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2015 | 71 | 09 |

Tytuł artykułu

Myocardial and pericardial 2-DE protein profiles of African catfish, Clarias gariepinus

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
The present study was carried out to introduce a proteomic workflow based on two-dimensional gel electrophoresis (2-DE) and matrix-assisted laser desorption/ionization time of flight mass spectrometry (MALDI-TOF MS) as a tool for creating protein profiles of the myocardium and pericardium of African catfish (Clarias gariepinus). The experiment was carried out on five healthy 8-month-old males. Myocardial and pericardial proteins within the isoelectric point ranging from 3.0 to 10.0 were separated by high resolution 2-DE. Subsequently, 335 reproducible protein spots (125 from myocardial and 210 from pericardial tissue) were excised from the gels and submitted for identification by PMF (peptide mass fingerprinting). As a result, 38 protein spots were successfully identified and corresponded to 32 distinct myocardial and pericardial gene products. These proteins included binding, enzymatic, structural and regulatory proteins. Two-dimensional (2-D) maps presented in the current study provide a basic overview of myocardial and pericardial proteins of African catfish. These maps might be useful for designing further proteomic studies aimed at elucidating the patterns of cardiac adjustments to various physiological and/or pathophysiological factors, including environmental stressors.

Słowa kluczowe

Wydawca

-

Rocznik

Tom

71

Numer

09

Opis fizyczny

p.557-562,fig.,ref.

Twórcy

  • Department of Physiology, Cytobiology and Proteomics, Faculty of Biotechnology and Animal Husbandry, West Pomeranian University of Technology, Doktora Judyma 6, 71-466 Szczecin, Poland
autor
  • Department of Physiology, Cytobiology and Proteomics, Faculty of Biotechnology and Animal Husbandry, West Pomeranian University of Technology, Doktora Judyma 6, 71-466 Szczecin, Poland
  • Department of Physiology, Cytobiology and Proteomics, Faculty of Biotechnology and Animal Husbandry, West Pomeranian University of Technology, Doktora Judyma 6, 71-466 Szczecin, Poland
  • Department of Physiology, Cytobiology and Proteomics, Faculty of Biotechnology and Animal Husbandry, West Pomeranian University of Technology, Doktora Judyma 6, 71-466 Szczecin, Poland
autor
  • Department of Physiology, Cytobiology and Proteomics, Faculty of Biotechnology and Animal Husbandry, West Pomeranian University of Technology, Doktora Judyma 6, 71-466 Szczecin, Poland
autor
  • Department of Physiology, Cytobiology and Proteomics, Faculty of Biotechnology and Animal Husbandry, West Pomeranian University of Technology, Doktora Judyma 6, 71-466 Szczecin, Poland

Bibliografia

  • 1. Abbaraju N. V., Boutaghou M. N., Townley I. K., Zhang Q., Wang G., Cole R. B., Rees B. B.: Analysis of tissue proteomes of the Gulf Killifish, Fundulus grandis, by 2D electrophoresis and MALDI-TOF/TOF mass spectrometry. Integr. Comp. Biol. 2012, 52, 626-635.
  • 2. Abramsson A., Westman-Brinkmalm A., Pannee J., Gustavsson M., von Otter M., Blennow K., Brinkmalm G., Kettunen P., Zetterberg H.: Proteomics profiling of single organs from individual adult zebrafish. Zebrafish 2010, 7, 161-168.
  • 3. Bouley J., Chambon C., Picard B.: Mapping of bovine skeletal muscle proteins using two-dimensional gel electrophoresis and mass spectrometry. Proteomics 2004, 4, 1811-1824.
  • 4. Forné I., Abián J., Cerdà J.: Fish proteome analysis: model organisms and non-sequenced species. Proteomics 2010, 10, 858-872.
  • 5. Görg A., Obermaier C., Boguth G., Harder A., Scheibe B., Wildgruber R., Weiss W.: The current state of two-dimensional electrophoresis with immobilized pH gradients. Electrophoresis 2000, 21, 1037-1053.
  • 6. Hanson L. M., Ip Y. K., Farrell A. P.: The effect of temperature acclimation on myocardial β-adrenoceptor density and ligand binding affinity in African catfish (Claris gariepinus). Comp. Biochem. Physiol. Part A 2005, 141, 164-168.
  • 7. Herosimczyk A., Dejeans N., Sayd T., Ożgo M., Skrzypczak W. F., Mazur A.: Plasma proteome analysis: 2D gels and chips. J. Physiol. Pharmacol. 2006, 57(Suppl.7), 81-93.
  • 8. Klaiman J. M., Fenna A. J., Shiels H. A., Macri J., Gillis T. E.: Cardiac remodelling in fish: strategies to maintain heart function during temperature change. PLoS One 2011, 6, e24464.
  • 9. Li P., Hulak M., Li Z. H., Sulc M., Psenicka M., Rodina M., Gela D., Linhart O.: Cryopreservation of common carp (Cyprinus carpio L.) sperm induces protein phosphorylation in tyrosine and threonine residues. Theriogenology 2013, 80, 84-89.
  • 10. Lu J., Xu Q., Zheng J., Liu H., Li J., Chen K.: Comparative proteomics analysis of cardiac muscle samples from pufferfish Takifugu rubripes exposed to excessive fluoride: initial molecular response to fluorosis. Toxicol. Mech. Methods 2009, 19, 468-475.
  • 11. Lu J., Zheng J., Liu H., Li J., Chen H., Chen K.: Protein profiling analysis of skeletal muscle of a pufferfish, Takifugu rubripes. Mol. Biol. Rep. 2010, 37, 2141-2147.
  • 12. Ndimele P. E., Owodeinde F. G.: Comparative reproductive and growth performance of Clarias gariepinus (Burchell, 1822) and its hybrid induced with synthetic hormone and pituitary gland of Clarias gariepinus. Turk. J. Fish Aquat. Sci. 2012, 12, 619-626.
  • 13. Parrington J., Coward K.: Use of emerging genomic and proteomic technologies in fish physiology. Aquat. Living Resour. 2002, 15, 193-196.
  • 14. Shaliutina A., Hulak M., Li P., Sulc M., Dzyuba B., Linhart O.: Comparison of protein fractions in seminal plasma from multiple sperm collections in sterlet (Acipenser ruthenus). Reprod. Domest. Anim. 2013, 48,156-159.
  • 15. Singh S. K., Rakesh K. S., Ramamoorthy K., Saradhi A. V. P., Idris M. M.: Proteome profile of Zebrafish brain based on gel LC-ESI MS/MS analysis. J. Proteomics Bioinform. 2010, 4, 135-142.
  • 16. Sveinsdottir H., Gudmundsdottir A.: Proteome analysis of abundant proteins in early Atlantic cod (Gadus morhua) larvae. Icel. Agric. Sci. 2011, 24, 23-31.
  • 17. Westermeier R.: Sensitive, quantitative and fast modifications for coomassie blue staining of polyacrylamide gels. Proteomics 2006, 6 (Suppl.1), 61-64.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

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