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2013 | 48 | 1 |

Tytuł artykułu

The unusual Gasteromycetes Lycogalopsis solmsii belongs to the gomphoid-phalloid group

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Warianty tytułu

Języki publikacji

EN

Abstrakty

EN
The rare tropical Gasteromycetes Lycogalopsis solmsii has been found twice at thirty years interval in the Singapore Botanic Gardens. From the most recent find a culture could be isolated, which allowed DNA extraction and sequencing of about 2000 bp from the nuclear ribosomal DNA. Comparison to a large sample of Basidiomycetes was only possible for a part of the large ribosomal subunit, but clearly indicated affiliation to the gomphoid-phalloid group, without any relationship to Lycoperdales or Agaricales, as stated in the Dictionary of the Fungi.

Wydawca

-

Czasopismo

Rocznik

Tom

48

Numer

1

Opis fizyczny

p.13-20,fig.,ref.

Twórcy

autor
  • Phylogenomique des Eucaryotes, Departement des Sciences de la Vie, Institut de Botanique, B22 Universite de Liege, B-4000 Liege, Belgium
autor
  • Phylogenomique des Eucaryotes, Departement des Sciences de la Vie, Institut de Botanique, B22 Universite de Liege, B-4000 Liege, Belgium
  • Phylogenomique des Eucaryotes, Departement des Sciences de la Vie, Institut de Botanique, B22 Universite de Liege, B-4000 Liege, Belgium
autor
  • Phylogenomique des Eucaryotes, Departement des Sciences de la Vie, Institut de Botanique, B22 Universite de Liege, B-4000 Liege, Belgium

Bibliografia

  • Ainsworth G.C., Bisby G.R. 1954. A Dictionary of the Fungi. 4th Edition. The Commonwealth Mycological Institute, Kew.
  • Ainsworth G.C., James P.W., Hawksworth D.L. 1971. Ainsworth & Bisby’s Dictionary of the Fungi. 6th Edition. C.A.B., Commonwealth Mycological Institute, Kew.
  • Altschul S.F. et al. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25: 3389-3402.
  • Benson D.A. et al. 2013. GenBank. Nucleic Acids Res. 41: D36-42.
  • Castellano M.A., Beever R.E. 1994. Truffle-like Basidiomycotina of New Zealand: Gallacea, Hysterangium, Phallobata and Protubera. New Zealand J. Bot. 32: 305-328. http://dx.doi.org/10.1080%2F0028825X.1994.10410473
  • Castresana J. 2000. Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis. Mol. Biol. Evol. 17: 540-552. http://dx.doi.org/10.1093%2Foxfordjournals.molbev.a026334
  • Demoulin V., Dring D.M. 1975. Gasteromycetes of Kivu (Zaïre), Rwanda and Burundi. Bull. Jard. Bot. Nat. Belgique 45: 339-372.
  • Federhen S. 2012. The NCBI Taxonomy database. Nucleic Acids Res. 40: D136-D143.
  • Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791. http://dx.doi.org/10.2307%2F2408678
  • Fischer E. 1886. Lycogalopsis solmsii, ein neuer Gastromycet. Ber. Deutschen Bot. Ges. 4: 192-197.
  • Fischer E. 1933. Gastomyceteae. (In:) A. E. Engler (ed.). Die natürlichen Pflanzenfamilien, ed. 2, 7a. W. Engelmann, Leipzig.
  • Giachini A.J., Hosaka K., Nouhrac E., Spatafora J., Trappe J. 2010. Phylogenetic relationships of the Gomphales based on nuc-25S-rDNA, mit-12S-rDNA, and mit-atp6-DNA combined sequences. Fungal Biol. 114: 224-234. http://dx.doi.org/10.1016%2Fj.funbio.2010.01.002
  • Guindon S. et al. 2010. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst. Biol. 59: 307-321.
  • Hawksworth D.L. Sutton B.C., Ainsworth G.C. 1983. Ainsworth & Bisby’s Dictionary of the Fungi. 7th Edition. C.A.B., Commonwealth Mycological Institute, Kew.
  • Hawksworth D.L., Kirk P.M., Sutton B.C., Pegler D.N. 1995. Ainsworth & Bisby’s Dictionary of the Fungi. 8th Edition. C.A.B, International Mycological Institute, Egham.
  • Holmgren P.K., Holmgren N.H., Barnett L.C. 1990. Index Herbariorum. I: The Herbaria of the World. 8th Edition. New York Botanical Garden, Bronx, New York.
  • Hosaka K. 2005. Systematics, Phylogeny, and Biogeography of the Hysterangiales and Related Taxa (Phallomycetidae, Homobasidiomycetes). PhD, Oregon State University, Corvallis, Oregon.
  • Hosaka K. et al. 2007 (“2006”). Molecular phylogenetics of the gomphoid-phalloid fungi with an establishment of the new subclass Phallomycetidae and two new orders. Mycologia 98: 949-959.
  • Katoh K. et al. 2005. MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Res. 33: 511-518.
  • Kirk M.P., Cannon P.F., David J.C., Stalpers J.A. 2001. Ainsworth & Bisby’s Dictionary of the Fungi. 9th Edition. CAB International, Wallingford.
  • Kirk M.P., Cannon P.F., Minter D.W., Stalpers J.A. 2008. Ainsworth & Bisby’s Dictionary of the Fungi. 10th Edition. Wallingford: CABI.
  • Lanave C. et al. 1984. A new method for calculating evolutionary substitution rates. J. Mol. Evol. 20: 86-93.
  • Martin G.W. 1939. The genus “Lycogalopsis”. Lilloa 4: 69-73.
  • Moncalvo J.M., Wang H.-H., Hseu R.-Sh. 1995. Phylogenetic relationships in Ganoderma inferred from the internal transcribed spacers and 25S ribosomal DNA sequences. Mycologia 87: 223-238.
  • http://dx.doi.org/10.2307%2F3760908
  • Patouillard N. 1902. Champignons de la Guadeloupe recueillis par le R. P. Duss (3ème série). Bull. Soc. Mycol. France 18: 171-186.
  • Philippe H. 1993. MUST, a computer package of Management Utilities for Sequences and Trees. Nucleic Acids Res. 21: 5264-5272.
  • Quast C. et al. 2013. The SILVA ribosomal RNA gene database project: improved data processing and web-based tools. Nucleic Acids Res. 41: 590-596.
  • Smith J., Blanchette R.A., Newcombe E. 2004. Molecular and morphological characterization of the willow rust fungus, Melampsora epitea from arctic and temperate hosts in North America. Mycologia 96: 1330-1338. http://dx.doi.org/10.2307%2F3762149
  • Vilgalys R., Hester M. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J. Bact. 172: 4238-4246.
  • Yang Z. 1993. Maximum-likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites. Mol. Biol. Evol. 10: 1396-1401.

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Bibliografia

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