Transcriptome response to phosphorus starvation in rice

• Autorzy: Cai H. , Xie W. , Zhu T. , Lian X.
• Języki publikacji: EN

Abstrakty

EN

Phosphorus (P) is an essential mineral nutrient required for the plant growth and development. Insufficient P supply triggers extensive physiological and biochemical changes in plants. In this study, we used Affymetrix GeneChip rice genome arrays to analyze the dynamics of rice transcriptome under P starvation. Phosphorus starvation induced or suppressed transcription of 2,317 genes, representing 7.2% of the genes. These changes, mostly transient, affected various cellular metabolic pathways including stress response, primary and secondary metabolism, molecular transport, regulatory process and organismal development. Hundred and thirty (5.6% of 2,317 genes) transcripts were expressed similarly both in root and shoot under P starvation. Comparative analysis between rice and Arabidopsis identified 37 orthologous groups that responded to P starvation demonstrating the existence of conserved P stress coupling mechanism among dicot and monocot plants. Additional analysis of transcription profiles of microRNAs revealed differential expression of miR399 and miR169 under P starvation suggesting their potential roles in plant nutrient homeostasis. Analysis of genome-wide gene expression profiles in P starvation in rice shoot and root, using Affymetrix Rice Genome Chip in this paper, has provided an overview of transcriptional responses to the P starvation condition. This will bring very valuable information and will make a great contribution for investigating the response of rice to P starvation.

• Wydawca: -
• Czasopismo: Acta Physiologiae Plantarum
• Rocznik: 2012
• Tom: 34
• Numer: 1
• Opis fizyczny: p.327-341,fig.,ref.

Twórcy

autor

Cai H.

• National Key Laboratory of Crop Genetic Improvement, Hanzhong Agricultural University, 430070 Wuhan, China
• Microelement Research Center, College of Resources and Environment, Huazhong Agricultural University, 430070 Wuhan, China

autor

Xie W.

• National Key Laboratory of Crop Genetic Improvement, Hanzhong Agricultural University, 430070 Wuhan, China

autor

Zhu T.

• Syngeta Biotechnology Inc., 3054 Cornwallis Road, Research Triangle Park, NC 27709, USA

autor

Lian X.

• National Key Laboratory of Crop Genetic Improvement, Hanzhong Agricultural University, 430070 Wuhan, China

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