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2013 | 31 | 2 |

Tytuł artykułu

Associations of new rSNPs with eggshell thickness in Rhode Island layers

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
Six fragments were sequenced of the regulatory and coding regions of the expressed sequence ChEST985k21 (accession number CR523443), which had been shown to affect eggshell thickness.Six sites of single nucleotide polymorphism (SNP) were found, five of them located in the regulatory region and one within the ORF. The binding sites of transcriptional factors for all obtained SNPs were revealed to be present in one allelic variant. Based on this fact they were considered as rSNPs.Genotyping of 46 Rhode Island Red birds with thick (390±13 μm) and 45 with thin eggshell (316 ± 21μm) was done. Significant difference in allelic frequency was shown of rSNPs ST2_1, ST3_1,ST3_2, ST3_3. Genotypic classes of rSNPs ST2_1, ST3_1, ST3_2, ST3_3 and ST6_1 were shown to have significantly different shell thickness. These data could probably provide a tool for markerassisted selection for optimization of egg shell thickness in Rhode Island layers.

Słowa kluczowe

Wydawca

-

Rocznik

Tom

31

Numer

2

Opis fizyczny

p.165-172,ref.

Twórcy

autor
  • Laboratory of Molecular Genome Organization, Institute of Farm Animal Genetics and Breeding, Russian Academy of Agricultural Science, Moskovskoye sh.55A, St.Petersburg-Pushkin 196601, Russia
  • Laboratory of Molecular Genome Organization, Institute of Farm Animal Genetics and Breeding, Russian Academy of Agricultural Science, Moskovskoye sh.55A, St.Petersburg-Pushkin 196601, Russia
  • Laboratory of Molecular Genome Organization, Institute of Farm Animal Genetics and Breeding, Russian Academy of Agricultural Science, Moskovskoye sh.55A, St.Petersburg-Pushkin 196601, Russia
autor
  • Department of Molecular and Biometric Techniques, Museum and Institute of Zoology, Polish Academy of Sciences, Wilcza 64, Warsaw, 00-679 Poland
autor
  • Department of Molecular Cytogenetics, Institute of Genetics and Animal Breeding, Polish Academy of Sciences, Jastrzebiec, 05-552 Magdalenka, Poland
autor
  • Department of Molecular Cytogenetics, Institute of Genetics and Animal Breeding, Polish Academy of Sciences, Jastrzebiec, 05-552 Magdalenka, Poland
autor
  • Department of Molecular Cytogenetics, Institute of Genetics and Animal Breeding, Polish Academy of Sciences, Jastrzebiec, 05-552 Magdalenka, Poland
  • Laboratory of Molecular Genome Organization, Institute of Farm Animal Genetics and Breeding, Russian Academy of Agricultural Science, Moskovskoye sh.55A, St.Petersburg-Pushkin 196601, Russia

Bibliografia

  • K. Boruszewska , M. Łukaszewicz , G. Zięba , A. Witkowski , J. Horbańczuk and K. Jaszczak ., 2009 – Microsatellite markers may be ineffective in selection of laying hens for polygenic production traits. Poultry Science 88, 932-937.
  • Cheng H.H., Levin I., Vallejo R.L., Khatib H., Dodgson J.B., Crittenden L.B.,Hillel J., 1995 – Development of a genetic map of the chicken with markers of high utility. Poultry Science 74, 1855–1874.
  • Groenen M.A.M., Crooijmans R.P.M.A., Veenendaal A., van Kaam J.B.C.H.M.,Vereijken A.L.J., van Arendonk J.A.M., van der Poel J.J., 1997 – QTL mapping in chicken using a three generation full sib family structure of an extreme broiler x broiler cross. Animal Biotechnology 8, 41-46.
  • Ikeobi C.O., Woolliams J.A., Morrice D.R., Law A., Windsor D., Burt D.W.,Hocking P.M., 2002 – Quantitative trait loci affecting fatness in the chicken. Animal Genetics 33, 428-435.
  • KAWKA M., HORBAŃCZUK J., JASZCZAK K., PIERZCHAŁA M., COOPER R.G., 2012 – A search for genetic markers associated with egg production in the ostrich (Struthio camelus).Molecular Biology Reports 39, 7881-7885.
  • Lipkin E., Fulton J., Cheng H., Yonash N., Soller M., 2002 – Quantitative trait locus mapping in chickens by selective DNA pooling with dinucleotide microsatellite markers by using purified DNA and fresh or frozen red blood cells as applied to marker-assisted selection. PoultryScience 81, 283-292.
  • Ponomarenko J.V., Orlova G.V., Merkulova T.I., Gorshkova E.V., Fokin O.N.,Vasiliev G.V., Frolov A.S., Ponomarenko M.P., 2002 – rSNP_Guide: an integrated database-tools system for studying SNPs and site-directed mutations in transcription factor binding sites. Human Mutations 20, 239-248.
  • Sazanov A.A., Romanov M.N., Wardęcka B., Sazanova A.L., KAWKA M., HORBAŃCZUK J.O., JASZCZAK K., PIERZCHAŁA M., COOPER R.G., 2012 – A search for genetic markers associated with egg production in the ostrich (Struthio camelus). Molecular Biology Reports 39, 7881-7885.
  • Korczak M., Stekol ’nikova V.A., Kozyreva A.A, Smirnov A.F., Jaszczak K.,Dodgson J.B., 2005 – Chromosomal localization of fifteen large insert BAC clones containing three microsatellites on chicken chromosome 4 (GGA4) which refine its centromere position. Animal Genetics 36, 161-163.
  • Sazanov A.A., Stekol ’nikova V.A., Korczak M., Sazanova A.L., Jaszczak K.,Zieba G., Malewski T., 2007 – Expression of positional candidates for shell thickness in the chicken. Poultry Science 87, 202-205.
  • Tatsuda K., Fujinaka K., 2001 – Genetic mapping of QTL affecting body weight in chickens using a F2 family. British Poultry Science 42, 333-337.
  • Tuiskula -Haavisto M., Honkatukia M., Vikki J., De Konig D., Schulman N.,Maki -Tanila A., 2002 – Mapping of quantitative trait loci affecting quality and production traits in eggs layers. Poultry Science 81, 919 - 927.
  • Vallejo R.L., Bacon L.D., Liu H.C., Witter R.L., Groenen M.A.M., Hillel J., Cheng H.H., 1998 – Genetic mapping of quantitative trait loci affecting susceptibility to Marek’s disease virus induced tumors in F2 intercross chickens. Genetics 148, 349-360.
  • van Kaam J.B.C.H.M., van Arendonk J.A.M., Groenen M.A.M., Bovenhuis H.,Vereijken A.L.J., Crooijmans R.P.M.A., van der Poel J.J., Veenendaal A., 1998 – Whole genome scan in chickens for quantitative trait loci affecting body weight in chickens using a three generation design. Livestock Production Science 54, 133-150.
  • van Kaam J.B.C.H.M., Groenen M.A.M., Bovenhuis H., Veenendaal A., Vereijken A.L.J., Van Arendonk J.A.M., 1999 – Whole genome scan in chickens for quantitative trait loci affecting growth and feed efficiency. Poultry Science 78, 15-23.
  • Wardecka B., Olszewski R., Jaszczak K., Zieba C., Pierzchala M., Wicinska K.,2002 – Relationship between microsatellite marker alleles on chromosome 1-5 originating from the Rhode Island Red and green-legged Partrigenous breeds and egg production and quality traits in F2 mapping population. Journal of Applied Genetics 43, 319 - 329.
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Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

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