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2014 | 63 | 2 |

Tytuł artykułu

Alternative genotyping of drug-resistant Mycobacterium tuberculosis strains

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
The aim of the present research was to study the capability of a genotyping method for M. tuberculosis through detection of six VNTR-loci (MIRU10, MIRU26, MIRU31, MIRU39, MIRU40, ETR-A). Loci MIRU10, MIRU26, MIRU40 and ETR-A have exhibited high polymorphism in group non-Beijing, while loci MIRU26 and MIRU31 – in the Beijing family. A combined detection of all six loci for fingerprinting of the isolates both from Beijing and non-Beijing was highly effective (Hunter-Gaston index was 0.88 and 0.93 correspondently), especially in areas with limited financial resources and high prevalence of multidrug resistant M. tuberculosis strains.

Słowa kluczowe

Wydawca

-

Rocznik

Tom

63

Numer

2

Opis fizyczny

p.249-253,fig.,ref.

Twórcy

  • Department of General and Clinical Pharmacology, Odesa National Medical University, Odesa, Ukraine
  • Department of General and Clinical Pharmacology, Odesa National Medical University, Odesa, Ukraine
  • Department of General and Clinical Pharmacology, Odesa National Medical University, Odesa, Ukraine

Bibliografia

  • Allix-Béguec C., D. Harmsen and T. Weniger. 2008. Evaluation and strategy for use of MIRU-VNTRplus, a multifunctional database for online analysis of genotyping data and phylogenetic identification of Mycobacterium tuberculosis complex isolates. J. Clin. Microbiol. 46: 2692.
  • Alonso-Rodríguez N., M. Martínez-Lirola and M. Herránz. 2008. Evaluation of the new advanced 15-loci MIRU-VNTR genotyping tool in Mycobacterium tuberculosis molecular epidemiology studies, BMC Microbiol. available: http://www.biomedcentral. com/1471-2180/8/34
  • Antonenko K.O., V.I. Kresyun and P.B. Antonenko. 2010. Mutations leading to drug-resistant Mycobacterium tuberculosis infection in Ukraine, Central European Journal of Medicine 5: 30.
  • Anyo G., J. Allen and C. Reddy. 2007. Re-infection vs reactivation as causes of tuberculosis recurrence in a high-burden country, The Inter-national journal of tuberculosis and lung diseases, 11, suppl. 1: 162.
  • Banu S., V.G. Stephen and P. Si P. 2004. Genotypic Analysis of Mycobacterium tuberculosis in Bangladesh and Prevalence of the Beijing Strain, J. Clin. Microbiol. 42: 674.
  • Ivanov I. Iu, V.N. Stepanshina and M. Iu. Lipin. 2004. Spoligotypes of clinical Mycobacterium tuberculosis strains isolated in patients with tuberculosis in the Central Region of Russia, Probl. Tuberk. Bolezn. Legk. 5: 23.
  • Mokrousov I., T. Otten and B. Vyshnevskiy. 2003. Allele-Specific rpoB PCR Assays for Detection of Rifampin-Resistant Mycobacterium tuberculosis in Sputum Smears, Antimicrobial agents and chemotherapy 47: 2231.
  • Nikolayevskyy V.V., T.J. Brown and Y.I. Bazhora. 2007. Molecular epidemiology and prevalence of mutations conferring rifampicin and isoniazid resistance in Mycobacterium tuberculosis strains from the southern Ukraine. Clin. Microbiol. Infect. 13: 129.
  • Nikolayevskyy V.V. 2005. Optimization of genotyping strategy of Mycobacterium tuberculosis in Odessa district of Ukraine: comparing of spolygotyping method and VNTR, The Odessa Medical Journal (in Ukrainian) 3: 32.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

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