PL EN


Preferencje help
Widoczny [Schowaj] Abstrakt
Liczba wyników
2018 | 67 | 2 |

Tytuł artykułu

Genetic analysis method for Staphylococcus chromogenes associated with goat mastitis

Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
Mastitis in goats is mainly caused by coagulase-negative Staphylococcus (CNS). The identification methods for this group are based on evaluating the expression of phenotypic characteristics such as the ability to metabolize various substrates; however, this is disadvantageous as these methods are dependent on gene expression. In recent years, genotyping methods such as the Multiple Locus Variable-Number Tandem Repeat Analysis (MLVA) and gene identification have been useful for epidemiological study of several bacterial species. To develop a genotyping method, the genome sequence of Staphylococcus chromogenes MU970 was analysed. The analysis showed nine virulence genes described in Staphylococcus aureus. The MLVA was developed using four loci identified in the genome of S. chromogenes MU970. This genotyping method was examined in 23 strains of CNS isolated from goat mastitis. The rate of discrimination for MLVA was 0.8893, and the highest rates of discrimination per the index of Simpson and Hunter-Gaston were 0.926 and 0.968 for the locus 346_06, respectively. The virulence genes were present in all strains of S. chromogenes but not in other CNS. The genotyping method presented in this paper is a viable and easy method for typifying CNS isolates from mastitis cases in different regions and is an ideal mean of tracking this disease.

Słowa kluczowe

Wydawca

-

Rocznik

Tom

67

Numer

2

Opis fizyczny

p.171-180,fig.,ref.

Twórcy

  • Departamento de Medicina y Zootecnia de Rumiantes, Facultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autonoma de Mexico, Mexico
  • Departamento de Microbiología e Inmunología, Facultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autonoma de Mexico, Mexico
  • Departamento de Medicina y Zootecnia de Rumiantes, Facultad de Medicina Veterinaria y Zootecnia, Universidad Nacional Autonoma de Mexico, Mexico
  • Laboratorio de Microbiología Agropecuaria, Departamento de Produccion Agrícola y Animal, Universidad Autonoma Metropolitana, Mexico
  • Centro Nacional de Investigacion Disciplinaria- Microbiología Animal, Instituto Nacional de Investigaciones Forestales, Agrícolas y Pecuarias, Mexico
  • Laboratorio de Biología Molecular, Departamento de Produccion Agrícola y Animal, Universidad Autonoma Metropolitana, Mexico

Bibliografia

  • Becker K., C. Heilmann and G. Peters. 2014. Coagulase-negative staphylococci. Clin. Microbiol. Rev. 27: 870–925.
  • Benson G. 1999. Tandem repeats finder: a program to analyze DNA sequences. Nucleic Acids Res. 27: 573–580.
  • Bergonier D., R. De Cremoux, R. Rupp, G. Lagriffoul and X. Berthelot. 2003. Mastitis of dairy small ruminants. Vet. Res. 34: 689–716.
  • Bernal M. and M. Guzmán. 1984. The Disc Antibiogram. Standardization of the Kirby-Bauer technique (El Antibiograma de Discos. Normalización de la técnica de Kirby-Bauer). Biomédica 4: 112–121.
  • Cremonesi P., B. Castiglioni, G. Malferrari, I. Biunno, C. Vimercati, P. Moroni, S. Morandi and M. Luzzana. 2006. Improved method for rapid extraction of mastitis pathogens directly from milk. J. Dairy. Sci. 89:168–169.
  • Fry P., M. Calcutt, M. Foecking, H. Hsieh, D. Suntrup, J. Perry, G. Stewart and J. Middleton. 2014. Draft genome sequence of a Staphylococcus chromogenes strain MU 970, isolated from a case of chronic bovine mastitis. Genome Announc. 2:e00835-14. doi:10.1128/genomeA.00835-14.
  • Hardy J., D. Ussery, B. Oppenheim and P. Hawkey. 2004. Distribution and characterization of staphylococcal interspersed repeat units (SIRUs) and potential use for strain differentiation. Microbiol. 150: 4045–4052.
  • Haveri M., A. Roslöf, L. Rantala and S. Pyörälä. 2007. Virulence genes of bovine Staphylococcus aureus from persistent and nonpersistent intramammary infections with different clinical characteristics. J. Appl. Microbiol. 103: 993–1000.
  • Hollender D., S. Conde, E. Salustio and L. Samartino. 2013. Detección de un complejo clonal con el genotipo de Brucella abortus biovariedad 2 como fundador de aislamientos de B. abortus en argentina. Rev. Argent. Microbiol. 45: 229–239.
  • Hunter P. and M. Gaston. 1988. Numerical index of the discriminatory ability of typing systems; an application of Simpson’s index of diversity. J. Clin. Microbiol. 26: 2465–2466.
  • Ikawaty R., J. Rob, T. Adrienne and J. Verhoef. 2008. Novel multiple-locus variable-number tandem-repeat analysis method for rapid molecular typing of human Staphylococcus aureus. J. Clin. Microbiol. 46: 3147–3151.
  • Le Fleche P., Y. Hauck, L. Onteniente, A. Prieur, F. Denoeud,V. Ramisse, P. Sylvestre, G. Benson, F. Ramisse and G. Vergnaud. 2001. Tandem repeats database for bacterial genomes: applicationto the genotyping of Yersinia pestis and Bacillus anthracis. BMC Microbiology. doi: 10.1186/1471-2180-1-2.
  • Mason W., J. Blevins, K. Beenken, N. Wibowo, N. Ojha andM. Smelter. 2001. Multiplex PCR protocol for the diagnosis of staphylococcal infection. J. Clin. Microbiol. 39: 3332–3338.
  • Monir S., H. Ihara, M. Noda, S. Xiao, P. Hong, K. Ohkusu and Y. Kawamura. 2007. DNAJ gene sequence-based assay for species identification and phylogenetic grouping in the genus Staphylococcus. Int. J. Syst. Evol. Microbiol. 57: 25–30.
  • Park Y., L. Fox, K. Seo. M. McGuire, Y. Park. F. Rurangirwa,W. Sischo and G. Bohach. 2011. Detection of Classical and Newly Described Staphylococcal Superantigen Genes in Coagulase-Negative Staphylococci Isolated from Bovine Intramammary Infections. Vet. Microbiol. 147: 149–154.
  • Pyörälä S. and S. Taponen. 2009. Coagulase-Negative Staphylococci-Emerging Mastitis Pathogens. Vet. Microbiol. 134: 3–8.
  • Ramisse V., P. Houssu, E. Hernández, F. Denoeud, V. Hilaire,O. Lisanti, F. Ramisse, D. Cavallo and G. Vergnaud. 2004. Variable number of tandem repeats in Salmonella entérica subsp. enterica for typing purposes. J. Clin. Microbiol. 42: 5722–5730.
  • Ruiz-Romero R., R. Cervantes-Olivares, D. Martínez-Gómez, A. Ducoing-Watty and L. Hernández-Andrade. 2013. Mostfrequent bacteria isolated from goats’ milk in two farms locatedin Tequisquiapan Querétaro, México. (Principales géneros bacterianos aislados de leche de cabra en dos granjas del municipio de Tequisquiapan, Querétaro, México). Rev. Mex. Cienc. Pecu. 4: 93–106.
  • Sampaio S., S. Simoes, E. Zuniga, P. Melville. A. Bispo, G. Carvalho, F.Gregori and B. Roberti. 2015. Virulence factor genes of Staphylococcus spp. isolated from caprine subclinical mastitis. Microb. Pathog. 85: 35–39.
  • Shimizu A., W. Kloos, H. Berkhoff, C. George and D. Ballard. 1997. Pulsed-field electrophoresis of Staphylococcus hyicus and Staphylococcus chromogenes genomic DNA and its taxonomic, epidemiologic and ecologic applications in veterinary medicine. J. Vet. Med. Sci. 59: 443–450.
  • Schukken Y., R. González., L. Tifosky, H. Schulte, C. Santisteban, F. Welcome. G. Bennet, M. Zurakowski and R. Zadoks. 2009. CNS mastitis: nothing to worry about? Vet. Microbiol.134: 9–14.
  • Stepanovic S., T. Hauschild, L. Dakic, Z. Al-Doori, M. Svabic-Vlahovic, L. Ranin and D. Morrison. 2006. Evaluation of phenotypic and molecular methods for detection of oxacillin resistence in members of the Staphylococcus sciuri Group. J. Clin. Microbiol. 44: 934–937.
  • Supré K., F. Haesebrouck, R. Zadoks, M. Vaneechoutte, S. Piepes and S. De Vliegher. 2011.Some Coagulase-Negative Staphylococcus Species Affect Udder Health More Than Others. J. Dairy Sci. 94: 2329–2340.
  • Taponen S. and S. Pyörälä. 2009. Coagulase-negative staphylococci as cause of bovine mastitis: not so different from Staphylococcus aureus? Vet. Microbiol. 34: 29–36.
  • Taylor J. and F. Breden. 2000. Slipped-strand mispairing and noncontiguous repeats in Poecilia reticulata a model for minisatelitte birth. Genetics 155: 1313–1320.
  • Thordberg M., I. Kühn, F. Moller, B. Brandstrom, P. Jonsson and M. Danielson-Tham. 2006. Pheno-and genotyping of Staphylococcus epidermidis isolated from bovine milk and human skin. Vet. Microbiol. 115: 163–172.
  • Van Belkum A., S. Scherer, L. Van Alphen and H. Verbrough. 1998. Short-sequence DNA repeats in prokaryotic genomes. Microbiol. Mol. Biol. Rev. 62: 275–293.
  • Vanderhaeghem W., S. Piepers, F. Leroy, E. Van Coillie, F. Haese-brouck and S. De Vliegher. 2015. Identification, typing, ecology and epidemiology of coagulase negative Staphylococci associated with ruminants. Vet. J. 203: 44–51.
  • Vergnaud G. and C. Pourcel. 2009. Multiple locus variable number of tandem repeats analysis. molecular epidemiology of microorganisms. Methods Mol. Biol. 551:141–58.
  • Vilchez G. and G. Alonso. 2009. Alcances y limitaciones de los métodos de epidemiología molecular basados en el análisis de ácidos nucléicos. Rev. Soc. Ven. Microbiol. 29: 6–12.
  • Vogler A., C. Keys, Y. Nemoto, R. Colman, Z. Jay and P. Keim. 2006. Effect of repeats copy number on variable number tandem repeatmutations in Escherichia coli O157:H7. J. Bacteriol. 188: 4253–4263.
  • Wang H., B. Diao, Z. Cui, M. Yan and B. Kan. 2016. Genotyping of Salmonella Typhi using 8 loci multi locus VNTR analysis. Gut. Pathog. 8:14. doi: 10.1186/s13099-016-0094-4.
  • Zadocks R., and J. L. Watts. 2009. Species Identification of coagulase-negative staphylococci: genotyping is superior to phenotyping. Vet. Microbiol. 134: 20–28.
  • Zaluga J., P. Stragier, J. Van Vaerenberg, M. Maes and P. De Vos.2013. Multilocus variable number tandem repeats analysis (MLVA) distinguishes a clonal complex of Clavibacter michiganensis subsp. Michiganensis strains isolated from recent outbreaks of bacterial wilt and canker in Belgium. BMC Microbiol. 13:126. doi: 10.1186/1471-2180-13-126.

Typ dokumentu

Bibliografia

Identyfikatory

Identyfikator YADDA

bwmeta1.element.agro-77b0878e-2af3-4c03-b6e0-0f5147a67e6d
JavaScript jest wyłączony w Twojej przeglądarce internetowej. Włącz go, a następnie odśwież stronę, aby móc w pełni z niej korzystać.