
SIRE-1 is a potential soybean retrovirus which has a gene order similar to Ty1-copia retrotransposons but also contains an envelope-like open reading frame (ORF), which is characteristic of retroviruses. PCR and Southern analysis reveals that SIRE-1 is closely related to a legume-wide family of envelope-lacking Ty1-copia group retrotransposons which suggests that SIRE-1 was formed by the recent acquisition of an envelope gene by a Ty1-copia retrotransposon.

Wydawca

-

Rocznik

Tom

12

Numer

1

Opis fizyczny

p.12-=126,fig.,ref.

Twórcy

autor
  • University of Sussex, Falmer, Brighton, BN1 9QG, U.K.

Bibliografia

  • 1. Kumar, A. and Bennetzen, J.L. Plant retrotransposons. Ann. Rev. Genetics 33 (1999) 479-532.
  • 2. Wilson, C., Reitz, M.S., Okayama, H. and Eiden, M.V. Formation of infectious hybrid virions with gibbon ape leukemia virus and human T-cell leukemia virus retroviral envelope glycoproteins and the gag and pol proteins of Moloney murine leukemia virus. J. Virol. 63 (1989) 2374–2378.
  • 3. Peterson-Burch B.D., Wright, D.A., Laten H.M. and Voytas D.F. Retroviruses in plants? Trends Genet. 16 (2000) 151-152.
  • 4. Vicient C.M., Kalendar, R. and Schulman A.H. Envelope-class retroviruslike elements are widespread, transcribed and spliced, and insertionally polymorphic in plants. Genome Res. 11 (2001) 2041-2049.
  • 5. Wright, D.A. and Voytas, D.F. Athila4 of Arabidopsis and Calypso of soybean define a lineage of endogenous plant retroviruses. Genome Res. 12 (2002) 122-131.
  • 6. Neumann, P., Pozarkova, D., Koblizkova, A. and Macas, J. PIGY, a new plant envelope class LTR retrotransposon. Mol. Genet. Genomics 273 (2005) 43-53.
  • 7. Laten, H.M. Phylogenetic evidence for Ty1-copia –like endogenous retroviruses in plant genomes. Genetica 107 (1999) 87-93.
  • 8. Laten, H.M. Havecker, E.R., Farmer, L.M. and Voytas, D.F. SIRE1, a endogenous retrovirus family from Glycine max, is highly homogeneous and evolutionarily young. Mol. Biol. Evol. 20 (2003) 1222-1230.
  • 9. Pearce S.R., Stuart-Rogers C., Knox, M.R., Kumar, A., Ellis, T.H.N and Flavell A.J. Rapid isolation of plant Ty1-copia group retrotransposon LTR sequences for molecular marker studies Plant J. 19 (1999) 711-717.
  • 10. Higgins, D.G. and Sharp, P.M. CLUSTAL - A package for performing multiple sequence alignment on a microcomputer. Gene 73 (1998) 237-244.
  • 11. Pearce, S.R., Harrison, G., Li, D., Heslop-Harrison, J.S., Kumar, A. and Flavell, A.J. The Ty1-copia group retrotransposons in Vicia species: Copy number, sequence heterogeneity and chromosomal localisation. Mol. Gen. Genet. 250 (1996) 305-315.
  • 12. Malik, H.S., Hinikoff, S. and Eikbush, T.H. Poised for contagion: Evolutionary origins of the infectious abilities of invertebrate retroviruses. Genome Res. 10 (2000) 1307-1318.
  • 13. Boeke J.D., Eikbush T.H., Sandmeyer S.B. and Voytas D.F. Pseudoviridae. In: Virus Taxonomy: Eighth report of the international committee on taxonomy of viruses. (Fauquet, C.M. Ed,) Academic press, New York (2004) 663-672.
  • 14. Peterson-Burch, B.D. and Voytas, D.F. Genes of the pseudoviridae (Ty1/copia retrotransposons) Mol. Biol. Evol. 19 (2002) 1832-1845.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

bwmeta1.element.agro-article-12bccf6f-b5a2-44b8-8544-bbe0078bf83a
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